RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 CASP7P55210 303 aa13.61□□□□□ -0.23
SCG3-202ENST00000542355 ISCA1Q9BUE6 129 aa13.61□□□□□ -0.23
SCG3-202ENST00000542355 IL1RAPL2Q9NP60 686 aa13.61□□□□□ -0.23
SCG3-202ENST00000542355 PA2G4Q9UQ80 394 aaKnown RBP13.61□□□□□ -0.23
SCG3-202ENST00000542355 KCNQ4P56696 695 aa13.61□□□□□ -0.23
SCG3-202ENST00000542355 OS9Q13438 667 aaPredicted RBP13.61□□□□□ -0.23
SCG3-202ENST00000542355 HSP90AB4PQ58FF6 505 aa13.61□□□□□ -0.23
SCG3-202ENST00000542355 GIGYF2Q6Y7W6 1299 aaKnown RBP13.61□□□□□ -0.23
SCG3-202ENST00000542355 DZIP3Q86Y13 1208 aaKnown RBP13.61□□□□□ -0.23
SCG3-202ENST00000542355 RHPN1Q8TCX5 695 aa13.61□□□□□ -0.23
SCG3-202ENST00000542355 NOP58Q9Y2X3 529 aaKnown RBP13.61□□□□□ -0.23
SCG3-202ENST00000542355 EIF5P55010 431 aaKnown RBP13.6□□□□□ -0.23
SCG3-202ENST00000542355 KIF1BPQ96EK5 621 aa13.6□□□□□ -0.23
SCG3-202ENST00000542355 THSD7AQ9UPZ6 1657 aa13.6□□□□□ -0.23
SCG3-202ENST00000542355 ANP32AP39687 249 aaKnown RBP13.59□□□□□ -0.23
SCG3-202ENST00000542355 TRIM28Q13263 835 aaKnown RBP13.59□□□□□ -0.23
SCG3-202ENST00000542355 GSPT1P15170 499 aaKnown RBP13.59□□□□□ -0.23
SCG3-202ENST00000542355 TTC22Q5TAA0 569 aa13.59□□□□□ -0.23
SCG3-202ENST00000542355 KLHDC4Q8TBB5 520 aa13.59□□□□□ -0.23
SCG3-202ENST00000542355 ARFGEF2Q9Y6D5 1785 aa13.59□□□□□ -0.23
SCG3-202ENST00000542355 GPTP24298 496 aa13.58□□□□□ -0.24
SCG3-202ENST00000542355 PDE1AP54750 535 aa13.58□□□□□ -0.24
SCG3-202ENST00000542355 ERVV-1B6SEH8 477 aa13.58□□□□□ -0.24
SCG3-202ENST00000542355 G3BP1Q13283 466 aaKnown RBP eCLIP13.58□□□□□ -0.24
SCG3-202ENST00000542355 RABL6Q3YEC7 729 aaPredicted RBP13.58□□□□□ -0.24
SCG3-202ENST00000542355 HSP90AB3PQ58FF7 597 aa13.58□□□□□ -0.24
SCG3-202ENST00000542355 LMBR1LQ6UX01 489 aa13.58□□□□□ -0.24
SCG3-202ENST00000542355 LINC00116Q8NCU8 138 aa13.58□□□□□ -0.24
SCG3-202ENST00000542355 SIL1Q9H173 461 aa13.58□□□□□ -0.24
SCG3-202ENST00000542355 MX1P20591 662 aa13.57□□□□□ -0.24
SCG3-202ENST00000542355 FOXO4P98177 505 aa13.57□□□□□ -0.24
SCG3-202ENST00000542355 TSHZ3Q63HK5 1081 aa13.57□□□□□ -0.24
SCG3-202ENST00000542355 NUTM1Q86Y26 1132 aa13.57□□□□□ -0.24
SCG3-202ENST00000542355 FAM89AQ96GI7 184 aa13.57□□□□□ -0.24
SCG3-202ENST00000542355 ARID3AQ99856 593 aa13.57□□□□□ -0.24
SCG3-202ENST00000542355 OSBPL3Q9H4L5 887 aa13.57□□□□□ -0.24
SCG3-202ENST00000542355 COL15A1P39059 1388 aa13.57□□□□□ -0.24
SCG3-202ENST00000542355 TJP1Q07157 1748 aa13.57□□□□□ -0.24
SCG3-202ENST00000542355 CHMP3Q9Y3E7 222 aa13.56□□□□□ -0.24
SCG3-202ENST00000542355 SALL3Q9BXA9 1300 aa13.56□□□□□ -0.24
SCG3-202ENST00000542355 NLRP10Q86W26 655 aa13.56□□□□□ -0.24
SCG3-202ENST00000542355 ERC1Q8IUD2 1116 aa13.56□□□□□ -0.24
SCG3-202ENST00000542355 ZBTB38Q8NAP3 1195 aaPredicted RBP13.56□□□□□ -0.24
SCG3-202ENST00000542355 CLASRPQ8N2M8 674 aaKnown RBP13.55□□□□□ -0.24
SCG3-202ENST00000542355 NUP188Q5SRE5 1749 aa13.55□□□□□ -0.24
SCG3-202ENST00000542355 SASH1O94885 1247 aa13.55□□□□□ -0.24
SCG3-202ENST00000542355 PCCAP05165 728 aaPredicted RBP13.55□□□□□ -0.24
SCG3-202ENST00000542355 SDSP20132 328 aa13.55□□□□□ -0.24
SCG3-202ENST00000542355 RFX5P48382 616 aaPredicted RBP13.55□□□□□ -0.24
SCG3-202ENST00000542355 PTPN12Q05209 780 aaKnown RBP13.55□□□□□ -0.24
SCG3-202ENST00000542355 ZNF772Q68DY9 489 aaPredicted RBP13.55□□□□□ -0.24
SCG3-202ENST00000542355 KRT27Q7Z3Y8 459 aa13.55□□□□□ -0.24
SCG3-202ENST00000542355 UPF2Q9HAU5 1272 aaKnown RBP13.55□□□□□ -0.24
SCG3-202ENST00000542355 COPRSQ9NQ92 184 aa13.55□□□□□ -0.24
SCG3-202ENST00000542355 CCNL1Q9UK58 526 aaPredicted RBP13.55□□□□□ -0.24
SCG3-202ENST00000542355 MFAP1P55081 439 aaKnown RBP13.54□□□□□ -0.24
SCG3-202ENST00000542355 SYNE4Q8N205 404 aa13.54□□□□□ -0.24
SCG3-202ENST00000542355 STAP2Q9UGK3 403 aa13.54□□□□□ -0.24
SCG3-202ENST00000542355 CAMTA2O94983 1202 aa13.54□□□□□ -0.24
SCG3-202ENST00000542355 TBC1D9Q6ZT07 1266 aa13.54□□□□□ -0.24
SCG3-202ENST00000542355 ZNF34Q8IZ26 560 aa13.54□□□□□ -0.24
SCG3-202ENST00000542355 BCL11BQ9C0K0 894 aaPredicted RBP13.54□□□□□ -0.24
SCG3-202ENST00000542355 TRMT112Q9UI30 125 aaKnown RBP13.54□□□□□ -0.24
SCG3-202ENST00000542355 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.54□□□□□ -0.24
SCG3-202ENST00000542355 AFDNP55196 1824 aaKnown RBP13.53□□□□□ -0.24
SCG3-202ENST00000542355 SMIM5Q71RC9 77 aa13.53□□□□□ -0.24
SCG3-202ENST00000542355 ZMYND15Q9H091 742 aa13.53□□□□□ -0.24
SCG3-202ENST00000542355 CDC45O75419 566 aa13.52□□□□□ -0.24
SCG3-202ENST00000542355 RBM6P78332 1123 aaKnown RBP13.52□□□□□ -0.24
SCG3-202ENST00000542355 FAM196AQ6ZSG2 479 aa13.52□□□□□ -0.24
SCG3-202ENST00000542355 UBN2Q6ZU65 1347 aa13.52□□□□□ -0.24
SCG3-202ENST00000542355 IFIT2P09913 472 aaKnown RBP13.52□□□□□ -0.25
SCG3-202ENST00000542355 AACSQ86V21 672 aa13.52□□□□□ -0.25
SCG3-202ENST00000542355 SPOCK2Q92563 424 aa13.52□□□□□ -0.25
SCG3-202ENST00000542355 CCDC85AQ96PX6 553 aaPredicted RBP13.52□□□□□ -0.25
SCG3-202ENST00000542355 CNTNAP4Q9C0A0 1308 aa13.52□□□□□ -0.25
SCG3-202ENST00000542355 FAM177BA6PVY3 158 aa13.51□□□□□ -0.25
SCG3-202ENST00000542355 IPO9Q96P70 1041 aaKnown RBP13.51□□□□□ -0.25
SCG3-202ENST00000542355 TRIM6-TRIM34B2RNG4 842 aa13.51□□□□□ -0.25
SCG3-202ENST00000542355 IRS4O14654 1257 aaPredicted RBP13.51□□□□□ -0.25
SCG3-202ENST00000542355 RC3H1Q5TC82 1133 aaKnown RBP13.51□□□□□ -0.25
SCG3-202ENST00000542355 SUSD4Q5VX71 490 aa13.51□□□□□ -0.25
SCG3-202ENST00000542355 EAF2Q96CJ1 260 aaPredicted RBP13.51□□□□□ -0.25
SCG3-202ENST00000542355 PLA2G12BQ9BX93 195 aa13.51□□□□□ -0.25
SCG3-202ENST00000542355 GNPATO15228 680 aa13.5□□□□□ -0.25
SCG3-202ENST00000542355 TRIM37O94972 964 aa13.5□□□□□ -0.25
SCG3-202ENST00000542355 CCDC57Q2TAC2 916 aa13.5□□□□□ -0.25
SCG3-202ENST00000542355 RILPL2Q969X0 211 aa13.5□□□□□ -0.25
SCG3-202ENST00000542355 ZNF594Q96JF6 807 aaPredicted RBP13.5□□□□□ -0.25
SCG3-202ENST00000542355 CCDC8Q9H0W5 538 aaPredicted RBP13.5□□□□□ -0.25
SCG3-202ENST00000542355 NIP7Q9Y221 180 aaKnown RBP eCLIP13.5□□□□□ -0.25
SCG3-202ENST00000542355 CDHR2Q9BYE9 1310 aa13.5□□□□□ -0.25
SCG3-202ENST00000542355 RPS6KA4O75676 772 aa13.49□□□□□ -0.25
SCG3-202ENST00000542355 TFCP2Q12800 502 aa13.49□□□□□ -0.25
SCG3-202ENST00000542355 PI4K2BQ8TCG2 481 aa13.49□□□□□ -0.25
SCG3-202ENST00000542355 TBC1D32Q96NH3 1257 aa13.49□□□□□ -0.25
SCG3-202ENST00000542355 ZNF652Q9Y2D9 606 aa13.49□□□□□ -0.25
SCG3-202ENST00000542355 NHSQ6T4R5 1651 aa13.49□□□□□ -0.25
SCG3-202ENST00000542355 AOX1Q06278 1338 aa13.49□□□□□ -0.25
SCG3-202ENST00000542355 CSF1RP07333 972 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms