RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 K7ELQ4 463 aaPredicted RBP12.38□□□□□ -0.43
SPARC-209ENST00000539687 PTCD1O75127 700 aaKnown RBP12.38□□□□□ -0.43
SPARC-209ENST00000539687 CHMLP26374 656 aa12.38□□□□□ -0.43
SPARC-209ENST00000539687 NBPF14Q5TI25 921 aa12.38□□□□□ -0.43
SPARC-209ENST00000539687 NBPF10Q6P3W6 841 aaKnown RBP12.38□□□□□ -0.43
SPARC-209ENST00000539687 NUTM2AQ8IVF1 878 aaPredicted RBP12.38□□□□□ -0.43
SPARC-209ENST00000539687 NBPF15Q8N660 670 aa12.38□□□□□ -0.43
SPARC-209ENST00000539687 PI4K2BQ8TCG2 481 aa12.38□□□□□ -0.43
SPARC-209ENST00000539687 BCL11AQ9H165 835 aa12.38□□□□□ -0.43
SPARC-209ENST00000539687 DDB1Q16531 1140 aa12.37□□□□□ -0.43
SPARC-209ENST00000539687 UBE3BQ7Z3V4 1068 aa12.37□□□□□ -0.43
SPARC-209ENST00000539687 AACSQ86V21 672 aa12.37□□□□□ -0.43
SPARC-209ENST00000539687 NUTM1Q86Y26 1132 aa12.37□□□□□ -0.43
SPARC-209ENST00000539687 PIGBQ92521 554 aa12.37□□□□□ -0.43
SPARC-209ENST00000539687 EVI5LQ96CN4 794 aa12.37□□□□□ -0.43
SPARC-209ENST00000539687 KAZALD1Q96I82 304 aa12.37□□□□□ -0.43
SPARC-209ENST00000539687 SLIT2O94813 1529 aa12.37□□□□□ -0.43
SPARC-209ENST00000539687 AFF2P51816 1311 aa12.37□□□□□ -0.43
SPARC-209ENST00000539687 RAD50Q92878 1312 aa12.37□□□□□ -0.43
SPARC-209ENST00000539687 RFX7Q2KHR2 1363 aa12.36□□□□□ -0.43
SPARC-209ENST00000539687 HSP90AA1P07900 732 aaKnown RBP12.36□□□□□ -0.43
SPARC-209ENST00000539687 PTMSP20962 102 aa12.36□□□□□ -0.43
SPARC-209ENST00000539687 TCIRG1Q13488 830 aa12.36□□□□□ -0.43
SPARC-209ENST00000539687 KIAA1211Q6ZU35 1233 aa12.36□□□□□ -0.43
SPARC-209ENST00000539687 IL17RAQ96F46 866 aa12.36□□□□□ -0.43
SPARC-209ENST00000539687 KIF2CQ99661 725 aa12.36□□□□□ -0.43
SPARC-209ENST00000539687 ANTXR1Q9H6X2 564 aa12.36□□□□□ -0.43
SPARC-209ENST00000539687 SPATA31A5Q5VU36 1347 aa12.36□□□□□ -0.43
SPARC-209ENST00000539687 SPATA31A7Q8IWB4 1347 aa12.36□□□□□ -0.43
SPARC-209ENST00000539687 ITGB4P16144 1822 aa12.35□□□□□ -0.43
SPARC-209ENST00000539687 A1BGP04217 495 aa12.35□□□□□ -0.43
SPARC-209ENST00000539687 CASP7P55210 303 aa12.35□□□□□ -0.43
SPARC-209ENST00000539687 NFKBIBQ15653 356 aa12.35□□□□□ -0.43
SPARC-209ENST00000539687 SMARCC1Q92922 1105 aaPredicted RBP12.35□□□□□ -0.43
SPARC-209ENST00000539687 ISCA1Q9BUE6 129 aa12.35□□□□□ -0.43
SPARC-209ENST00000539687 GPR108Q9NPR9 543 aa12.35□□□□□ -0.43
SPARC-209ENST00000539687 DIAPH3Q9NSV4 1193 aa12.35□□□□□ -0.43
SPARC-209ENST00000539687 CICQ96RK0 1608 aaPredicted RBP12.35□□□□□ -0.43
SPARC-209ENST00000539687 ERVV-1B6SEH8 477 aa12.34□□□□□ -0.43
SPARC-209ENST00000539687 ATP5J2-PTCD1G3V325 749 aa12.34□□□□□ -0.43
SPARC-209ENST00000539687 CIAO1O76071 339 aa12.34□□□□□ -0.43
SPARC-209ENST00000539687 ADAMTS2O95450 1211 aa12.34□□□□□ -0.43
SPARC-209ENST00000539687 HSP90B1P14625 803 aaKnown RBP12.34□□□□□ -0.43
SPARC-209ENST00000539687 IL6STP40189 918 aaPredicted RBP12.34□□□□□ -0.43
SPARC-209ENST00000539687 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
SPARC-209ENST00000539687 PLA2G12BQ9BX93 195 aa12.34□□□□□ -0.43
SPARC-209ENST00000539687 SLKQ9H2G2 1235 aaPredicted RBP12.34□□□□□ -0.43
SPARC-209ENST00000539687 ANO2Q9NQ90 1003 aa12.34□□□□□ -0.43
SPARC-209ENST00000539687 MAP3K15Q6ZN16 1313 aa12.34□□□□□ -0.43
SPARC-209ENST00000539687 SRCAPQ6ZRS2 3230 aa12.33□□□□□ -0.43
SPARC-209ENST00000539687 SASH1O94885 1247 aa12.33□□□□□ -0.44
SPARC-209ENST00000539687 PCCAP05165 728 aaPredicted RBP12.33□□□□□ -0.44
SPARC-209ENST00000539687 IL15P40933 162 aaPredicted RBP12.33□□□□□ -0.44
SPARC-209ENST00000539687 RFX5P48382 616 aaPredicted RBP12.33□□□□□ -0.44
SPARC-209ENST00000539687 TTLL7Q6ZT98 887 aa12.33□□□□□ -0.44
SPARC-209ENST00000539687 DNAJC10Q8IXB1 793 aa12.33□□□□□ -0.44
SPARC-209ENST00000539687 CWC22Q9HCG8 908 aaKnown RBP12.33□□□□□ -0.44
SPARC-209ENST00000539687 ASAP1Q9ULH1 1129 aa12.33□□□□□ -0.44
SPARC-209ENST00000539687 PA2G4Q9UQ80 394 aaKnown RBP12.33□□□□□ -0.44
SPARC-209ENST00000539687 CDHR2Q9BYE9 1310 aa12.33□□□□□ -0.44
SPARC-209ENST00000539687 DOT1LQ8TEK3 1739 aa12.32□□□□□ -0.44
SPARC-209ENST00000539687 SGSM2O43147 1006 aa12.32□□□□□ -0.44
SPARC-209ENST00000539687 CYP19A1P11511 503 aaPredicted RBP12.32□□□□□ -0.44
SPARC-209ENST00000539687 PTPN12Q05209 780 aaKnown RBP12.32□□□□□ -0.44
SPARC-209ENST00000539687 TSHZ3Q63HK5 1081 aa12.32□□□□□ -0.44
SPARC-209ENST00000539687 GIGYF2Q6Y7W6 1299 aaKnown RBP12.32□□□□□ -0.44
SPARC-209ENST00000539687 UNC5CLQ8IV45 518 aa12.32□□□□□ -0.44
SPARC-209ENST00000539687 ZBTB38Q8NAP3 1195 aaPredicted RBP12.32□□□□□ -0.44
SPARC-209ENST00000539687 AK7Q96M32 723 aa12.32□□□□□ -0.44
SPARC-209ENST00000539687 ZBTB3Q9H5J0 574 aa12.32□□□□□ -0.44
SPARC-209ENST00000539687 AK9Q5TCS8 1911 aa12.32□□□□□ -0.44
SPARC-209ENST00000539687 TJP1Q07157 1748 aa12.31□□□□□ -0.44
SPARC-209ENST00000539687 RGL2O15211 777 aa12.31□□□□□ -0.44
SPARC-209ENST00000539687 ATP5JP18859 108 aa12.31□□□□□ -0.44
SPARC-209ENST00000539687 PIP4K2AP48426 406 aaPredicted RBP12.31□□□□□ -0.44
SPARC-209ENST00000539687 RBM6P78332 1123 aaKnown RBP12.31□□□□□ -0.44
SPARC-209ENST00000539687 FOXO4P98177 505 aa12.31□□□□□ -0.44
SPARC-209ENST00000539687 TNNI3KQ59H18 835 aa12.31□□□□□ -0.44
SPARC-209ENST00000539687 EPHA10Q5JZY3 1008 aa12.31□□□□□ -0.44
SPARC-209ENST00000539687 LMBR1LQ6UX01 489 aa12.31□□□□□ -0.44
SPARC-209ENST00000539687 SYTL4Q96C24 671 aaPredicted RBP12.31□□□□□ -0.44
SPARC-209ENST00000539687 FPGT-TNNI3KV9GXZ4 949 aa12.31□□□□□ -0.44
SPARC-209ENST00000539687 ZNF831Q5JPB2 1677 aa12.3□□□□□ -0.44
SPARC-209ENST00000539687 DDX11L8A8MPP1 907 aa12.3□□□□□ -0.44
SPARC-209ENST00000539687 HSPA4P34932 840 aa12.3□□□□□ -0.44
SPARC-209ENST00000539687 VPS72Q15906 364 aa12.3□□□□□ -0.44
SPARC-209ENST00000539687 CCDC57Q2TAC2 916 aa12.3□□□□□ -0.44
SPARC-209ENST00000539687 LRRFIP1Q32MZ4 808 aaKnown RBP12.3□□□□□ -0.44
SPARC-209ENST00000539687 EAF2Q96CJ1 260 aaPredicted RBP12.3□□□□□ -0.44
SPARC-209ENST00000539687 GBP4Q96PP9 640 aa12.3□□□□□ -0.44
SPARC-209ENST00000539687 SIL1Q9H173 461 aa12.3□□□□□ -0.44
SPARC-209ENST00000539687 QTRT2Q9H974 415 aaKnown RBP12.3□□□□□ -0.44
SPARC-209ENST00000539687 AKAP2Q9Y2D5 859 aa12.3□□□□□ -0.44
SPARC-209ENST00000539687 CHMP3Q9Y3E7 222 aa12.3□□□□□ -0.44
SPARC-209ENST00000539687 CCDC9Q9Y3X0 531 aaKnown RBP12.3□□□□□ -0.44
SPARC-209ENST00000539687 EYA2O00167 538 aa12.29□□□□□ -0.44
SPARC-209ENST00000539687 PRIM1P49642 420 aaKnown RBP12.29□□□□□ -0.44
SPARC-209ENST00000539687 NUCB2P80303 420 aa12.29□□□□□ -0.44
SPARC-209ENST00000539687 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.29□□□□□ -0.44
SPARC-209ENST00000539687 C8orf37Q96NL8 207 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms