RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 PNMA6EA0A0J9YXQ4 647 aa15.37■□□□□ 0.05
DDB1-209ENST00000537877 SSFA2P28290 1259 aa15.37■□□□□ 0.05
DDB1-209ENST00000537877 PPP1R42Q7Z4L9 355 aa15.37■□□□□ 0.05
DDB1-209ENST00000537877 PROM2Q8N271 834 aa15.37■□□□□ 0.05
DDB1-209ENST00000537877 ZBTB38Q8NAP3 1195 aaPredicted RBP15.37■□□□□ 0.05
DDB1-209ENST00000537877 BICC1Q9H694 974 aaKnown RBP15.37■□□□□ 0.05
DDB1-209ENST00000537877 CDHR2Q9BYE9 1310 aa15.37■□□□□ 0.05
DDB1-209ENST00000537877 LAMB2P55268 1798 aa15.37■□□□□ 0.05
DDB1-209ENST00000537877 UBN2Q6ZU65 1347 aa15.37■□□□□ 0.05
DDB1-209ENST00000537877 GPTP24298 496 aa15.36■□□□□ 0.05
DDB1-209ENST00000537877 RABL6Q3YEC7 729 aaPredicted RBP15.36■□□□□ 0.05
DDB1-209ENST00000537877 KAZALD1Q96I82 304 aa15.36■□□□□ 0.05
DDB1-209ENST00000537877 PDZRN3Q9UPQ7 1066 aa15.36■□□□□ 0.05
DDB1-209ENST00000537877 USP42Q9H9J4 1324 aaKnown RBP15.36■□□□□ 0.05
DDB1-209ENST00000537877 SRGAP3O43295 1099 aa15.36■□□□□ 0.05
DDB1-209ENST00000537877 ZPR1O75312 459 aa15.36■□□□□ 0.05
DDB1-209ENST00000537877 NUCB1Q02818 461 aa15.36■□□□□ 0.05
DDB1-209ENST00000537877 TRAPPC3LQ5T215 181 aa15.36■□□□□ 0.05
DDB1-209ENST00000537877 ARHGEF1Q92888 912 aaKnown RBP15.36■□□□□ 0.05
DDB1-209ENST00000537877 TUBGCP6Q96RT7 1819 aa15.35■□□□□ 0.05
DDB1-209ENST00000537877 RFC4P35249 363 aa15.35■□□□□ 0.05
DDB1-209ENST00000537877 SF3B2Q13435 895 aaKnown RBP15.35■□□□□ 0.05
DDB1-209ENST00000537877 PLA2G12BQ9BX93 195 aa15.35■□□□□ 0.05
DDB1-209ENST00000537877 NIP7Q9Y221 180 aaKnown RBP eCLIP15.35■□□□□ 0.05
DDB1-209ENST00000537877 MYH3P11055 1940 aa15.34■□□□□ 0.05
DDB1-209ENST00000537877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.34■□□□□ 0.05
DDB1-209ENST00000537877 HSP90AB4PQ58FF6 505 aa15.34■□□□□ 0.05
DDB1-209ENST00000537877 USPL1Q5W0Q7 1092 aa15.34■□□□□ 0.05
DDB1-209ENST00000537877 AMIGO3Q86WK7 504 aa15.34■□□□□ 0.05
DDB1-209ENST00000537877 TRMT112Q9UI30 125 aaKnown RBP15.34■□□□□ 0.05
DDB1-209ENST00000537877 QSER1Q2KHR3 1735 aa15.33■□□□□ 0.04
DDB1-209ENST00000537877 PHF14O94880 888 aa15.33■□□□□ 0.04
DDB1-209ENST00000537877 HSP90B1P14625 803 aaKnown RBP15.33■□□□□ 0.04
DDB1-209ENST00000537877 BAG6P46379 1132 aa15.33■□□□□ 0.04
DDB1-209ENST00000537877 EPHA10Q5JZY3 1008 aa15.33■□□□□ 0.04
DDB1-209ENST00000537877 CHD1LQ86WJ1 897 aa15.33■□□□□ 0.04
DDB1-209ENST00000537877 JARID2Q92833 1246 aaPredicted RBP15.33■□□□□ 0.04
DDB1-209ENST00000537877 AKT1S1Q96B36 256 aa15.33■□□□□ 0.04
DDB1-209ENST00000537877 UTP14AQ9BVJ6 771 aaKnown RBP15.33■□□□□ 0.04
DDB1-209ENST00000537877 BCL2L12Q9HB09 334 aa15.33■□□□□ 0.04
DDB1-209ENST00000537877 ZBTB47Q9UFB7 747 aaPredicted RBP15.33■□□□□ 0.04
DDB1-209ENST00000537877 SRP68Q9UHB9 627 aaKnown RBP15.33■□□□□ 0.04
DDB1-209ENST00000537877 SH3TC1Q8TE82 1336 aa15.32■□□□□ 0.04
DDB1-209ENST00000537877 EP400Q96L91 3159 aa15.32■□□□□ 0.04
DDB1-209ENST00000537877 NTSR2O95665 410 aa15.32■□□□□ 0.04
DDB1-209ENST00000537877 FOXO4P98177 505 aa15.32■□□□□ 0.04
DDB1-209ENST00000537877 ANKRD45Q5TZF3 282 aa15.32■□□□□ 0.04
DDB1-209ENST00000537877 SUSD4Q5VX71 490 aa15.32■□□□□ 0.04
DDB1-209ENST00000537877 FLAD1Q8NFF5 587 aa15.32■□□□□ 0.04
DDB1-209ENST00000537877 FAM89AQ96GI7 184 aa15.32■□□□□ 0.04
DDB1-209ENST00000537877 CAMKK2Q96RR4 588 aa15.32■□□□□ 0.04
DDB1-209ENST00000537877 NOP58Q9Y2X3 529 aaKnown RBP15.32■□□□□ 0.04
DDB1-209ENST00000537877 DDX60Q8IY21 1712 aaKnown RBP15.32■□□□□ 0.04
DDB1-209ENST00000537877 RAB11FIP3O75154 756 aa15.31■□□□□ 0.04
DDB1-209ENST00000537877 ZNF827Q17R98 1081 aa15.31■□□□□ 0.04
DDB1-209ENST00000537877 RTL5Q5HYW3 569 aaPredicted RBP15.31■□□□□ 0.04
DDB1-209ENST00000537877 SMIM5Q71RC9 77 aa15.31■□□□□ 0.04
DDB1-209ENST00000537877 CCDC125Q86Z20 511 aa15.31■□□□□ 0.04
DDB1-209ENST00000537877 IRS4O14654 1257 aaPredicted RBP15.3■□□□□ 0.04
DDB1-209ENST00000537877 PDE8AO60658 829 aa15.3■□□□□ 0.04
DDB1-209ENST00000537877 SURF6O75683 361 aaKnown RBP15.3■□□□□ 0.04
DDB1-209ENST00000537877 TBC1D9BQ66K14 1250 aa15.3■□□□□ 0.04
DDB1-209ENST00000537877 LMBR1LQ6UX01 489 aa15.3■□□□□ 0.04
DDB1-209ENST00000537877 TFCP2L1Q9NZI6 479 aa15.3■□□□□ 0.04
DDB1-209ENST00000537877 EXOC6BQ9Y2D4 811 aa15.3■□□□□ 0.04
DDB1-209ENST00000537877 RGS3P49796 1198 aa15.29■□□□□ 0.04
DDB1-209ENST00000537877 EN1Q05925 392 aaPredicted RBP15.29■□□□□ 0.04
DDB1-209ENST00000537877 EZH2Q15910 746 aaKnown RBP15.29■□□□□ 0.04
DDB1-209ENST00000537877 ERC1Q8IUD2 1116 aa15.29■□□□□ 0.04
DDB1-209ENST00000537877 SETDB2Q96T68 719 aa15.29■□□□□ 0.04
DDB1-209ENST00000537877 LRRCC1Q9C099 1032 aa15.29■□□□□ 0.04
DDB1-209ENST00000537877 LNPKQ9C0E8 428 aa15.29■□□□□ 0.04
DDB1-209ENST00000537877 NYXQ9GZU5 481 aa15.29■□□□□ 0.04
DDB1-209ENST00000537877 CARMIL3Q8ND23 1372 aa15.29■□□□□ 0.04
DDB1-209ENST00000537877 CSF1RP07333 972 aa15.28■□□□□ 0.04
DDB1-209ENST00000537877 RFX5P48382 616 aaPredicted RBP15.28■□□□□ 0.04
DDB1-209ENST00000537877 CTSWP56202 376 aa15.28■□□□□ 0.04
DDB1-209ENST00000537877 SKAP1Q86WV1 359 aa15.28■□□□□ 0.04
DDB1-209ENST00000537877 KIF1BPQ96EK5 621 aa15.28■□□□□ 0.04
DDB1-209ENST00000537877 COPRSQ9NQ92 184 aa15.28■□□□□ 0.04
DDB1-209ENST00000537877 GYS1P13807 737 aa15.27■□□□□ 0.04
DDB1-209ENST00000537877 PDE4AP27815 886 aa15.27■□□□□ 0.04
DDB1-209ENST00000537877 CHMP3Q9Y3E7 222 aa15.27■□□□□ 0.04
DDB1-209ENST00000537877 RIC1Q4ADV7 1423 aa15.27■□□□□ 0.03
DDB1-209ENST00000537877 LRP5O75197 1615 aa15.26■□□□□ 0.03
DDB1-209ENST00000537877 PTPN12Q05209 780 aaKnown RBP15.26■□□□□ 0.03
DDB1-209ENST00000537877 OS9Q13438 667 aaPredicted RBP15.26■□□□□ 0.03
DDB1-209ENST00000537877 BICDL1Q6ZP65 573 aa15.26■□□□□ 0.03
DDB1-209ENST00000537877 SYNE4Q8N205 404 aa15.26■□□□□ 0.03
DDB1-209ENST00000537877 PA2G4Q9UQ80 394 aaKnown RBP15.26■□□□□ 0.03
DDB1-209ENST00000537877 RTL9Q8NET4 1388 aa15.26■□□□□ 0.03
DDB1-209ENST00000537877 CASZ1Q86V15 1759 aa15.26■□□□□ 0.03
DDB1-209ENST00000537877 FAM177BA6PVY3 158 aa15.25■□□□□ 0.03
DDB1-209ENST00000537877 APBB1O00213 710 aa15.25■□□□□ 0.03
DDB1-209ENST00000537877 G3BP1Q13283 466 aaKnown RBP eCLIP15.25■□□□□ 0.032e-9■■□□□ 11.8
DDB1-209ENST00000537877 NBPF5PQ86XG9 351 aaPredicted RBP15.25■□□□□ 0.03
DDB1-209ENST00000537877 TTLL11Q8NHH1 800 aa15.25■□□□□ 0.03
DDB1-209ENST00000537877 RHPN1Q8TCX5 695 aa15.25■□□□□ 0.03
DDB1-209ENST00000537877 STK32BQ9NY57 414 aa15.25■□□□□ 0.03
DDB1-209ENST00000537877 FBXO3Q9UK99 471 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms