RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 SLC27A3Q5K4L6 730 aa16.54■□□□□ 0.24
CHFR-221ENST00000542714 NLRP10Q86W26 655 aa16.54■□□□□ 0.24
CHFR-221ENST00000542714 PROM2Q8N271 834 aa16.54■□□□□ 0.24
CHFR-221ENST00000542714 HDAC5Q9UQL6 1122 aa16.54■□□□□ 0.24
CHFR-221ENST00000542714 GPTP24298 496 aa16.53■□□□□ 0.24
CHFR-221ENST00000542714 RGS3P49796 1198 aa16.53■□□□□ 0.24
CHFR-221ENST00000542714 TXNRD1Q16881 649 aa16.53■□□□□ 0.24
CHFR-221ENST00000542714 NPM2Q86SE8 214 aaKnown RBP16.53■□□□□ 0.24
CHFR-221ENST00000542714 CHD1LQ86WJ1 897 aa16.53■□□□□ 0.24
CHFR-221ENST00000542714 SRGAP3O43295 1099 aa16.52■□□□□ 0.24
CHFR-221ENST00000542714 PCCAP05165 728 aaPredicted RBP16.52■□□□□ 0.24
CHFR-221ENST00000542714 FOXO4P98177 505 aa16.52■□□□□ 0.24
CHFR-221ENST00000542714 RABL6Q3YEC7 729 aaPredicted RBP16.52■□□□□ 0.24
CHFR-221ENST00000542714 ANKRD45Q5TZF3 282 aa16.52■□□□□ 0.24
CHFR-221ENST00000542714 PLSCR1O15162 318 aa16.51■□□□□ 0.23
CHFR-221ENST00000542714 LNPKQ9C0E8 428 aa16.51■□□□□ 0.23
CHFR-221ENST00000542714 BCL2L12Q9HB09 334 aa16.51■□□□□ 0.23
CHFR-221ENST00000542714 EXOC6BQ9Y2D4 811 aa16.51■□□□□ 0.23
CHFR-221ENST00000542714 RGL2O15211 777 aa16.5■□□□□ 0.23
CHFR-221ENST00000542714 APBA3O96018 575 aa16.5■□□□□ 0.23
CHFR-221ENST00000542714 RTL5Q5HYW3 569 aaPredicted RBP16.5■□□□□ 0.23
CHFR-221ENST00000542714 ILDR1Q86SU0 546 aaPredicted RBP16.5■□□□□ 0.23
CHFR-221ENST00000542714 ZBTB38Q8NAP3 1195 aaPredicted RBP16.5■□□□□ 0.23
CHFR-221ENST00000542714 AK7Q96M32 723 aa16.5■□□□□ 0.23
CHFR-221ENST00000542714 SRP68Q9UHB9 627 aaKnown RBP16.5■□□□□ 0.23
CHFR-221ENST00000542714 RTCBQ9Y3I0 505 aaKnown RBP16.5■□□□□ 0.23
CHFR-221ENST00000542714 CDHR2Q9BYE9 1310 aa16.49■□□□□ 0.23
CHFR-221ENST00000542714 SMARCA5O60264 1052 aaPredicted RBP16.49■□□□□ 0.23
CHFR-221ENST00000542714 SYNE4Q8N205 404 aa16.49■□□□□ 0.23
CHFR-221ENST00000542714 ARHGEF1Q92888 912 aaKnown RBP16.49■□□□□ 0.23
CHFR-221ENST00000542714 NARFQ9UHQ1 456 aa16.49■□□□□ 0.23
CHFR-221ENST00000542714 RFX5P48382 616 aaPredicted RBP16.48■□□□□ 0.23
CHFR-221ENST00000542714 SUSD4Q5VX71 490 aa16.48■□□□□ 0.23
CHFR-221ENST00000542714 FAM89AQ96GI7 184 aa16.48■□□□□ 0.23
CHFR-221ENST00000542714 PLA2G12BQ9BX93 195 aa16.48■□□□□ 0.23
CHFR-221ENST00000542714 NOP58Q9Y2X3 529 aaKnown RBP16.48■□□□□ 0.23
CHFR-221ENST00000542714 EP400Q96L91 3159 aa16.48■□□□□ 0.23
CHFR-221ENST00000542714 APBB1O00213 710 aa16.47■□□□□ 0.23
CHFR-221ENST00000542714 USPL1Q5W0Q7 1092 aa16.47■□□□□ 0.23
CHFR-221ENST00000542714 CLEC4GQ6UXB4 293 aa16.47■□□□□ 0.23
CHFR-221ENST00000542714 PA2G4Q9UQ80 394 aaKnown RBP16.47■□□□□ 0.23
CHFR-221ENST00000542714 ZNF652Q9Y2D9 606 aa16.47■□□□□ 0.23
CHFR-221ENST00000542714 USP42Q9H9J4 1324 aaKnown RBP16.46■□□□□ 0.23
CHFR-221ENST00000542714 SURF6O75683 361 aaKnown RBP16.46■□□□□ 0.23
CHFR-221ENST00000542714 PHF14O94880 888 aa16.46■□□□□ 0.23
CHFR-221ENST00000542714 NTSR2O95665 410 aa16.46■□□□□ 0.23
CHFR-221ENST00000542714 PARP10Q53GL7 1025 aa16.46■□□□□ 0.23
CHFR-221ENST00000542714 LMBR1LQ6UX01 489 aa16.46■□□□□ 0.23
CHFR-221ENST00000542714 TRMT112Q9UI30 125 aaKnown RBP16.46■□□□□ 0.23
CHFR-221ENST00000542714 NIP7Q9Y221 180 aaKnown RBP eCLIP16.46■□□□□ 0.23
CHFR-221ENST00000542714 RAB11FIP3O75154 756 aa16.45■□□□□ 0.22
CHFR-221ENST00000542714 ADRA2BP18089 450 aa16.45■□□□□ 0.22
CHFR-221ENST00000542714 ZNF827Q17R98 1081 aa16.45■□□□□ 0.22
CHFR-221ENST00000542714 TRAPPC3LQ5T215 181 aa16.45■□□□□ 0.22
CHFR-221ENST00000542714 TBC1D9BQ66K14 1250 aa16.45■□□□□ 0.22
CHFR-221ENST00000542714 C16orf71Q8IYS4 520 aaPredicted RBP16.45■□□□□ 0.22
CHFR-221ENST00000542714 OTUD7AQ8TE49 926 aaPredicted RBP16.45■□□□□ 0.22
CHFR-221ENST00000542714 QSER1Q2KHR3 1735 aa16.45■□□□□ 0.22
CHFR-221ENST00000542714 SSFA2P28290 1259 aa16.44■□□□□ 0.22
CHFR-221ENST00000542714 KLHDC4Q8TBB5 520 aa16.44■□□□□ 0.22
CHFR-221ENST00000542714 AKT1S1Q96B36 256 aa16.44■□□□□ 0.22
CHFR-221ENST00000542714 UTP14AQ9BVJ6 771 aaKnown RBP16.44■□□□□ 0.22
CHFR-221ENST00000542714 LRRCC1Q9C099 1032 aa16.44■□□□□ 0.22
CHFR-221ENST00000542714 COPRSQ9NQ92 184 aa16.44■□□□□ 0.22
CHFR-221ENST00000542714 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.43■□□□□ 0.22
CHFR-221ENST00000542714 IRS4O14654 1257 aaPredicted RBP16.43■□□□□ 0.22
CHFR-221ENST00000542714 ZPR1O75312 459 aa16.43■□□□□ 0.22
CHFR-221ENST00000542714 CSF1RP07333 972 aa16.43■□□□□ 0.22
CHFR-221ENST00000542714 PTPN12Q05209 780 aaKnown RBP16.43■□□□□ 0.22
CHFR-221ENST00000542714 PLEKHM2Q8IWE5 1019 aa16.43■□□□□ 0.22
CHFR-221ENST00000542714 RHPN1Q8TCX5 695 aa16.43■□□□□ 0.22
CHFR-221ENST00000542714 TSHZ2Q9NRE2 1034 aa16.43■□□□□ 0.22
CHFR-221ENST00000542714 LRP5O75197 1615 aa16.43■□□□□ 0.22
CHFR-221ENST00000542714 SH3TC1Q8TE82 1336 aa16.43■□□□□ 0.22
CHFR-221ENST00000542714 SALL3Q9BXA9 1300 aa16.43■□□□□ 0.22
CHFR-221ENST00000542714 SPEF2Q9C093 1822 aa16.42■□□□□ 0.22
CHFR-221ENST00000542714 FAM177BA6PVY3 158 aa16.42■□□□□ 0.22
CHFR-221ENST00000542714 RFC4P35249 363 aa16.42■□□□□ 0.22
CHFR-221ENST00000542714 HSP90AB4PQ58FF6 505 aa16.42■□□□□ 0.22
CHFR-221ENST00000542714 CAMKK2Q96RR4 588 aa16.42■□□□□ 0.22
CHFR-221ENST00000542714 TNRC6CQ9HCJ0 1690 aaKnown RBP16.41■□□□□ 0.22
CHFR-221ENST00000542714 SASH1O94885 1247 aa16.41■□□□□ 0.22
CHFR-221ENST00000542714 CTSWP56202 376 aa16.41■□□□□ 0.22
CHFR-221ENST00000542714 BICDL1Q6ZP65 573 aa16.41■□□□□ 0.22
CHFR-221ENST00000542714 KIF1BPQ96EK5 621 aa16.41■□□□□ 0.22
CHFR-221ENST00000542714 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.41■□□□□ 0.22
CHFR-221ENST00000542714 PDE8AO60658 829 aa16.4■□□□□ 0.22
CHFR-221ENST00000542714 HMGB2P26583 209 aaKnown RBP16.4■□□□□ 0.22
CHFR-221ENST00000542714 EZH2Q15910 746 aaKnown RBP16.4■□□□□ 0.22
CHFR-221ENST00000542714 FAM161AQ3B820 660 aa16.4■□□□□ 0.22
CHFR-221ENST00000542714 TTLL11Q8NHH1 800 aa16.4■□□□□ 0.22
CHFR-221ENST00000542714 SIL1Q9H173 461 aa16.4■□□□□ 0.22
CHFR-221ENST00000542714 IL1RAPL2Q9NP60 686 aa16.4■□□□□ 0.22
CHFR-221ENST00000542714 ZBTB47Q9UFB7 747 aaPredicted RBP16.4■□□□□ 0.22
CHFR-221ENST00000542714 CHMP3Q9Y3E7 222 aa16.4■□□□□ 0.22
CHFR-221ENST00000542714 COL4A1P02462 1669 aa16.4■□□□□ 0.22
CHFR-221ENST00000542714 ABCC12Q96J65 1359 aa16.39■□□□□ 0.21
CHFR-221ENST00000542714 HCLS1P14317 486 aaPredicted RBP16.39■□□□□ 0.21
CHFR-221ENST00000542714 EN1Q05925 392 aaPredicted RBP16.39■□□□□ 0.21
CHFR-221ENST00000542714 G3BP1Q13283 466 aaKnown RBP eCLIP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms