RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 SYT9Q86SS6 491 aa8.68□□□□□ -1.02
ATM-223ENST00000533979 SLC30A3Q99726 388 aa8.68□□□□□ -1.02
ATM-223ENST00000533979 ALAS2P22557 587 aa8.67□□□□□ -1.02
ATM-223ENST00000533979 SNRPNP63162 240 aaKnown RBP8.67□□□□□ -1.02
ATM-223ENST00000533979 SPEM2Q0P670 501 aa8.67□□□□□ -1.02
ATM-223ENST00000533979 GRIN2CQ14957 1233 aa8.67□□□□□ -1.02
ATM-223ENST00000533979 OCLNQ16625 522 aa8.67□□□□□ -1.02
ATM-223ENST00000533979 LINC00114Q6XXX2 140 aa8.67□□□□□ -1.02
ATM-223ENST00000533979 FCHSD1Q86WN1 690 aa8.67□□□□□ -1.02
ATM-223ENST00000533979 STK32AQ8WU08 396 aa8.67□□□□□ -1.02
ATM-223ENST00000533979 COL26A1Q96A83 441 aa8.67□□□□□ -1.02
ATM-223ENST00000533979 MKL2Q9ULH7 1088 aa8.67□□□□□ -1.02
ATM-223ENST00000533979 ADARB2-AS1A8MUL3 147 aa8.66□□□□□ -1.02
ATM-223ENST00000533979 HOXB4P17483 251 aaPredicted RBP8.66□□□□□ -1.02
ATM-223ENST00000533979 AMPD1P23109 780 aa8.66□□□□□ -1.02
ATM-223ENST00000533979 TMEM164Q5U3C3 297 aa8.66□□□□□ -1.02
ATM-223ENST00000533979 QTRT2Q9H974 415 aaKnown RBP8.66□□□□□ -1.02
ATM-223ENST00000533979 RRAGCQ9HB90 399 aa8.66□□□□□ -1.02
ATM-223ENST00000533979 KLK14Q9P0G3 267 aa8.66□□□□□ -1.02
ATM-223ENST00000533979 ELOA3CA0A087WX78 387 aaPredicted RBP8.65□□□□□ -1.02
ATM-223ENST00000533979 ELOA3DA6NLF2 546 aaPredicted RBP8.65□□□□□ -1.02
ATM-223ENST00000533979 PIK3R2O00459 728 aa8.65□□□□□ -1.02
ATM-223ENST00000533979 PRMT3O60678 531 aa8.65□□□□□ -1.02
ATM-223ENST00000533979 FKBP5Q13451 457 aaPredicted RBP8.65□□□□□ -1.02
ATM-223ENST00000533979 ELOA3BQ3SY89 546 aa8.65□□□□□ -1.02
ATM-223ENST00000533979 CCDC82Q8N4S0 544 aa8.65□□□□□ -1.02
ATM-223ENST00000533979 ELOA3Q8NG57 546 aa8.65□□□□□ -1.02
ATM-223ENST00000533979 CLP1Q92989 425 aaKnown RBP8.65□□□□□ -1.02
ATM-223ENST00000533979 TNFRSF25Q93038 417 aa8.65□□□□□ -1.02
ATM-223ENST00000533979 MDFIQ99750 246 aa8.65□□□□□ -1.02
ATM-223ENST00000533979 MICAL2O94851 1124 aa8.64□□□□□ -1.03
ATM-223ENST00000533979 INPP5BP32019 993 aa8.64□□□□□ -1.03
ATM-223ENST00000533979 DGKZQ13574 1117 aa8.64□□□□□ -1.03
ATM-223ENST00000533979 COX20Q5RI15 118 aa8.64□□□□□ -1.03
ATM-223ENST00000533979 CHSY3Q70JA7 882 aa8.64□□□□□ -1.03
ATM-223ENST00000533979 IFT43Q96FT9 208 aa8.64□□□□□ -1.03
ATM-223ENST00000533979 GSX2Q9BZM3 304 aa8.64□□□□□ -1.03
ATM-223ENST00000533979 C1orf115Q9H7X2 142 aa8.64□□□□□ -1.03
ATM-223ENST00000533979 CXXC1Q9P0U4 656 aaPredicted RBP8.64□□□□□ -1.03
ATM-223ENST00000533979 LRFN2Q9ULH4 789 aa8.64□□□□□ -1.03
ATM-223ENST00000533979 OPLAHO14841 1288 aa8.62□□□□□ -1.03
ATM-223ENST00000533979 PTCD1O75127 700 aaKnown RBP8.62□□□□□ -1.03
ATM-223ENST00000533979 EPB42P16452 691 aa8.62□□□□□ -1.03
ATM-223ENST00000533979 CCINQ13939 588 aa8.62□□□□□ -1.03
ATM-223ENST00000533979 BRD2P25440 801 aaKnown RBP8.61□□□□□ -1.03
ATM-223ENST00000533979 IDH3AP50213 366 aa8.61□□□□□ -1.03
ATM-223ENST00000533979 ALYREFQ86V81 257 aaKnown RBP8.61□□□□□ -1.03
ATM-223ENST00000533979 DGKGP49619 791 aa8.6□□□□□ -1.03
ATM-223ENST00000533979 ARSDP51689 593 aa8.6□□□□□ -1.03
ATM-223ENST00000533979 C16orf46Q6P387 395 aa8.6□□□□□ -1.03
ATM-223ENST00000533979 KCTD17Q8N5Z5 321 aa8.6□□□□□ -1.03
ATM-223ENST00000533979 BHMTQ93088 406 aa8.6□□□□□ -1.03
ATM-223ENST00000533979 DCAF5Q96JK2 942 aa8.6□□□□□ -1.03
ATM-223ENST00000533979 GNB5O14775 395 aa8.59□□□□□ -1.03
ATM-223ENST00000533979 TREML1Q86YW5 311 aa8.58□□□□□ -1.04
ATM-223ENST00000533979 PNMA5Q96PV4 448 aa8.58□□□□□ -1.04
ATM-223ENST00000533979 SAP130Q9H0E3 1048 aa8.58□□□□□ -1.04
ATM-223ENST00000533979 SLAIN2Q9P270 581 aa8.58□□□□□ -1.04
ATM-223ENST00000533979 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.58□□□□□ -1.04
ATM-223ENST00000533979 MAP3K6O95382 1288 aa8.57□□□□□ -1.04
ATM-223ENST00000533979 EGFRP00533 1210 aa8.57□□□□□ -1.04
ATM-223ENST00000533979 GRNP28799 593 aaKnown RBP8.57□□□□□ -1.04
ATM-223ENST00000533979 PCSK7Q16549 785 aa8.57□□□□□ -1.04
ATM-223ENST00000533979 CAPN12Q6ZSI9 719 aa8.57□□□□□ -1.04
ATM-223ENST00000533979 RAB44Q7Z6P3 723 aaPredicted RBP8.57□□□□□ -1.04
ATM-223ENST00000533979 PRDM6Q9NQX0 595 aa8.57□□□□□ -1.04
ATM-223ENST00000533979 STARD13Q9Y3M8 1113 aa8.57□□□□□ -1.04
ATM-223ENST00000533979 IGHA1P01876 353 aa8.56□□□□□ -1.04
ATM-223ENST00000533979 ATP2B4P23634 1241 aa8.56□□□□□ -1.04
ATM-223ENST00000533979 ADH7P40394 386 aa8.56□□□□□ -1.04
ATM-223ENST00000533979 NAA30Q147X3 362 aaPredicted RBP8.56□□□□□ -1.04
ATM-223ENST00000533979 MICALL1Q8N3F8 863 aa8.56□□□□□ -1.04
ATM-223ENST00000533979 NOP53Q9NZM5 478 aaKnown RBP8.56□□□□□ -1.04
ATM-223ENST00000533979 RTCBQ9Y3I0 505 aaKnown RBP8.56□□□□□ -1.04
ATM-223ENST00000533979 TARSP26639 723 aaKnown RBP8.55□□□□□ -1.04
ATM-223ENST00000533979 COL8A1P27658 744 aa8.55□□□□□ -1.04
ATM-223ENST00000533979 C20orf204Q6ZNR8 217 aa8.55□□□□□ -1.04
ATM-223ENST00000533979 TMEM88BA6NKF7 163 aa8.54□□□□□ -1.04
ATM-223ENST00000533979 ETFBKMTQ8IXQ9 262 aa8.54□□□□□ -1.04
ATM-223ENST00000533979 CMTR1Q8N1G2 835 aaKnown RBP8.54□□□□□ -1.04
ATM-223ENST00000533979 SUV39H2Q9H5I1 410 aa8.54□□□□□ -1.04
ATM-223ENST00000533979 IGFLR1Q9H665 355 aa8.54□□□□□ -1.04
ATM-223ENST00000533979 FAM13BQ9NYF5 915 aa8.54□□□□□ -1.04
ATM-223ENST00000533979 STIM2Q9P246 746 aa8.54□□□□□ -1.04
ATM-223ENST00000533979 M0R082 166 aa8.53□□□□□ -1.04
ATM-223ENST00000533979 SASH3O75995 380 aa8.53□□□□□ -1.04
ATM-223ENST00000533979 NFKB1P19838 968 aa8.53□□□□□ -1.04
ATM-223ENST00000533979 SSFA2P28290 1259 aa8.53□□□□□ -1.04
ATM-223ENST00000533979 ZNF417Q8TAU3 575 aa8.53□□□□□ -1.04
ATM-223ENST00000533979 ZNF587Q96SQ5 575 aaPredicted RBP8.53□□□□□ -1.04
ATM-223ENST00000533979 MKNK1Q9BUB5 465 aa8.53□□□□□ -1.04
ATM-223ENST00000533979 PLVAPQ9BX97 442 aa8.53□□□□□ -1.04
ATM-223ENST00000533979 UBE2OQ9C0C9 1292 aaKnown RBP8.53□□□□□ -1.04
ATM-223ENST00000533979 ZFATQ9P243 1243 aa8.53□□□□□ -1.04
ATM-223ENST00000533979 TNFRSF10BO14763 440 aa8.52□□□□□ -1.05
ATM-223ENST00000533979 COL9A3Q14050 684 aaPredicted RBP8.52□□□□□ -1.05
ATM-223ENST00000533979 RGL4Q8IZJ4 473 aa8.52□□□□□ -1.05
ATM-223ENST00000533979 DNAJB12Q9NXW2 375 aaKnown RBP8.52□□□□□ -1.05
ATM-223ENST00000533979 KCNMB2Q9Y691 235 aa8.52□□□□□ -1.05
ATM-223ENST00000533979 KRBA1A5PL33 1030 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms