RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 CNTROBQ8N137 903 aa27.71■■■□□ 2.03
HMGA2-206ENST00000536545 TRIM28Q13263 835 aaKnown RBP27.71■■■□□ 2.03
HMGA2-206ENST00000536545 MAP3K15Q6ZN16 1313 aa27.7■■■□□ 2.03
HMGA2-206ENST00000536545 CD2BP2O95400 341 aaKnown RBP27.7■■■□□ 2.02
HMGA2-206ENST00000536545 MAP4K4O95819 1239 aaPredicted RBP27.7■■■□□ 2.02
HMGA2-206ENST00000536545 LMBR1LQ6UX01 489 aa27.7■■■□□ 2.02
HMGA2-206ENST00000536545 KAT6BQ8WYB5 2073 aa27.7■■■□□ 2.02
HMGA2-206ENST00000536545 BCL9LQ86UU0 1499 aa27.69■■■□□ 2.02
HMGA2-206ENST00000536545 ANKRD36CQ5JPF3 1778 aa27.69■■■□□ 2.02
HMGA2-206ENST00000536545 NFKBIBQ15653 356 aa27.69■■■□□ 2.02
HMGA2-206ENST00000536545 RTL5Q5HYW3 569 aaPredicted RBP27.69■■■□□ 2.02
HMGA2-206ENST00000536545 ZNF330Q9Y3S2 320 aaPredicted RBP27.69■■■□□ 2.02
HMGA2-206ENST00000536545 CCDC9Q9Y3X0 531 aaKnown RBP27.68■■■□□ 2.02
HMGA2-206ENST00000536545 RREB1Q92766 1687 aa27.68■■■□□ 2.02
HMGA2-206ENST00000536545 TLR7Q9NYK1 1049 aaKnown RBP27.68■■■□□ 2.02
HMGA2-206ENST00000536545 ZBTB1Q9Y2K1 713 aa27.68■■■□□ 2.02
HMGA2-206ENST00000536545 IL25Q9H293 177 aa27.66■■■□□ 2.02
HMGA2-206ENST00000536545 EPB41L2O43491 1005 aaKnown RBP27.65■■■□□ 2.02
HMGA2-206ENST00000536545 CCDC8Q9H0W5 538 aaPredicted RBP27.65■■■□□ 2.02
HMGA2-206ENST00000536545 VPS72Q15906 364 aa27.65■■■□□ 2.02
HMGA2-206ENST00000536545 GIGYF2Q6Y7W6 1299 aaKnown RBP27.65■■■□□ 2.02
HMGA2-206ENST00000536545 K7ELQ4 463 aaPredicted RBP27.64■■■□□ 2.02
HMGA2-206ENST00000536545 SPRYD3Q8NCJ5 442 aa27.63■■■□□ 2.01
HMGA2-206ENST00000536545 ACSBG1Q96GR2 724 aa27.63■■■□□ 2.01
HMGA2-206ENST00000536545 ANO2Q9NQ90 1003 aa27.63■■■□□ 2.01
HMGA2-206ENST00000536545 SGSM2O43147 1006 aa27.63■■■□□ 2.01
HMGA2-206ENST00000536545 PCCAP05165 728 aaPredicted RBP27.63■■■□□ 2.01
HMGA2-206ENST00000536545 IL6STP40189 918 aaPredicted RBP27.63■■■□□ 2.01
HMGA2-206ENST00000536545 TFCP2Q12800 502 aa27.63■■■□□ 2.01
HMGA2-206ENST00000536545 TNNI3KQ59H18 835 aa27.63■■■□□ 2.01
HMGA2-206ENST00000536545 C8orf37Q96NL8 207 aa27.63■■■□□ 2.01
HMGA2-206ENST00000536545 FPGT-TNNI3KV9GXZ4 949 aa27.63■■■□□ 2.01
HMGA2-206ENST00000536545 DDIT3P35638 169 aa27.62■■■□□ 2.01
HMGA2-206ENST00000536545 IL17RAQ96F46 866 aa27.62■■■□□ 2.01
HMGA2-206ENST00000536545 EVI5LQ96CN4 794 aa27.61■■■□□ 2.01
HMGA2-206ENST00000536545 CHMP3Q9Y3E7 222 aa27.61■■■□□ 2.01
HMGA2-206ENST00000536545 HLFQ16534 295 aa27.6■■■□□ 2.01
HMGA2-206ENST00000536545 HSP90AB3PQ58FF7 597 aa27.6■■■□□ 2.01
HMGA2-206ENST00000536545 PLA2G12BQ9BX93 195 aa27.6■■■□□ 2.01
HMGA2-206ENST00000536545 MCCP23508 829 aa27.6■■■□□ 2.01
HMGA2-206ENST00000536545 FNBP4Q8N3X1 1017 aaPredicted RBP27.6■■■□□ 2.01
HMGA2-206ENST00000536545 NGLY1Q96IV0 654 aa27.6■■■□□ 2.01
HMGA2-206ENST00000536545 DBNLQ9UJU6 430 aaKnown RBP27.6■■■□□ 2.01
HMGA2-206ENST00000536545 NUP98P52948 1817 aa27.6■■■□□ 2.01
HMGA2-206ENST00000536545 ANAPC15P60006 121 aa27.59■■■□□ 2.01
HMGA2-206ENST00000536545 ATG9AQ7Z3C6 839 aa27.59■■■□□ 2.01
HMGA2-206ENST00000536545 ZBTB38Q8NAP3 1195 aaPredicted RBP27.59■■■□□ 2.01
HMGA2-206ENST00000536545 SPATA31A6Q5VVP1 1343 aa27.59■■■□□ 2.01
HMGA2-206ENST00000536545 FAM98CQ17RN3 349 aaKnown RBP27.58■■■□□ 2.01
HMGA2-206ENST00000536545 CHMP5Q9NZZ3 219 aa27.58■■■□□ 2.01
HMGA2-206ENST00000536545 PALLDQ8WX93 1383 aa27.58■■■□□ 2.01
HMGA2-206ENST00000536545 ZNF831Q5JPB2 1677 aa27.58■■■□□ 2.01
HMGA2-206ENST00000536545 RAD50Q92878 1312 aa27.58■■■□□ 2.01
HMGA2-206ENST00000536545 CDHR2Q9BYE9 1310 aa27.58■■■□□ 2.01
HMGA2-206ENST00000536545 ERVV-1B6SEH8 477 aa27.58■■■□□ 2
HMGA2-206ENST00000536545 MYT1Q01538 1121 aa27.58■■■□□ 2
HMGA2-206ENST00000536545 NLRP10Q86W26 655 aa27.58■■■□□ 2
HMGA2-206ENST00000536545 THSD7AQ9UPZ6 1657 aa27.57■■■□□ 2
HMGA2-206ENST00000536545 LOC102724428A0A0B4J2F2 783 aa27.57■■■□□ 2
HMGA2-206ENST00000536545 SIK1P57059 783 aa27.57■■■□□ 2
HMGA2-206ENST00000536545 INTS5Q6P9B9 1019 aaKnown RBP27.57■■■□□ 2
HMGA2-206ENST00000536545 DIAPH3Q9NSV4 1193 aa27.57■■■□□ 2
HMGA2-206ENST00000536545 PALD1Q9ULE6 856 aa27.57■■■□□ 2
HMGA2-206ENST00000536545 CCDC87Q9NVE4 849 aa27.56■■■□□ 2
HMGA2-206ENST00000536545 COL5A3P25940 1745 aaPredicted RBP27.56■■■□□ 2
HMGA2-206ENST00000536545 A0A0G2JS52 829 aa27.55■■■□□ 2
HMGA2-206ENST00000536545 FRAT2O75474 233 aaPredicted RBP27.55■■■□□ 2
HMGA2-206ENST00000536545 CIAO1O76071 339 aa27.55■■■□□ 2
HMGA2-206ENST00000536545 EIF5P55010 431 aaKnown RBP27.55■■■□□ 2
HMGA2-206ENST00000536545 DZIP3Q86Y13 1208 aaKnown RBP27.55■■■□□ 2
HMGA2-206ENST00000536545 LSG1Q9H089 658 aaKnown RBP27.55■■■□□ 2
HMGA2-206ENST00000536545 EYA2O00167 538 aa27.55■■■□□ 2
HMGA2-206ENST00000536545 ATP5JP18859 108 aa27.55■■■□□ 2
HMGA2-206ENST00000536545 IL15P40933 162 aaPredicted RBP27.55■■■□□ 2
HMGA2-206ENST00000536545 ITPK1Q13572 414 aa27.55■■■□□ 2
HMGA2-206ENST00000536545 FAM89AQ96GI7 184 aa27.55■■■□□ 2
HMGA2-206ENST00000536545 ARXQ96QS3 562 aa27.55■■■□□ 2
HMGA2-206ENST00000536545 GPR108Q9NPR9 543 aa27.55■■■□□ 2
HMGA2-206ENST00000536545 ZNF609O15014 1411 aa27.55■■■□□ 2
HMGA2-206ENST00000536545 ST18O60284 1047 aa27.54■■■□□ 2
HMGA2-206ENST00000536545 ATP6V1AP38606 617 aa27.54■■■□□ 2
HMGA2-206ENST00000536545 CRKLP46109 303 aaKnown RBP27.54■■■□□ 2
HMGA2-206ENST00000536545 CWC27Q6UX04 472 aaKnown RBP27.54■■■□□ 2
HMGA2-206ENST00000536545 GPTP24298 496 aa27.53■■■□□ 2
HMGA2-206ENST00000536545 HSPA4P34932 840 aa27.53■■■□□ 2
HMGA2-206ENST00000536545 RUFY2Q8WXA3 655 aa27.53■■■□□ 2
HMGA2-206ENST00000536545 SMARCC1Q92922 1105 aaPredicted RBP27.53■■■□□ 2
HMGA2-206ENST00000536545 BOLA2Q9H3K6 86 aa27.53■■■□□ 2
HMGA2-206ENST00000536545 CSF1RP07333 972 aa27.53■■■□□ 2
HMGA2-206ENST00000536545 DBNDD2Q9BQY9 259 aa27.53■■■□□ 2
HMGA2-206ENST00000536545 CIZ1Q9ULV3 898 aaPredicted RBP27.53■■■□□ 2
HMGA2-206ENST00000536545 MYH14Q7Z406 1995 aaKnown RBP27.52■■■□□ 2
HMGA2-206ENST00000536545 HIP1O00291 1037 aa27.52■■■□□ 2
HMGA2-206ENST00000536545 ZNF594Q96JF6 807 aaPredicted RBP27.52■■■□□ 2
HMGA2-206ENST00000536545 KCNQ2O43526 872 aa27.51■■□□□ 1.99
HMGA2-206ENST00000536545 LRRC24Q50LG9 513 aa27.51■■□□□ 1.99
HMGA2-206ENST00000536545 TBC1D2BQ9UPU7 963 aa27.51■■□□□ 1.99
HMGA2-206ENST00000536545 MYH3P11055 1940 aa27.51■■□□□ 1.99
HMGA2-206ENST00000536545 FBXO3Q9UK99 471 aa27.5■■□□□ 1.99
HMGA2-206ENST00000536545 UBN2Q6ZU65 1347 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms