RNA–Protein interactions for RNA: ENST00000539534.5

LMO3-221, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-221ENST00000539534 GCKRQ14397 625 aa15.64■□□□□ 0.09
LMO3-221ENST00000539534 CWF19L2Q2TBE0 894 aaKnown RBP15.64■□□□□ 0.09
LMO3-221ENST00000539534 CRBNQ96SW2 442 aa15.64■□□□□ 0.09
LMO3-221ENST00000539534 SETDB2Q96T68 719 aa15.64■□□□□ 0.09
LMO3-221ENST00000539534 NIP7Q9Y221 180 aaKnown RBP eCLIP15.64■□□□□ 0.09
LMO3-221ENST00000539534 UTYO14607 1347 aa15.64■□□□□ 0.09
LMO3-221ENST00000539534 PSDA5PKW4 1024 aaPredicted RBP15.63■□□□□ 0.09
LMO3-221ENST00000539534 ZBTB7BO15156 539 aaPredicted RBP15.63■□□□□ 0.09
LMO3-221ENST00000539534 SUSD4Q5VX71 490 aa15.63■□□□□ 0.09
LMO3-221ENST00000539534 MTFR1LQ9H019 292 aa15.63■□□□□ 0.09
LMO3-221ENST00000539534 ZBTB40Q9NUA8 1239 aa15.63■□□□□ 0.09
LMO3-221ENST00000539534 CWC25Q9NXE8 425 aaPredicted RBP15.63■□□□□ 0.09
LMO3-221ENST00000539534 TUBGCP6Q96RT7 1819 aa15.63■□□□□ 0.09
LMO3-221ENST00000539534 H7C1W4 665 aa15.62■□□□□ 0.09
LMO3-221ENST00000539534 POLRMTO00411 1230 aaKnown RBP15.62■□□□□ 0.09
LMO3-221ENST00000539534 GPTP24298 496 aa15.62■□□□□ 0.09
LMO3-221ENST00000539534 DDR1Q08345 913 aa15.62■□□□□ 0.09
LMO3-221ENST00000539534 USP44Q9H0E7 712 aa15.62■□□□□ 0.09
LMO3-221ENST00000539534 NTSR2O95665 410 aa15.61■□□□□ 0.09
LMO3-221ENST00000539534 CASP7P55210 303 aa15.61■□□□□ 0.09
LMO3-221ENST00000539534 ZBTB38Q8NAP3 1195 aaPredicted RBP15.61■□□□□ 0.09
LMO3-221ENST00000539534 UTP14AQ9BVJ6 771 aaKnown RBP15.61■□□□□ 0.09
LMO3-221ENST00000539534 PPP4R2Q9NY27 417 aa15.61■□□□□ 0.09
LMO3-221ENST00000539534 CARMIL3Q8ND23 1372 aa15.61■□□□□ 0.09
LMO3-221ENST00000539534 SRCAPQ6ZRS2 3230 aa15.6■□□□□ 0.09
LMO3-221ENST00000539534 GRM8O00222 908 aa15.6■□□□□ 0.09
LMO3-221ENST00000539534 PCCAP05165 728 aaPredicted RBP15.6■□□□□ 0.09
LMO3-221ENST00000539534 MMP10P09238 476 aa15.6■□□□□ 0.09
LMO3-221ENST00000539534 SLC10A5Q5PT55 438 aa15.6■□□□□ 0.09
LMO3-221ENST00000539534 MSL1Q68DK7 614 aa15.6■□□□□ 0.09
LMO3-221ENST00000539534 TPTE2Q6XPS3 522 aa15.6■□□□□ 0.09
LMO3-221ENST00000539534 BICDL1Q6ZP65 573 aa15.6■□□□□ 0.09
LMO3-221ENST00000539534 PPP1R42Q7Z4L9 355 aa15.6■□□□□ 0.09
LMO3-221ENST00000539534 EXOC6Q8TAG9 804 aa15.6■□□□□ 0.09
LMO3-221ENST00000539534 SGIP1Q9BQI5 828 aa15.6■□□□□ 0.09
LMO3-221ENST00000539534 C9orf78Q9NZ63 289 aaPredicted RBP15.6■□□□□ 0.09
LMO3-221ENST00000539534 COL24A1Q17RW2 1714 aa15.6■□□□□ 0.09
LMO3-221ENST00000539534 ZBTB7AO95365 584 aa15.59■□□□□ 0.09
LMO3-221ENST00000539534 GNAI2P04899 355 aa15.59■□□□□ 0.09
LMO3-221ENST00000539534 SERPINB2P05120 415 aa15.59■□□□□ 0.09
LMO3-221ENST00000539534 UBTFL1P0CB47 393 aaPredicted RBP15.59■□□□□ 0.09
LMO3-221ENST00000539534 NYXQ9GZU5 481 aa15.59■□□□□ 0.09
LMO3-221ENST00000539534 CASZ1Q86V15 1759 aa15.59■□□□□ 0.09
LMO3-221ENST00000539534 NBPF5PQ86XG9 351 aaPredicted RBP15.58■□□□□ 0.08
LMO3-221ENST00000539534 RPAP2Q8IXW5 612 aaPredicted RBP15.58■□□□□ 0.08
LMO3-221ENST00000539534 TRMT112Q9UI30 125 aaKnown RBP15.58■□□□□ 0.08
LMO3-221ENST00000539534 NBPF7P0C2Y1 421 aaPredicted RBP15.57■□□□□ 0.08
LMO3-221ENST00000539534 PTGER2P43116 358 aa15.57■□□□□ 0.08
LMO3-221ENST00000539534 FAM89AQ96GI7 184 aa15.57■□□□□ 0.08
LMO3-221ENST00000539534 MEIS3Q99687 375 aa15.57■□□□□ 0.08
LMO3-221ENST00000539534 PLA2G12BQ9BX93 195 aa15.57■□□□□ 0.08
LMO3-221ENST00000539534 ATF5Q9Y2D1 282 aaPredicted RBP15.57■□□□□ 0.08
LMO3-221ENST00000539534 GTF3C3Q9Y5Q9 886 aa15.57■□□□□ 0.08
LMO3-221ENST00000539534 PARP3Q9Y6F1 533 aa15.57■□□□□ 0.08
LMO3-221ENST00000539534 SH3TC1Q8TE82 1336 aa15.57■□□□□ 0.08
LMO3-221ENST00000539534 CDHR2Q9BYE9 1310 aa15.57■□□□□ 0.08
LMO3-221ENST00000539534 HMMRO75330 724 aa15.56■□□□□ 0.08
LMO3-221ENST00000539534 IRX6P78412 446 aaPredicted RBP15.56■□□□□ 0.08
LMO3-221ENST00000539534 PRR5LQ6MZQ0 368 aa15.56■□□□□ 0.08
LMO3-221ENST00000539534 SYNE4Q8N205 404 aa15.56■□□□□ 0.08
LMO3-221ENST00000539534 KAZALD1Q96I82 304 aa15.56■□□□□ 0.08
LMO3-221ENST00000539534 LAMB2P55268 1798 aa15.56■□□□□ 0.08
LMO3-221ENST00000539534 RIC1Q4ADV7 1423 aa15.55■□□□□ 0.08
LMO3-221ENST00000539534 KLRG2A4D1S0 409 aaPredicted RBP15.55■□□□□ 0.08
LMO3-221ENST00000539534 MTX1Q13505 466 aa15.55■□□□□ 0.08
LMO3-221ENST00000539534 ERFEQ4G0M1 354 aa15.55■□□□□ 0.08
LMO3-221ENST00000539534 UBE3BQ7Z3V4 1068 aa15.55■□□□□ 0.08
LMO3-221ENST00000539534 CNBD1Q8NA66 436 aa15.55■□□□□ 0.08
LMO3-221ENST00000539534 FAM177BA6PVY3 158 aa15.54■□□□□ 0.08
LMO3-221ENST00000539534 IRS4O14654 1257 aaPredicted RBP15.54■□□□□ 0.08
LMO3-221ENST00000539534 POLD1P28340 1107 aa15.54■□□□□ 0.08
LMO3-221ENST00000539534 HDAC1Q13547 482 aaPredicted RBP15.54■□□□□ 0.08
LMO3-221ENST00000539534 NUTM1Q86Y26 1132 aa15.54■□□□□ 0.08
LMO3-221ENST00000539534 JARID2Q92833 1246 aaPredicted RBP15.54■□□□□ 0.08
LMO3-221ENST00000539534 SPON1Q9HCB6 807 aa15.54■□□□□ 0.08
LMO3-221ENST00000539534 MYH3P11055 1940 aa15.54■□□□□ 0.08
LMO3-221ENST00000539534 FOXO4P98177 505 aa15.53■□□□□ 0.08
LMO3-221ENST00000539534 PPP4R3CPQ6ZMV5 832 aa15.53■□□□□ 0.08
LMO3-221ENST00000539534 SUCLG2Q96I99 432 aa15.53■□□□□ 0.08
LMO3-221ENST00000539534 CCDC136Q96JN2 1154 aa15.53■□□□□ 0.08
LMO3-221ENST00000539534 BRIP1Q9BX63 1249 aa15.53■□□□□ 0.08
LMO3-221ENST00000539534 RWDD1Q9H446 243 aaPredicted RBP15.53■□□□□ 0.08
LMO3-221ENST00000539534 CSF1RP07333 972 aa15.52■□□□□ 0.08
LMO3-221ENST00000539534 HCLS1P14317 486 aaPredicted RBP15.52■□□□□ 0.08
LMO3-221ENST00000539534 GTF2E1P29083 439 aaPredicted RBP15.52■□□□□ 0.08
LMO3-221ENST00000539534 SF3B3Q15393 1217 aaKnown RBP15.52■□□□□ 0.08
LMO3-221ENST00000539534 RABL6Q3YEC7 729 aaPredicted RBP15.52■□□□□ 0.08
LMO3-221ENST00000539534 EPHA10Q5JZY3 1008 aa15.52■□□□□ 0.08
LMO3-221ENST00000539534 ANKRD44Q8N8A2 993 aa15.52■□□□□ 0.08
LMO3-221ENST00000539534 ABCC12Q96J65 1359 aa15.51■□□□□ 0.07
LMO3-221ENST00000539534 PDE8AO60658 829 aa15.51■□□□□ 0.07
LMO3-221ENST00000539534 ST5P78524 1137 aa15.51■□□□□ 0.07
LMO3-221ENST00000539534 RTL5Q5HYW3 569 aaPredicted RBP15.51■□□□□ 0.07
LMO3-221ENST00000539534 NRXN2Q9P2S2 1712 aa15.51■□□□□ 0.07
LMO3-221ENST00000539534 CRY2Q49AN0 593 aa15.5■□□□□ 0.07
LMO3-221ENST00000539534 CEP85Q6P2H3 762 aa15.5■□□□□ 0.07
LMO3-221ENST00000539534 C3orf67Q6ZVT6 689 aa15.5■□□□□ 0.07
LMO3-221ENST00000539534 CENPQQ7L2Z9 268 aaPredicted RBP15.5■□□□□ 0.07
LMO3-221ENST00000539534 CCDC24Q8N4L8 307 aa15.5■□□□□ 0.07
LMO3-221ENST00000539534 TTLL11Q8NHH1 800 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms