RNA–Protein interactions for RNA: ENST00000542335.5

PDE1B-204, Transcript of phosphodiesterase 1B, humanhuman

TSL 2

Gene PDE1B, Length 2,782 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-204ENST00000542335 ARID3AQ99856 593 aa14.46□□□□□ -0.09
PDE1B-204ENST00000542335 AFDNP55196 1824 aaKnown RBP14.46□□□□□ -0.09
PDE1B-204ENST00000542335 UBAP1LF5GYI3 381 aa14.46□□□□□ -0.09
PDE1B-204ENST00000542335 NASPP49321 788 aaPredicted RBP14.46□□□□□ -0.09
PDE1B-204ENST00000542335 ZNF445P59923 1031 aa14.46□□□□□ -0.09
PDE1B-204ENST00000542335 BRD1O95696 1058 aa14.45□□□□□ -0.1
PDE1B-204ENST00000542335 CHRM1P11229 460 aaPredicted RBP14.45□□□□□ -0.1
PDE1B-204ENST00000542335 CLASRPQ8N2M8 674 aaKnown RBP14.45□□□□□ -0.1
PDE1B-204ENST00000542335 FMNL2Q96PY5 1086 aa14.45□□□□□ -0.1
PDE1B-204ENST00000542335 LSG1Q9H089 658 aaKnown RBP14.45□□□□□ -0.1
PDE1B-204ENST00000542335 OS9Q13438 667 aaPredicted RBP14.45□□□□□ -0.1
PDE1B-204ENST00000542335 PDIA6Q15084 440 aa14.45□□□□□ -0.1
PDE1B-204ENST00000542335 ARFGEF2Q9Y6D5 1785 aa14.45□□□□□ -0.1
PDE1B-204ENST00000542335 A0A0G2JS52 829 aa14.45□□□□□ -0.1
PDE1B-204ENST00000542335 GRM8O00222 908 aa14.45□□□□□ -0.1
PDE1B-204ENST00000542335 SNRPA1P09661 255 aaKnown RBP14.45□□□□□ -0.1
PDE1B-204ENST00000542335 GPATCH3Q96I76 525 aa14.45□□□□□ -0.1
PDE1B-204ENST00000542335 MAP4K4O95819 1239 aaPredicted RBP14.44□□□□□ -0.1
PDE1B-204ENST00000542335 ECHDC1Q9NTX5 307 aa14.44□□□□□ -0.1
PDE1B-204ENST00000542335 CCDC9Q9Y3X0 531 aaKnown RBP14.44□□□□□ -0.1
PDE1B-204ENST00000542335 CWF19L2Q2TBE0 894 aaKnown RBP14.44□□□□□ -0.1
PDE1B-204ENST00000542335 CCDC173Q0VFZ6 552 aa14.43□□□□□ -0.1
PDE1B-204ENST00000542335 ZSCAN30Q86W11 494 aa14.43□□□□□ -0.1
PDE1B-204ENST00000542335 PLCD3Q8N3E9 789 aa14.43□□□□□ -0.1
PDE1B-204ENST00000542335 GLI3P10071 1580 aa14.43□□□□□ -0.1
PDE1B-204ENST00000542335 RIC3Q7Z5B4 369 aa14.43□□□□□ -0.1
PDE1B-204ENST00000542335 SYTL4Q96C24 671 aaPredicted RBP14.43□□□□□ -0.1
PDE1B-204ENST00000542335 R3HCC1Q9Y3T6 440 aaKnown RBP14.43□□□□□ -0.1
PDE1B-204ENST00000542335 SNX14Q9Y5W7 946 aa14.43□□□□□ -0.1
PDE1B-204ENST00000542335 PHLPP1O60346 1717 aa14.42□□□□□ -0.1
PDE1B-204ENST00000542335 COPS6Q7L5N1 327 aa14.42□□□□□ -0.1
PDE1B-204ENST00000542335 RUFY2Q8WXA3 655 aa14.42□□□□□ -0.1
PDE1B-204ENST00000542335 KAZALD1Q96I82 304 aa14.42□□□□□ -0.1
PDE1B-204ENST00000542335 SUCLG2Q96I99 432 aa14.42□□□□□ -0.1
PDE1B-204ENST00000542335 FAM13BQ9NYF5 915 aa14.42□□□□□ -0.1
PDE1B-204ENST00000542335 AHDC1Q5TGY3 1603 aaPredicted RBP14.42□□□□□ -0.1
PDE1B-204ENST00000542335 XAGE3Q8WTP9 111 aa14.42□□□□□ -0.1
PDE1B-204ENST00000542335 TTC14Q96N46 770 aa14.42□□□□□ -0.1
PDE1B-204ENST00000542335 PPP1R9BQ96SB3 815 aa14.42□□□□□ -0.1
PDE1B-204ENST00000542335 UPF3BQ9BZI7 483 aaKnown RBP14.42□□□□□ -0.1
PDE1B-204ENST00000542335 OFD1O75665 1012 aa14.41□□□□□ -0.1
PDE1B-204ENST00000542335 ZSCAN23Q3MJ62 389 aa14.41□□□□□ -0.1
PDE1B-204ENST00000542335 ZNF830Q96NB3 372 aaPredicted RBP14.41□□□□□ -0.1
PDE1B-204ENST00000542335 BCCIPQ9P287 314 aaKnown RBP eCLIP14.41□□□□□ -0.1
PDE1B-204ENST00000542335 ERVV-2B6SEH9 535 aa14.41□□□□□ -0.1
PDE1B-204ENST00000542335 PRPF40AO75400 957 aaKnown RBP14.41□□□□□ -0.1
PDE1B-204ENST00000542335 IFIT2P09913 472 aaKnown RBP14.41□□□□□ -0.1
PDE1B-204ENST00000542335 GPT2Q8TD30 523 aa14.41□□□□□ -0.1
PDE1B-204ENST00000542335 CNKSR2Q8WXI2 1034 aa14.41□□□□□ -0.1
PDE1B-204ENST00000542335 TMOD3Q9NYL9 352 aa14.41□□□□□ -0.1
PDE1B-204ENST00000542335 NCLP19338 710 aaKnown RBP14.4□□□□□ -0.1
PDE1B-204ENST00000542335 MSNP26038 577 aaKnown RBP14.4□□□□□ -0.1
PDE1B-204ENST00000542335 CAVIN1Q6NZI2 390 aaKnown RBP14.4□□□□□ -0.1
PDE1B-204ENST00000542335 EVI5LQ96CN4 794 aa14.4□□□□□ -0.1
PDE1B-204ENST00000542335 BICC1Q9H694 974 aaKnown RBP14.4□□□□□ -0.1
PDE1B-204ENST00000542335 DIAPH3Q9NSV4 1193 aa14.4□□□□□ -0.1
PDE1B-204ENST00000542335 COL15A1P39059 1388 aa14.4□□□□□ -0.1
PDE1B-204ENST00000542335 MBD3O95983 291 aa14.4□□□□□ -0.1
PDE1B-204ENST00000542335 IGKV5-2P06315 115 aa14.4□□□□□ -0.1
PDE1B-204ENST00000542335 CWC27Q6UX04 472 aaKnown RBP14.4□□□□□ -0.1
PDE1B-204ENST00000542335 KCNB2Q92953 911 aa14.4□□□□□ -0.1
PDE1B-204ENST00000542335 PA2G4Q9UQ80 394 aaKnown RBP14.4□□□□□ -0.1
PDE1B-204ENST00000542335 ZNF330Q9Y3S2 320 aaPredicted RBP14.4□□□□□ -0.1
PDE1B-204ENST00000542335 UBR2Q8IWV8 1755 aa14.4□□□□□ -0.1
PDE1B-204ENST00000542335 TCHHQ07283 1943 aa14.39□□□□□ -0.11
PDE1B-204ENST00000542335 HIP1O00291 1037 aa14.39□□□□□ -0.11
PDE1B-204ENST00000542335 EXOC5O00471 708 aa14.39□□□□□ -0.11
PDE1B-204ENST00000542335 NEXNQ0ZGT2 675 aa14.39□□□□□ -0.11
PDE1B-204ENST00000542335 NKX1-1Q15270 411 aaPredicted RBP14.39□□□□□ -0.11
PDE1B-204ENST00000542335 NEURL1BA8MQ27 555 aa14.39□□□□□ -0.11
PDE1B-204ENST00000542335 SASH1O94885 1247 aa14.39□□□□□ -0.11
PDE1B-204ENST00000542335 G3BP1Q13283 466 aaKnown RBP eCLIP14.39□□□□□ -0.11
PDE1B-204ENST00000542335 AACSQ86V21 672 aa14.39□□□□□ -0.11
PDE1B-204ENST00000542335 METTL22Q9BUU2 404 aaPredicted RBP14.39□□□□□ -0.11
PDE1B-204ENST00000542335 SNRKQ9NRH2 765 aa14.39□□□□□ -0.11
PDE1B-204ENST00000542335 COL14A1Q05707 1796 aaKnown RBP14.38□□□□□ -0.11
PDE1B-204ENST00000542335 WDR33Q9C0J8 1336 aaKnown RBP14.38□□□□□ -0.11
PDE1B-204ENST00000542335 LRP10Q7Z4F1 713 aa14.38□□□□□ -0.11
PDE1B-204ENST00000542335 RASEFQ8IZ41 740 aa14.38□□□□□ -0.11
PDE1B-204ENST00000542335 COL16A1Q07092 1604 aaPredicted RBP14.38□□□□□ -0.11
PDE1B-204ENST00000542335 A1BGP04217 495 aa14.38□□□□□ -0.11
PDE1B-204ENST00000542335 NOL8Q76FK4 1167 aaKnown RBP14.38□□□□□ -0.11
PDE1B-204ENST00000542335 JARID2Q92833 1246 aaPredicted RBP14.38□□□□□ -0.11
PDE1B-204ENST00000542335 MYD88Q99836 296 aa14.38□□□□□ -0.11
PDE1B-204ENST00000542335 TM6SF1Q9BZW5 370 aa14.38□□□□□ -0.11
PDE1B-204ENST00000542335 ASAP1Q9ULH1 1129 aa14.38□□□□□ -0.11
PDE1B-204ENST00000542335 NUP188Q5SRE5 1749 aa14.38□□□□□ -0.11
PDE1B-204ENST00000542335 RPAP1Q9BWH6 1393 aaPredicted RBP14.37□□□□□ -0.11
PDE1B-204ENST00000542335 PAPPAQ13219 1627 aa14.37□□□□□ -0.11
PDE1B-204ENST00000542335 GCKRQ14397 625 aa14.37□□□□□ -0.11
PDE1B-204ENST00000542335 ANKRD13DQ6ZTN6 518 aa14.37□□□□□ -0.11
PDE1B-204ENST00000542335 CHAMP1Q96JM3 812 aa14.37□□□□□ -0.11
PDE1B-204ENST00000542335 PIGBQ92521 554 aa14.37□□□□□ -0.11
PDE1B-204ENST00000542335 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.37□□□□□ -0.11
PDE1B-204ENST00000542335 AK2P54819 239 aa14.36□□□□□ -0.11
PDE1B-204ENST00000542335 ANP32BQ92688 251 aaKnown RBP14.36□□□□□ -0.11
PDE1B-204ENST00000542335 EAF2Q96CJ1 260 aaPredicted RBP14.36□□□□□ -0.11
PDE1B-204ENST00000542335 RBSNQ9H1K0 784 aa14.36□□□□□ -0.11
PDE1B-204ENST00000542335 TMEM51Q9NW97 253 aa14.36□□□□□ -0.11
PDE1B-204ENST00000542335 LIMCH1Q9UPQ0 1083 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms