RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 PSDA5PKW4 1024 aaPredicted RBP11.78□□□□□ -0.52
PAAF1-209ENST00000540659 RAB11FIP3O75154 756 aa11.78□□□□□ -0.52
PAAF1-209ENST00000540659 TXNRD1Q16881 649 aa11.78□□□□□ -0.52
PAAF1-209ENST00000540659 EPHA10Q5JZY3 1008 aa11.78□□□□□ -0.52
PAAF1-209ENST00000540659 TSHZ3Q63HK5 1081 aa11.78□□□□□ -0.52
PAAF1-209ENST00000540659 NUTM1Q86Y26 1132 aa11.78□□□□□ -0.52
PAAF1-209ENST00000540659 RHPN1Q8TCX5 695 aa11.78□□□□□ -0.52
PAAF1-209ENST00000540659 ANO8Q9HCE9 1232 aaPredicted RBP11.78□□□□□ -0.52
PAAF1-209ENST00000540659 CASZ1Q86V15 1759 aa11.77□□□□□ -0.52
PAAF1-209ENST00000540659 LOC102724428A0A0B4J2F2 783 aa11.77□□□□□ -0.53
PAAF1-209ENST00000540659 MSH5O43196 834 aa11.77□□□□□ -0.53
PAAF1-209ENST00000540659 SIK1P57059 783 aa11.77□□□□□ -0.53
PAAF1-209ENST00000540659 MTX1Q13505 466 aa11.77□□□□□ -0.53
PAAF1-209ENST00000540659 SIL1Q9H173 461 aa11.77□□□□□ -0.53
PAAF1-209ENST00000540659 UPF2Q9HAU5 1272 aaKnown RBP11.77□□□□□ -0.53
PAAF1-209ENST00000540659 CHMP3Q9Y3E7 222 aa11.77□□□□□ -0.53
PAAF1-209ENST00000540659 AK9Q5TCS8 1911 aa11.77□□□□□ -0.53
PAAF1-209ENST00000540659 MAP3K15Q6ZN16 1313 aa11.77□□□□□ -0.53
PAAF1-209ENST00000540659 MX1P20591 662 aa11.76□□□□□ -0.53
PAAF1-209ENST00000540659 TCIRG1Q13488 830 aa11.76□□□□□ -0.53
PAAF1-209ENST00000540659 ITPK1Q13572 414 aa11.76□□□□□ -0.53
PAAF1-209ENST00000540659 R3HDM1Q15032 1099 aaKnown RBP11.76□□□□□ -0.53
PAAF1-209ENST00000540659 HLFQ16534 295 aa11.76□□□□□ -0.53
PAAF1-209ENST00000540659 HSP90AB4PQ58FF6 505 aa11.76□□□□□ -0.53
PAAF1-209ENST00000540659 KLHDC4Q8TBB5 520 aa11.76□□□□□ -0.53
PAAF1-209ENST00000540659 KIF1BPQ96EK5 621 aa11.76□□□□□ -0.53
PAAF1-209ENST00000540659 IPO9Q96P70 1041 aaKnown RBP11.76□□□□□ -0.53
PAAF1-209ENST00000540659 TBC1D2BQ9UPU7 963 aa11.76□□□□□ -0.53
PAAF1-209ENST00000540659 QSER1Q2KHR3 1735 aa11.76□□□□□ -0.53
PAAF1-209ENST00000540659 LRP5O75197 1615 aa11.75□□□□□ -0.53
PAAF1-209ENST00000540659 ZNF831Q5JPB2 1677 aa11.75□□□□□ -0.53
PAAF1-209ENST00000540659 H7C1W4 665 aa11.75□□□□□ -0.53
PAAF1-209ENST00000540659 CDC45O75419 566 aa11.75□□□□□ -0.53
PAAF1-209ENST00000540659 GPTP24298 496 aa11.75□□□□□ -0.53
PAAF1-209ENST00000540659 CRKLP46109 303 aaKnown RBP11.75□□□□□ -0.53
PAAF1-209ENST00000540659 PDE1AP54750 535 aa11.75□□□□□ -0.53
PAAF1-209ENST00000540659 CASP7P55210 303 aa11.75□□□□□ -0.53
PAAF1-209ENST00000540659 G3BP1Q13283 466 aaKnown RBP eCLIP11.75□□□□□ -0.53
PAAF1-209ENST00000540659 DZIP3Q86Y13 1208 aaKnown RBP11.75□□□□□ -0.53
PAAF1-209ENST00000540659 CCDC191Q8NCU4 936 aa11.75□□□□□ -0.53
PAAF1-209ENST00000540659 ISCA1Q9BUE6 129 aa11.75□□□□□ -0.53
PAAF1-209ENST00000540659 LRRC4BQ9NT99 713 aa11.75□□□□□ -0.53
PAAF1-209ENST00000540659 CCDC87Q9NVE4 849 aa11.75□□□□□ -0.53
PAAF1-209ENST00000540659 BCORQ6W2J9 1755 aa11.74□□□□□ -0.53
PAAF1-209ENST00000540659 SDSP20132 328 aa11.74□□□□□ -0.53
PAAF1-209ENST00000540659 IL6STP40189 918 aaPredicted RBP11.74□□□□□ -0.53
PAAF1-209ENST00000540659 KCNQ4P56696 695 aa11.74□□□□□ -0.53
PAAF1-209ENST00000540659 INTS5Q6P9B9 1019 aaKnown RBP11.74□□□□□ -0.53
PAAF1-209ENST00000540659 GIGYF2Q6Y7W6 1299 aaKnown RBP11.74□□□□□ -0.53
PAAF1-209ENST00000540659 TBC1D9Q6ZT07 1266 aa11.74□□□□□ -0.53
PAAF1-209ENST00000540659 ERICH6Q7L0X2 663 aa11.74□□□□□ -0.53
PAAF1-209ENST00000540659 DDRGK1Q96HY6 314 aa11.74□□□□□ -0.53
PAAF1-209ENST00000540659 NOP58Q9Y2X3 529 aaKnown RBP11.74□□□□□ -0.53
PAAF1-209ENST00000540659 SALL3Q9BXA9 1300 aa11.74□□□□□ -0.53
PAAF1-209ENST00000540659 MYH14Q7Z406 1995 aaKnown RBP11.74□□□□□ -0.53
PAAF1-209ENST00000540659 TRIM6-TRIM34B2RNG4 842 aa11.73□□□□□ -0.53
PAAF1-209ENST00000540659 MAP4K4O95819 1239 aaPredicted RBP11.73□□□□□ -0.53
PAAF1-209ENST00000540659 C4BP0C0L5 1744 aa11.73□□□□□ -0.53
PAAF1-209ENST00000540659 FOXO4P98177 505 aa11.73□□□□□ -0.53
PAAF1-209ENST00000540659 SLC27A3Q5K4L6 730 aa11.73□□□□□ -0.53
PAAF1-209ENST00000540659 LMBR1LQ6UX01 489 aa11.73□□□□□ -0.53
PAAF1-209ENST00000540659 ERC1Q8IUD2 1116 aa11.73□□□□□ -0.53
PAAF1-209ENST00000540659 RILPL2Q969X0 211 aa11.73□□□□□ -0.53
PAAF1-209ENST00000540659 OSBPL3Q9H4L5 887 aa11.73□□□□□ -0.53
PAAF1-209ENST00000540659 MYH3P11055 1940 aa11.72□□□□□ -0.53
PAAF1-209ENST00000540659 COL15A1P39059 1388 aa11.72□□□□□ -0.53
PAAF1-209ENST00000540659 ZNF827Q17R98 1081 aa11.72□□□□□ -0.53
PAAF1-209ENST00000540659 RABL6Q3YEC7 729 aaPredicted RBP11.72□□□□□ -0.53
PAAF1-209ENST00000540659 HSP90AB3PQ58FF7 597 aa11.72□□□□□ -0.53
PAAF1-209ENST00000540659 CLASRPQ8N2M8 674 aaKnown RBP11.72□□□□□ -0.53
PAAF1-209ENST00000540659 LINC00116Q8NCU8 138 aa11.72□□□□□ -0.53
PAAF1-209ENST00000540659 FAM89AQ96GI7 184 aa11.72□□□□□ -0.53
PAAF1-209ENST00000540659 C22orf23Q9BZE7 217 aa11.72□□□□□ -0.53
PAAF1-209ENST00000540659 CCNL1Q9UK58 526 aaPredicted RBP11.72□□□□□ -0.53
PAAF1-209ENST00000540659 FAM177BA6PVY3 158 aa11.71□□□□□ -0.53
PAAF1-209ENST00000540659 SASH1O94885 1247 aa11.71□□□□□ -0.53
PAAF1-209ENST00000540659 IFIT2P09913 472 aaKnown RBP11.71□□□□□ -0.53
PAAF1-209ENST00000540659 RFX5P48382 616 aaPredicted RBP11.71□□□□□ -0.53
PAAF1-209ENST00000540659 EIF5P55010 431 aaKnown RBP11.71□□□□□ -0.53
PAAF1-209ENST00000540659 TBC1D32Q96NH3 1257 aa11.71□□□□□ -0.53
PAAF1-209ENST00000540659 CCDC85AQ96PX6 553 aaPredicted RBP11.71□□□□□ -0.53
PAAF1-209ENST00000540659 STK32BQ9NY57 414 aa11.71□□□□□ -0.53
PAAF1-209ENST00000540659 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.71□□□□□ -0.53
PAAF1-209ENST00000540659 UBR3Q6ZT12 1888 aa11.71□□□□□ -0.53
PAAF1-209ENST00000540659 PCCAP05165 728 aaPredicted RBP11.7□□□□□ -0.54
PAAF1-209ENST00000540659 HSP90B1P14625 803 aaKnown RBP11.7□□□□□ -0.54
PAAF1-209ENST00000540659 PTPN12Q05209 780 aaKnown RBP11.7□□□□□ -0.54
PAAF1-209ENST00000540659 SLC15A2Q16348 729 aa11.7□□□□□ -0.54
PAAF1-209ENST00000540659 CASC1Q6TDU7 716 aa11.7□□□□□ -0.54
PAAF1-209ENST00000540659 AACSQ86V21 672 aa11.7□□□□□ -0.54
PAAF1-209ENST00000540659 NLRP10Q86W26 655 aa11.7□□□□□ -0.54
PAAF1-209ENST00000540659 CCDC8Q9H0W5 538 aaPredicted RBP11.7□□□□□ -0.54
PAAF1-209ENST00000540659 STAP2Q9UGK3 403 aa11.7□□□□□ -0.54
PAAF1-209ENST00000540659 SCN7AQ01118 1682 aa11.69□□□□□ -0.54
PAAF1-209ENST00000540659 AOX1Q06278 1338 aa11.69□□□□□ -0.54
PAAF1-209ENST00000540659 ERVV-1B6SEH8 477 aa11.69□□□□□ -0.54
PAAF1-209ENST00000540659 SLC4A3P48751 1232 aa11.69□□□□□ -0.54
PAAF1-209ENST00000540659 SYNE4Q8N205 404 aa11.69□□□□□ -0.54
PAAF1-209ENST00000540659 ZBTB38Q8NAP3 1195 aaPredicted RBP11.69□□□□□ -0.54
PAAF1-209ENST00000540659 AKT1S1Q96B36 256 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms