RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 KNSTRNQ9Y448 316 aa16.67■□□□□ 0.26
SVIP-205ENST00000533774 COL3A1P02461 1466 aaPredicted RBP16.67■□□□□ 0.26
SVIP-205ENST00000533774 CEMIPQ8WUJ3 1361 aa16.66■□□□□ 0.26
SVIP-205ENST00000533774 POLR2AP24928 1970 aaKnown RBP16.66■□□□□ 0.26
SVIP-205ENST00000533774 GNAT3A8MTJ3 354 aa16.66■□□□□ 0.26
SVIP-205ENST00000533774 DIAPH1O60610 1272 aaKnown RBP16.66■□□□□ 0.26
SVIP-205ENST00000533774 PSMD1Q99460 953 aa16.66■□□□□ 0.26
SVIP-205ENST00000533774 NIP7Q9Y221 180 aaKnown RBP eCLIP16.66■□□□□ 0.26
SVIP-205ENST00000533774 NBPF26B4DH59 902 aa16.65■□□□□ 0.26
SVIP-205ENST00000533774 HLFQ16534 295 aa16.65■□□□□ 0.26
SVIP-205ENST00000533774 NBPF10Q6P3W6 841 aaKnown RBP16.65■□□□□ 0.26
SVIP-205ENST00000533774 TPTE2Q6XPS3 522 aa16.65■□□□□ 0.26
SVIP-205ENST00000533774 NPM2Q86SE8 214 aaKnown RBP16.65■□□□□ 0.26
SVIP-205ENST00000533774 NBPF15Q8N660 670 aa16.65■□□□□ 0.26
SVIP-205ENST00000533774 ABCC12Q96J65 1359 aa16.64■□□□□ 0.26
SVIP-205ENST00000533774 MAP2K2P36507 400 aa16.64■□□□□ 0.25
SVIP-205ENST00000533774 EIF6P56537 245 aaKnown RBP16.64■□□□□ 0.25
SVIP-205ENST00000533774 C1QBPQ07021 282 aaKnown RBP16.64■□□□□ 0.25
SVIP-205ENST00000533774 JDP2Q8WYK2 163 aa16.64■□□□□ 0.25
SVIP-205ENST00000533774 LMOD1P29536 600 aaPredicted RBP16.63■□□□□ 0.25
SVIP-205ENST00000533774 ALDH1B1P30837 517 aa16.63■□□□□ 0.25
SVIP-205ENST00000533774 SAPCD2Q86UD0 394 aa16.63■□□□□ 0.25
SVIP-205ENST00000533774 ZIC5Q96T25 663 aa16.63■□□□□ 0.25
SVIP-205ENST00000533774 BTBD11A6QL63 1104 aa16.62■□□□□ 0.25
SVIP-205ENST00000533774 EIF4G2P78344 907 aaKnown RBP eCLIP16.62■□□□□ 0.25
SVIP-205ENST00000533774 DGKZQ13574 1117 aa16.62■□□□□ 0.25
SVIP-205ENST00000533774 CRY2Q49AN0 593 aa16.62■□□□□ 0.25
SVIP-205ENST00000533774 USP50Q70EL3 339 aaPredicted RBP16.62■□□□□ 0.25
SVIP-205ENST00000533774 ZNF652Q9Y2D9 606 aa16.62■□□□□ 0.25
SVIP-205ENST00000533774 NUTM1Q86Y26 1132 aa16.61■□□□□ 0.25
SVIP-205ENST00000533774 GAS2L2Q8NHY3 880 aa16.61■□□□□ 0.25
SVIP-205ENST00000533774 PHACTR3Q96KR7 559 aa16.61■□□□□ 0.25
SVIP-205ENST00000533774 LAMB4A4D0S4 1761 aa16.6■□□□□ 0.25
SVIP-205ENST00000533774 CELF2O95319 508 aaKnown RBP16.6■□□□□ 0.25
SVIP-205ENST00000533774 CIAPIN1Q6FI81 312 aa16.6■□□□□ 0.25
SVIP-205ENST00000533774 LARGE2Q8N3Y3 721 aa16.6■□□□□ 0.25
SVIP-205ENST00000533774 GLIS2Q9BZE0 524 aaPredicted RBP16.6■□□□□ 0.25
SVIP-205ENST00000533774 AKAP11Q9UKA4 1901 aa16.59■□□□□ 0.25
SVIP-205ENST00000533774 BRPF1P55201 1214 aaPredicted RBP16.59■□□□□ 0.25
SVIP-205ENST00000533774 U2SURPO15042 1029 aaKnown RBP16.58■□□□□ 0.24
SVIP-205ENST00000533774 CA12O43570 354 aa16.58■□□□□ 0.24
SVIP-205ENST00000533774 GPRC5DQ9NZD1 345 aa16.58■□□□□ 0.24
SVIP-205ENST00000533774 TIMELESSQ9UNS1 1208 aa16.58■□□□□ 0.24
SVIP-205ENST00000533774 TAF1P21675 1872 aa16.58■□□□□ 0.24
SVIP-205ENST00000533774 LAMB2P55268 1798 aa16.57■□□□□ 0.24
SVIP-205ENST00000533774 RIC1Q4ADV7 1423 aa16.57■□□□□ 0.24
SVIP-205ENST00000533774 TCERG1O14776 1098 aaKnown RBP16.57■□□□□ 0.24
SVIP-205ENST00000533774 RGL2O15211 777 aa16.57■□□□□ 0.24
SVIP-205ENST00000533774 SNRPA1P09661 255 aaKnown RBP16.57■□□□□ 0.24
SVIP-205ENST00000533774 HOXA10P31260 410 aaPredicted RBP16.57■□□□□ 0.24
SVIP-205ENST00000533774 HIRAP54198 1017 aaPredicted RBP16.57■□□□□ 0.24
SVIP-205ENST00000533774 CC2D2BQ6DHV5 1058 aa16.57■□□□□ 0.24
SVIP-205ENST00000533774 C3orf67Q6ZVT6 689 aa16.57■□□□□ 0.24
SVIP-205ENST00000533774 ADARB2Q9NS39 739 aaKnown RBP16.57■□□□□ 0.24
SVIP-205ENST00000533774 PER1O15534 1290 aaPredicted RBP16.56■□□□□ 0.24
SVIP-205ENST00000533774 GTF2E1P29083 439 aaPredicted RBP16.56■□□□□ 0.24
SVIP-205ENST00000533774 SOX10P56693 466 aa16.56■□□□□ 0.24
SVIP-205ENST00000533774 CC2D1BQ5T0F9 858 aaKnown RBP16.56■□□□□ 0.24
SVIP-205ENST00000533774 DLK2Q6UY11 383 aa16.56■□□□□ 0.24
SVIP-205ENST00000533774 HHIPL1Q96JK4 782 aa16.56■□□□□ 0.24
SVIP-205ENST00000533774 PGAP2Q9UHJ9 254 aa16.56■□□□□ 0.24
SVIP-205ENST00000533774 NPC1L1Q9UHC9 1359 aa16.55■□□□□ 0.24
SVIP-205ENST00000533774 CXCL9Q07325 125 aa16.55■□□□□ 0.24
SVIP-205ENST00000533774 AOC3Q16853 763 aa16.55■□□□□ 0.24
SVIP-205ENST00000533774 NIM1KQ8IY84 436 aa16.55■□□□□ 0.24
SVIP-205ENST00000533774 UBN2Q6ZU65 1347 aa16.54■□□□□ 0.24
SVIP-205ENST00000533774 SHTN1A0MZ66 631 aa16.54■□□□□ 0.24
SVIP-205ENST00000533774 GMPSP49915 693 aaPredicted RBP16.54■□□□□ 0.24
SVIP-205ENST00000533774 MCM10Q7L590 875 aa16.54■□□□□ 0.24
SVIP-205ENST00000533774 ZNF408Q9H9D4 720 aa16.54■□□□□ 0.24
SVIP-205ENST00000533774 DLG5Q8TDM6 1919 aa16.54■□□□□ 0.24
SVIP-205ENST00000533774 KIF7Q2M1P5 1343 aa16.53■□□□□ 0.24
SVIP-205ENST00000533774 PPEF1O14829 653 aaPredicted RBP16.53■□□□□ 0.24
SVIP-205ENST00000533774 PPIP5K2O43314 1243 aa16.53■□□□□ 0.24
SVIP-205ENST00000533774 TRPM4Q8TD43 1214 aa16.53■□□□□ 0.24
SVIP-205ENST00000533774 RPGRQ92834 1020 aaKnown RBP16.53■□□□□ 0.24
SVIP-205ENST00000533774 PRKAR2BP31323 418 aa16.52■□□□□ 0.24
SVIP-205ENST00000533774 DCTN1Q14203 1278 aa16.52■□□□□ 0.24
SVIP-205ENST00000533774 TTLL7Q6ZT98 887 aa16.52■□□□□ 0.24
SVIP-205ENST00000533774 NGEFQ8N5V2 710 aa16.52■□□□□ 0.24
SVIP-205ENST00000533774 CRAMP1Q96RY5 1269 aa16.52■□□□□ 0.24
SVIP-205ENST00000533774 RSPH6AQ9H0K4 717 aa16.52■□□□□ 0.24
SVIP-205ENST00000533774 KDM3BQ7LBC6 1761 aa16.51■□□□□ 0.23
SVIP-205ENST00000533774 GPTP24298 496 aa16.51■□□□□ 0.23
SVIP-205ENST00000533774 SUSD4Q5VX71 490 aa16.51■□□□□ 0.23
SVIP-205ENST00000533774 NYXQ9GZU5 481 aa16.51■□□□□ 0.23
SVIP-205ENST00000533774 FAM155AB1AL88 458 aaPredicted RBP16.5■□□□□ 0.23
SVIP-205ENST00000533774 NOGQ13253 232 aa16.5■□□□□ 0.23
SVIP-205ENST00000533774 GRIPAP1Q4V328 841 aa16.5■□□□□ 0.23
SVIP-205ENST00000533774 RBM17Q96I25 401 aaKnown RBP16.5■□□□□ 0.23
SVIP-205ENST00000533774 MIS18AQ9NYP9 233 aa16.5■□□□□ 0.23
SVIP-205ENST00000533774 ZNRF3Q9ULT6 936 aa16.5■□□□□ 0.23
SVIP-205ENST00000533774 ANKRD36CQ5JPF3 1778 aa16.5■□□□□ 0.23
SVIP-205ENST00000533774 MAP3K15Q6ZN16 1313 aa16.49■□□□□ 0.23
SVIP-205ENST00000533774 ERVV-1B6SEH8 477 aa16.49■□□□□ 0.23
SVIP-205ENST00000533774 NTSR2O95665 410 aa16.49■□□□□ 0.23
SVIP-205ENST00000533774 HUNKP57058 714 aa16.49■□□□□ 0.23
SVIP-205ENST00000533774 CNGB1Q14028 1251 aaPredicted RBP16.49■□□□□ 0.23
SVIP-205ENST00000533774 USP48Q86UV5 1035 aa16.49■□□□□ 0.23
SVIP-205ENST00000533774 IBTKQ9P2D0 1353 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms