RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 NEXNQ0ZGT2 675 aa10.97□□□□□ -0.65
DDB1-213ENST00000539332 TXNRD1Q16881 649 aa10.97□□□□□ -0.65
DDB1-213ENST00000539332 KIF6Q6ZMV9 814 aa10.97□□□□□ -0.65
DDB1-213ENST00000539332 SSH3Q8TE77 659 aa10.97□□□□□ -0.65
DDB1-213ENST00000539332 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.97□□□□□ -0.65
DDB1-213ENST00000539332 MYH3P11055 1940 aa10.97□□□□□ -0.65
DDB1-213ENST00000539332 BCORQ6W2J9 1755 aa10.96□□□□□ -0.65
DDB1-213ENST00000539332 MAP3K15Q6ZN16 1313 aa10.96□□□□□ -0.65
DDB1-213ENST00000539332 NBPF7P0C2Y1 421 aaPredicted RBP10.96□□□□□ -0.65
DDB1-213ENST00000539332 CWF19L2Q2TBE0 894 aaKnown RBP10.96□□□□□ -0.65
DDB1-213ENST00000539332 DZIP3Q86Y13 1208 aaKnown RBP10.96□□□□□ -0.65
DDB1-213ENST00000539332 LNPKQ9C0E8 428 aa10.96□□□□□ -0.65
DDB1-213ENST00000539332 AK9Q5TCS8 1911 aa10.96□□□□□ -0.66
DDB1-213ENST00000539332 PNMA6EA0A0J9YXQ4 647 aa10.95□□□□□ -0.66
DDB1-213ENST00000539332 NEURL1BA8MQ27 555 aa10.95□□□□□ -0.66
DDB1-213ENST00000539332 GNPATO15228 680 aa10.95□□□□□ -0.66
DDB1-213ENST00000539332 RPS6KA4O75676 772 aa10.95□□□□□ -0.66
DDB1-213ENST00000539332 ANKRD45Q5TZF3 282 aa10.95□□□□□ -0.66
DDB1-213ENST00000539332 UBE2Q2Q8WVN8 375 aa10.95□□□□□ -0.66
DDB1-213ENST00000539332 MYD88Q99836 296 aa10.95□□□□□ -0.66
DDB1-213ENST00000539332 TBC1D2BQ9UPU7 963 aa10.95□□□□□ -0.66
DDB1-213ENST00000539332 C4AP0C0L4 1744 aa10.95□□□□□ -0.66
DDB1-213ENST00000539332 GRM8O00222 908 aa10.95□□□□□ -0.66
DDB1-213ENST00000539332 HDAC5Q9UQL6 1122 aa10.95□□□□□ -0.66
DDB1-213ENST00000539332 ERVV-1B6SEH8 477 aa10.94□□□□□ -0.66
DDB1-213ENST00000539332 ATP5J2-PTCD1G3V325 749 aa10.94□□□□□ -0.66
DDB1-213ENST00000539332 GIGYF2Q6Y7W6 1299 aaKnown RBP10.94□□□□□ -0.66
DDB1-213ENST00000539332 AMIGO3Q86WK7 504 aa10.94□□□□□ -0.66
DDB1-213ENST00000539332 BBXQ8WY36 941 aaPredicted RBP10.94□□□□□ -0.66
DDB1-213ENST00000539332 AK7Q96M32 723 aa10.94□□□□□ -0.66
DDB1-213ENST00000539332 RTCBQ9Y3I0 505 aaKnown RBP10.94□□□□□ -0.66
DDB1-213ENST00000539332 SCN7AQ01118 1682 aa10.94□□□□□ -0.66
DDB1-213ENST00000539332 A0A087WZG4 1122 aa10.93□□□□□ -0.66
DDB1-213ENST00000539332 CAMTA2O94983 1202 aa10.93□□□□□ -0.66
DDB1-213ENST00000539332 HMGB2P26583 209 aaKnown RBP10.93□□□□□ -0.66
DDB1-213ENST00000539332 TCIRG1Q13488 830 aa10.93□□□□□ -0.66
DDB1-213ENST00000539332 GCKRQ14397 625 aa10.93□□□□□ -0.66
DDB1-213ENST00000539332 HLFQ16534 295 aa10.93□□□□□ -0.66
DDB1-213ENST00000539332 BMP2KLQ5H9B9 411 aa10.93□□□□□ -0.66
DDB1-213ENST00000539332 KAZALD1Q96I82 304 aa10.93□□□□□ -0.66
DDB1-213ENST00000539332 LAMB2P55268 1798 aa10.93□□□□□ -0.66
DDB1-213ENST00000539332 SALL3Q9BXA9 1300 aa10.93□□□□□ -0.66
DDB1-213ENST00000539332 CASP7P55210 303 aa10.93□□□□□ -0.66
DDB1-213ENST00000539332 SMIM5Q71RC9 77 aa10.93□□□□□ -0.66
DDB1-213ENST00000539332 PPP1R42Q7Z4L9 355 aa10.93□□□□□ -0.66
DDB1-213ENST00000539332 ISCA1Q9BUE6 129 aa10.93□□□□□ -0.66
DDB1-213ENST00000539332 C9orf78Q9NZ63 289 aaPredicted RBP10.93□□□□□ -0.66
DDB1-213ENST00000539332 TRIM28Q13263 835 aaKnown RBP10.92□□□□□ -0.66
DDB1-213ENST00000539332 HSP90AB3PQ58FF7 597 aa10.92□□□□□ -0.66
DDB1-213ENST00000539332 PLEKHM2Q8IWE5 1019 aa10.92□□□□□ -0.66
DDB1-213ENST00000539332 CCDC191Q8NCU4 936 aa10.92□□□□□ -0.66
DDB1-213ENST00000539332 CAMKK2Q96RR4 588 aa10.92□□□□□ -0.66
DDB1-213ENST00000539332 EN1Q05925 392 aaPredicted RBP10.91□□□□□ -0.66
DDB1-213ENST00000539332 SF3B2Q13435 895 aaKnown RBP10.91□□□□□ -0.66
DDB1-213ENST00000539332 ARHGEF1Q92888 912 aaKnown RBP10.91□□□□□ -0.66
DDB1-213ENST00000539332 SUCLG2Q96I99 432 aa10.91□□□□□ -0.66
DDB1-213ENST00000539332 OSBPL3Q9H4L5 887 aa10.91□□□□□ -0.66
DDB1-213ENST00000539332 CWC25Q9NXE8 425 aaPredicted RBP10.91□□□□□ -0.66
DDB1-213ENST00000539332 CASZ1Q86V15 1759 aa10.91□□□□□ -0.66
DDB1-213ENST00000539332 RGL2O15211 777 aa10.9□□□□□ -0.66
DDB1-213ENST00000539332 IGSF3O75054 1194 aa10.9□□□□□ -0.66
DDB1-213ENST00000539332 RAB11FIP3O75154 756 aa10.9□□□□□ -0.66
DDB1-213ENST00000539332 PHF14O94880 888 aa10.9□□□□□ -0.66
DDB1-213ENST00000539332 CDK11BP21127 795 aaKnown RBP10.9□□□□□ -0.66
DDB1-213ENST00000539332 TRAPPC3LQ5T215 181 aa10.9□□□□□ -0.66
DDB1-213ENST00000539332 CNKSR2Q8WXI2 1034 aa10.9□□□□□ -0.66
DDB1-213ENST00000539332 NARFQ9UHQ1 456 aa10.9□□□□□ -0.66
DDB1-213ENST00000539332 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.9□□□□□ -0.67
DDB1-213ENST00000539332 SRGAP3O43295 1099 aa10.9□□□□□ -0.67
DDB1-213ENST00000539332 PDIA4P13667 645 aaKnown RBP10.9□□□□□ -0.67
DDB1-213ENST00000539332 GPTP24298 496 aa10.9□□□□□ -0.67
DDB1-213ENST00000539332 SSFA2P28290 1259 aa10.9□□□□□ -0.67
DDB1-213ENST00000539332 BAG6P46379 1132 aa10.9□□□□□ -0.67
DDB1-213ENST00000539332 EZH2Q15910 746 aaKnown RBP10.9□□□□□ -0.67
DDB1-213ENST00000539332 ZNF827Q17R98 1081 aa10.9□□□□□ -0.67
DDB1-213ENST00000539332 RABL6Q3YEC7 729 aaPredicted RBP10.9□□□□□ -0.67
DDB1-213ENST00000539332 CLEC4GQ6UXB4 293 aa10.9□□□□□ -0.67
DDB1-213ENST00000539332 UBE3BQ7Z3V4 1068 aa10.9□□□□□ -0.67
DDB1-213ENST00000539332 NLRP10Q86W26 655 aa10.9□□□□□ -0.67
DDB1-213ENST00000539332 ZNF34Q8IZ26 560 aa10.9□□□□□ -0.67
DDB1-213ENST00000539332 AKT1S1Q96B36 256 aa10.9□□□□□ -0.67
DDB1-213ENST00000539332 EXOC6BQ9Y2D4 811 aa10.9□□□□□ -0.67
DDB1-213ENST00000539332 ZNF652Q9Y2D9 606 aa10.9□□□□□ -0.67
DDB1-213ENST00000539332 H7C1W4 665 aa10.89□□□□□ -0.67
DDB1-213ENST00000539332 ZPR1O75312 459 aa10.89□□□□□ -0.67
DDB1-213ENST00000539332 RFC4P35249 363 aa10.89□□□□□ -0.67
DDB1-213ENST00000539332 NFKBIBQ15653 356 aa10.89□□□□□ -0.67
DDB1-213ENST00000539332 DEFB132Q7Z7B7 95 aa10.89□□□□□ -0.67
DDB1-213ENST00000539332 CCDC125Q86Z20 511 aa10.89□□□□□ -0.67
DDB1-213ENST00000539332 LRRCC1Q9C099 1032 aa10.89□□□□□ -0.67
DDB1-213ENST00000539332 BICC1Q9H694 974 aaKnown RBP10.89□□□□□ -0.67
DDB1-213ENST00000539332 BCL2L12Q9HB09 334 aa10.89□□□□□ -0.67
DDB1-213ENST00000539332 SRP68Q9UHB9 627 aaKnown RBP10.89□□□□□ -0.67
DDB1-213ENST00000539332 UBN2Q6ZU65 1347 aa10.89□□□□□ -0.67
DDB1-213ENST00000539332 USP42Q9H9J4 1324 aaKnown RBP10.89□□□□□ -0.67
DDB1-213ENST00000539332 SMARCA5O60264 1052 aaPredicted RBP10.88□□□□□ -0.67
DDB1-213ENST00000539332 HSP90AB4PQ58FF6 505 aa10.88□□□□□ -0.67
DDB1-213ENST00000539332 TTC22Q5TAA0 569 aa10.88□□□□□ -0.67
DDB1-213ENST00000539332 USPL1Q5W0Q7 1092 aa10.88□□□□□ -0.67
DDB1-213ENST00000539332 FAM43AQ8N2R8 423 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms