RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 TPCN1Q9ULQ1 816 aa13.32□□□□□ -0.28
CPT1A-206ENST00000540367 SPDYE4A6NLX3 237 aa13.32□□□□□ -0.28
CPT1A-206ENST00000540367 PDCP20941 246 aa13.32□□□□□ -0.28
CPT1A-206ENST00000540367 CAMK4Q16566 473 aa13.32□□□□□ -0.28
CPT1A-206ENST00000540367 BEND3Q5T5X7 828 aa13.32□□□□□ -0.28
CPT1A-206ENST00000540367 RBM43Q6ZSC3 357 aaKnown RBP13.32□□□□□ -0.28
CPT1A-206ENST00000540367 CCDC186Q7Z3E2 898 aa13.32□□□□□ -0.28
CPT1A-206ENST00000540367 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.32□□□□□ -0.28
CPT1A-206ENST00000540367 FEZ1Q99689 392 aa13.32□□□□□ -0.28
CPT1A-206ENST00000540367 TNMDQ9H2S6 317 aa13.32□□□□□ -0.28
CPT1A-206ENST00000540367 CBX8Q9HC52 389 aa13.32□□□□□ -0.28
CPT1A-206ENST00000540367 DDX19AQ9NUU7 478 aaKnown RBP13.32□□□□□ -0.28
CPT1A-206ENST00000540367 SMTNL1A8MU46 457 aa13.31□□□□□ -0.28
CPT1A-206ENST00000540367 NCBP1Q09161 790 aaKnown RBP13.31□□□□□ -0.28
CPT1A-206ENST00000540367 OS9Q13438 667 aaPredicted RBP13.31□□□□□ -0.28
CPT1A-206ENST00000540367 ANO6Q4KMQ2 910 aa13.31□□□□□ -0.28
CPT1A-206ENST00000540367 PLA2G4DQ86XP0 818 aa13.31□□□□□ -0.28
CPT1A-206ENST00000540367 CLASRPQ8N2M8 674 aaKnown RBP13.31□□□□□ -0.28
CPT1A-206ENST00000540367 ECHDC1Q9NTX5 307 aa13.31□□□□□ -0.28
CPT1A-206ENST00000540367 ARHGAP23Q9P227 1491 aa13.31□□□□□ -0.28
CPT1A-206ENST00000540367 MTX1Q13505 466 aa13.31□□□□□ -0.28
CPT1A-206ENST00000540367 CREB3L3Q68CJ9 461 aa13.31□□□□□ -0.28
CPT1A-206ENST00000540367 FERMT3Q86UX7 667 aa13.31□□□□□ -0.28
CPT1A-206ENST00000540367 TDRD7Q8NHU6 1098 aaKnown RBP13.31□□□□□ -0.28
CPT1A-206ENST00000540367 DNAAF4Q8WXU2 420 aa13.31□□□□□ -0.28
CPT1A-206ENST00000540367 GPATCH3Q96I76 525 aa13.31□□□□□ -0.28
CPT1A-206ENST00000540367 SCAND2PQ9GZW5 306 aaPredicted RBP13.31□□□□□ -0.28
CPT1A-206ENST00000540367 DACT1Q9NYF0 836 aa13.31□□□□□ -0.28
CPT1A-206ENST00000540367 CHMP3Q9Y3E7 222 aa13.31□□□□□ -0.28
CPT1A-206ENST00000540367 RBM8AQ9Y5S9 174 aaKnown RBP13.31□□□□□ -0.28
CPT1A-206ENST00000540367 NPHP3Q7Z494 1330 aa13.3□□□□□ -0.28
CPT1A-206ENST00000540367 SETD1BQ9UPS6 1966 aaKnown RBP13.3□□□□□ -0.28
CPT1A-206ENST00000540367 ZNF75DP51815 510 aa13.3□□□□□ -0.28
CPT1A-206ENST00000540367 EVI5LQ96CN4 794 aa13.3□□□□□ -0.28
CPT1A-206ENST00000540367 SLIT1O75093 1534 aa13.3□□□□□ -0.28
CPT1A-206ENST00000540367 MED1Q15648 1581 aaPredicted RBP13.3□□□□□ -0.28
CPT1A-206ENST00000540367 KCNQ3O43525 872 aa13.3□□□□□ -0.28
CPT1A-206ENST00000540367 LRMPQ12912 555 aa13.3□□□□□ -0.28
CPT1A-206ENST00000540367 ZSCAN25Q6NSZ9 544 aa13.3□□□□□ -0.28
CPT1A-206ENST00000540367 CKAP2LQ8IYA6 745 aa13.3□□□□□ -0.28
CPT1A-206ENST00000540367 CLSTN2Q9H4D0 955 aa13.3□□□□□ -0.28
CPT1A-206ENST00000540367 KDM3BQ7LBC6 1761 aa13.29□□□□□ -0.28
CPT1A-206ENST00000540367 PSMA5P28066 241 aa13.29□□□□□ -0.28
CPT1A-206ENST00000540367 FAM173BQ6P4H8 233 aa13.29□□□□□ -0.28
CPT1A-206ENST00000540367 DRC7Q8IY82 874 aa13.29□□□□□ -0.28
CPT1A-206ENST00000540367 DDX54Q8TDD1 881 aaKnown RBP13.29□□□□□ -0.28
CPT1A-206ENST00000540367 MAP4K1Q92918 833 aa13.29□□□□□ -0.28
CPT1A-206ENST00000540367 SPATA32Q96LK8 384 aa13.29□□□□□ -0.28
CPT1A-206ENST00000540367 C16orf45Q96MC5 204 aaPredicted RBP13.29□□□□□ -0.28
CPT1A-206ENST00000540367 PI4KAP2A4QPH2 592 aa13.29□□□□□ -0.28
CPT1A-206ENST00000540367 GOLGA6L4A6NEF3 574 aa13.29□□□□□ -0.28
CPT1A-206ENST00000540367 HOXB7P09629 217 aa13.29□□□□□ -0.28
CPT1A-206ENST00000540367 PI4KAP1Q8N8J0 262 aa13.29□□□□□ -0.28
CPT1A-206ENST00000540367 TRIM5Q9C035 493 aa13.29□□□□□ -0.28
CPT1A-206ENST00000540367 OGFRQ9NZT2 677 aa13.29□□□□□ -0.28
CPT1A-206ENST00000540367 DIP2AQ14689 1571 aa13.28□□□□□ -0.28
CPT1A-206ENST00000540367 HOXC9P31274 260 aa13.28□□□□□ -0.28
CPT1A-206ENST00000540367 KCNJ4P48050 445 aa13.28□□□□□ -0.28
CPT1A-206ENST00000540367 ANKRD1Q15327 319 aa13.28□□□□□ -0.28
CPT1A-206ENST00000540367 NRBP1Q9UHY1 535 aa13.28□□□□□ -0.28
CPT1A-206ENST00000540367 CEMIPQ8WUJ3 1361 aa13.28□□□□□ -0.28
CPT1A-206ENST00000540367 MARF1Q9Y4F3 1742 aaKnown RBP13.28□□□□□ -0.28
CPT1A-206ENST00000540367 HIP1O00291 1037 aa13.28□□□□□ -0.28
CPT1A-206ENST00000540367 SLC27A2O14975 620 aa13.28□□□□□ -0.28
CPT1A-206ENST00000540367 IFIT2P09913 472 aaKnown RBP13.28□□□□□ -0.28
CPT1A-206ENST00000540367 TNNT1P13805 278 aa13.28□□□□□ -0.28
CPT1A-206ENST00000540367 ERC1Q8IUD2 1116 aa13.28□□□□□ -0.28
CPT1A-206ENST00000540367 ABTB2Q8N961 1025 aa13.28□□□□□ -0.28
CPT1A-206ENST00000540367 LEO1Q8WVC0 666 aaPredicted RBP13.28□□□□□ -0.28
CPT1A-206ENST00000540367 ALDH8A1Q9H2A2 487 aaPredicted RBP13.28□□□□□ -0.28
CPT1A-206ENST00000540367 LGR6Q9HBX8 967 aa13.28□□□□□ -0.28
CPT1A-206ENST00000540367 SNRKQ9NRH2 765 aa13.28□□□□□ -0.28
CPT1A-206ENST00000540367 CHPF2Q9P2E5 772 aa13.28□□□□□ -0.28
CPT1A-206ENST00000540367 PAXBP1Q9Y5B6 917 aa13.28□□□□□ -0.28
CPT1A-206ENST00000540367 ADCY9O60503 1353 aa13.27□□□□□ -0.28
CPT1A-206ENST00000540367 EIF4A1P60842 406 aaKnown RBP13.27□□□□□ -0.29
CPT1A-206ENST00000540367 CHMP4AQ9BY43 222 aa13.27□□□□□ -0.29
CPT1A-206ENST00000540367 USP54Q70EL1 1684 aa13.27□□□□□ -0.29
CPT1A-206ENST00000540367 NPHP4O75161 1426 aaPredicted RBP13.27□□□□□ -0.29
CPT1A-206ENST00000540367 CDC25BP30305 580 aa13.27□□□□□ -0.29
CPT1A-206ENST00000540367 NMIQ13287 307 aaPredicted RBP13.27□□□□□ -0.29
CPT1A-206ENST00000540367 BLOC1S2Q6QNY1 142 aa13.27□□□□□ -0.29
CPT1A-206ENST00000540367 CGNQ9P2M7 1197 aaKnown RBP13.27□□□□□ -0.29
CPT1A-206ENST00000540367 CTNNA3Q9UI47 895 aa13.27□□□□□ -0.29
CPT1A-206ENST00000540367 CAVIN2O95810 425 aa13.26□□□□□ -0.29
CPT1A-206ENST00000540367 ZNF165P49910 485 aa13.26□□□□□ -0.29
CPT1A-206ENST00000540367 LARP1Q6PKG0 1096 aaKnown RBP13.26□□□□□ -0.29
CPT1A-206ENST00000540367 FAM227BQ96M60 508 aa13.26□□□□□ -0.29
CPT1A-206ENST00000540367 CLIP2Q9UDT6 1046 aa13.26□□□□□ -0.29
CPT1A-206ENST00000540367 RPS6KB1P23443 525 aa13.25□□□□□ -0.29
CPT1A-206ENST00000540367 COL9A3Q14050 684 aaPredicted RBP13.25□□□□□ -0.29
CPT1A-206ENST00000540367 RNF20Q5VTR2 975 aa13.25□□□□□ -0.29
CPT1A-206ENST00000540367 CCDC112Q8NEF3 446 aa13.25□□□□□ -0.29
CPT1A-206ENST00000540367 CACTINQ8WUQ7 758 aaKnown RBP13.25□□□□□ -0.29
CPT1A-206ENST00000540367 LRRC59Q96AG4 307 aaKnown RBP13.25□□□□□ -0.29
CPT1A-206ENST00000540367 TFIP11Q9UBB9 837 aaKnown RBP13.25□□□□□ -0.29
CPT1A-206ENST00000540367 NR1I2O75469 434 aa13.25□□□□□ -0.29
CPT1A-206ENST00000540367 PDE4CQ08493 712 aa13.25□□□□□ -0.29
CPT1A-206ENST00000540367 TOB2Q14106 344 aaPredicted RBP13.25□□□□□ -0.29
CPT1A-206ENST00000540367 AACSQ86V21 672 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms