RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 LOC102724428A0A0B4J2F2 783 aa27.51■■■□□ 2
HOMER3-204ENST00000539827 SIK1P57059 783 aa27.51■■■□□ 2
HOMER3-204ENST00000539827 BECN1Q14457 450 aa27.51■■■□□ 2
HOMER3-204ENST00000539827 COPRSQ9NQ92 184 aa27.51■■■□□ 2
HOMER3-204ENST00000539827 MAP4K4O95819 1239 aaPredicted RBP27.51■■□□□ 1.99
HOMER3-204ENST00000539827 PTPN12Q05209 780 aaKnown RBP27.51■■□□□ 1.99
HOMER3-204ENST00000539827 GIGYF2Q6Y7W6 1299 aaKnown RBP27.51■■□□□ 1.99
HOMER3-204ENST00000539827 AACSQ86V21 672 aa27.51■■□□□ 1.99
HOMER3-204ENST00000539827 PALLDQ8WX93 1383 aa27.51■■□□□ 1.99
HOMER3-204ENST00000539827 IFIT2P09913 472 aaKnown RBP27.5■■□□□ 1.99
HOMER3-204ENST00000539827 IL6STP40189 918 aaPredicted RBP27.49■■□□□ 1.99
HOMER3-204ENST00000539827 ITPK1Q13572 414 aa27.49■■□□□ 1.99
HOMER3-204ENST00000539827 USP42Q9H9J4 1324 aaKnown RBP27.49■■□□□ 1.99
HOMER3-204ENST00000539827 EIF5BO60841 1220 aaKnown RBP27.49■■□□□ 1.99
HOMER3-204ENST00000539827 TRIM28Q13263 835 aaKnown RBP27.49■■□□□ 1.99
HOMER3-204ENST00000539827 TBC1D2BQ9UPU7 963 aa27.49■■□□□ 1.99
HOMER3-204ENST00000539827 INTS5Q6P9B9 1019 aaKnown RBP27.48■■□□□ 1.99
HOMER3-204ENST00000539827 GPTP24298 496 aa27.48■■□□□ 1.99
HOMER3-204ENST00000539827 DZIP3Q86Y13 1208 aaKnown RBP27.48■■□□□ 1.99
HOMER3-204ENST00000539827 SMARCC1Q92922 1105 aaPredicted RBP27.48■■□□□ 1.99
HOMER3-204ENST00000539827 EAF2Q96CJ1 260 aaPredicted RBP27.48■■□□□ 1.99
HOMER3-204ENST00000539827 CCDC8Q9H0W5 538 aaPredicted RBP27.48■■□□□ 1.99
HOMER3-204ENST00000539827 CCDC87Q9NVE4 849 aa27.48■■□□□ 1.99
HOMER3-204ENST00000539827 TTC41PQ6P2S7 1318 aa27.47■■□□□ 1.99
HOMER3-204ENST00000539827 CRKLP46109 303 aaKnown RBP27.47■■□□□ 1.99
HOMER3-204ENST00000539827 FBXO41Q8TF61 875 aa27.46■■□□□ 1.99
HOMER3-204ENST00000539827 TBC1D2Q9BYX2 928 aa27.46■■□□□ 1.99
HOMER3-204ENST00000539827 AFF2P51816 1311 aa27.46■■□□□ 1.99
HOMER3-204ENST00000539827 USP26Q9BXU7 913 aa27.46■■□□□ 1.99
HOMER3-204ENST00000539827 ERC2O15083 957 aa27.45■■□□□ 1.98
HOMER3-204ENST00000539827 CHMLP26374 656 aa27.45■■□□□ 1.98
HOMER3-204ENST00000539827 FAM89AQ96GI7 184 aa27.45■■□□□ 1.98
HOMER3-204ENST00000539827 ECHDC1Q9NTX5 307 aa27.45■■□□□ 1.98
HOMER3-204ENST00000539827 PCCAP05165 728 aaPredicted RBP27.44■■□□□ 1.98
HOMER3-204ENST00000539827 HSP90AB3PQ58FF7 597 aa27.44■■□□□ 1.98
HOMER3-204ENST00000539827 EIF5P55010 431 aaKnown RBP27.44■■□□□ 1.98
HOMER3-204ENST00000539827 GPATCH3Q96I76 525 aa27.44■■□□□ 1.98
HOMER3-204ENST00000539827 KIF2CQ99661 725 aa27.44■■□□□ 1.98
HOMER3-204ENST00000539827 TLR7Q9NYK1 1049 aaKnown RBP27.44■■□□□ 1.98
HOMER3-204ENST00000539827 GLRX3O76003 335 aaKnown RBP27.43■■□□□ 1.98
HOMER3-204ENST00000539827 TFCP2Q12800 502 aa27.43■■□□□ 1.98
HOMER3-204ENST00000539827 PTF1AQ7RTS3 328 aa27.43■■□□□ 1.98
HOMER3-204ENST00000539827 NLRP10Q86W26 655 aa27.43■■□□□ 1.98
HOMER3-204ENST00000539827 THSD7AQ9UPZ6 1657 aa27.43■■□□□ 1.98
HOMER3-204ENST00000539827 FAM182BQ5T319 152 aa27.42■■□□□ 1.98
HOMER3-204ENST00000539827 GJD4Q96KN9 370 aaPredicted RBP27.42■■□□□ 1.98
HOMER3-204ENST00000539827 ESYT1Q9BSJ8 1104 aa27.42■■□□□ 1.98
HOMER3-204ENST00000539827 ERVV-1B6SEH8 477 aa27.42■■□□□ 1.98
HOMER3-204ENST00000539827 ZBTB38Q8NAP3 1195 aaPredicted RBP27.42■■□□□ 1.98
HOMER3-204ENST00000539827 SYNE4Q8N205 404 aa27.41■■□□□ 1.98
HOMER3-204ENST00000539827 NUP98P52948 1817 aa27.41■■□□□ 1.98
HOMER3-204ENST00000539827 REC8O95072 547 aa27.4■■□□□ 1.98
HOMER3-204ENST00000539827 CNTROBQ8N137 903 aa27.4■■□□□ 1.98
HOMER3-204ENST00000539827 ZNF594Q96JF6 807 aaPredicted RBP27.4■■□□□ 1.98
HOMER3-204ENST00000539827 AK9Q5TCS8 1911 aa27.4■■□□□ 1.98
HOMER3-204ENST00000539827 ANKRD36CQ5JPF3 1778 aa27.4■■□□□ 1.98
HOMER3-204ENST00000539827 MYH14Q7Z406 1995 aaKnown RBP27.39■■□□□ 1.97
HOMER3-204ENST00000539827 KCNQ4P56696 695 aa27.38■■□□□ 1.97
HOMER3-204ENST00000539827 TNNI3KQ59H18 835 aa27.38■■□□□ 1.97
HOMER3-204ENST00000539827 CCDC85AQ96PX6 553 aaPredicted RBP27.38■■□□□ 1.97
HOMER3-204ENST00000539827 FPGT-TNNI3KV9GXZ4 949 aa27.38■■□□□ 1.97
HOMER3-204ENST00000539827 CICQ96RK0 1608 aaPredicted RBP27.38■■□□□ 1.97
HOMER3-204ENST00000539827 RREB1Q92766 1687 aa27.38■■□□□ 1.97
HOMER3-204ENST00000539827 PLA2G12BQ9BX93 195 aa27.37■■□□□ 1.97
HOMER3-204ENST00000539827 ATG9AQ7Z3C6 839 aa27.37■■□□□ 1.97
HOMER3-204ENST00000539827 ILDR1Q86SU0 546 aaPredicted RBP27.36■■□□□ 1.97
HOMER3-204ENST00000539827 ZNF34Q8IZ26 560 aa27.36■■□□□ 1.97
HOMER3-204ENST00000539827 LINC00116Q8NCU8 138 aa27.36■■□□□ 1.97
HOMER3-204ENST00000539827 TRMT112Q9UI30 125 aaKnown RBP27.36■■□□□ 1.97
HOMER3-204ENST00000539827 LRRC24Q50LG9 513 aa27.35■■□□□ 1.97
HOMER3-204ENST00000539827 UBN2Q6ZU65 1347 aa27.35■■□□□ 1.97
HOMER3-204ENST00000539827 CDHR2Q9BYE9 1310 aa27.35■■□□□ 1.97
HOMER3-204ENST00000539827 HSCBQ8IWL3 235 aa27.35■■□□□ 1.97
HOMER3-204ENST00000539827 TRPC5Q9UL62 973 aaPredicted RBP27.35■■□□□ 1.97
HOMER3-204ENST00000539827 ATRNO75882 1429 aa27.34■■□□□ 1.97
HOMER3-204ENST00000539827 CCDC57Q2TAC2 916 aa27.34■■□□□ 1.97
HOMER3-204ENST00000539827 EYA2O00167 538 aa27.33■■□□□ 1.97
HOMER3-204ENST00000539827 CAMTA2O94983 1202 aa27.33■■□□□ 1.97
HOMER3-204ENST00000539827 PUS3Q9BZE2 481 aaKnown RBP27.33■■□□□ 1.97
HOMER3-204ENST00000539827 IL25Q9H293 177 aa27.33■■□□□ 1.97
HOMER3-204ENST00000539827 BOLA2Q9H3K6 86 aa27.33■■□□□ 1.97
HOMER3-204ENST00000539827 DBNLQ9UJU6 430 aaKnown RBP27.33■■□□□ 1.97
HOMER3-204ENST00000539827 COL5A3P25940 1745 aaPredicted RBP27.33■■□□□ 1.97
HOMER3-204ENST00000539827 CSF1RP07333 972 aa27.33■■□□□ 1.97
HOMER3-204ENST00000539827 IRS4O14654 1257 aaPredicted RBP27.32■■□□□ 1.96
HOMER3-204ENST00000539827 IL15P40933 162 aaPredicted RBP27.32■■□□□ 1.96
HOMER3-204ENST00000539827 SPRYD3Q8NCJ5 442 aa27.32■■□□□ 1.96
HOMER3-204ENST00000539827 SNX21Q969T3 373 aa27.32■■□□□ 1.96
HOMER3-204ENST00000539827 DBNDD2Q9BQY9 259 aa27.31■■□□□ 1.96
HOMER3-204ENST00000539827 ANO2Q9NQ90 1003 aa27.31■■□□□ 1.96
HOMER3-204ENST00000539827 BTAF1O14981 1849 aa27.31■■□□□ 1.96
HOMER3-204ENST00000539827 SEPT12Q8IYM1 358 aa27.31■■□□□ 1.96
HOMER3-204ENST00000539827 FAM177BA6PVY3 158 aa27.3■■□□□ 1.96
HOMER3-204ENST00000539827 NBR1Q14596 966 aa27.3■■□□□ 1.96
HOMER3-204ENST00000539827 EVI5LQ96CN4 794 aa27.3■■□□□ 1.96
HOMER3-204ENST00000539827 SLKQ9H2G2 1235 aaPredicted RBP27.3■■□□□ 1.96
HOMER3-204ENST00000539827 NHSQ6T4R5 1651 aa27.3■■□□□ 1.96
HOMER3-204ENST00000539827 SUSD4Q5VX71 490 aa27.29■■□□□ 1.96
HOMER3-204ENST00000539827 ZNF831Q5JPB2 1677 aa27.29■■□□□ 1.96
HOMER3-204ENST00000539827 CIAO1O76071 339 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms