RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 MTX1Q13505 466 aa15.28■□□□□ 0.04
TGFBR3-211ENST00000533370 CLEC4GQ6UXB4 293 aa15.28■□□□□ 0.04
TGFBR3-211ENST00000533370 KLHL34Q8N239 644 aa15.28■□□□□ 0.04
TGFBR3-211ENST00000533370 SSH3Q8TE77 659 aa15.28■□□□□ 0.04
TGFBR3-211ENST00000533370 COL15A1P39059 1388 aa15.27■□□□□ 0.04
TGFBR3-211ENST00000533370 CAMTA2O94983 1202 aa15.27■□□□□ 0.04
TGFBR3-211ENST00000533370 APBA3O96018 575 aa15.27■□□□□ 0.04
TGFBR3-211ENST00000533370 CASP7P55210 303 aa15.27■□□□□ 0.04
TGFBR3-211ENST00000533370 PPP1R42Q7Z4L9 355 aa15.27■□□□□ 0.04
TGFBR3-211ENST00000533370 ZNF34Q8IZ26 560 aa15.27■□□□□ 0.04
TGFBR3-211ENST00000533370 SPOCK2Q92563 424 aa15.27■□□□□ 0.04
TGFBR3-211ENST00000533370 SUCLG2Q96I99 432 aa15.27■□□□□ 0.04
TGFBR3-211ENST00000533370 LRRC4BQ9NT99 713 aa15.27■□□□□ 0.04
TGFBR3-211ENST00000533370 RTCBQ9Y3I0 505 aaKnown RBP15.27■□□□□ 0.04
TGFBR3-211ENST00000533370 PNMA6EA0A0J9YXQ4 647 aa15.26■□□□□ 0.03
TGFBR3-211ENST00000533370 UBE3BQ7Z3V4 1068 aa15.26■□□□□ 0.03
TGFBR3-211ENST00000533370 KAZALD1Q96I82 304 aa15.26■□□□□ 0.03
TGFBR3-211ENST00000533370 ZNF652Q9Y2D9 606 aa15.26■□□□□ 0.03
TGFBR3-211ENST00000533370 RREB1Q92766 1687 aa15.25■□□□□ 0.03
TGFBR3-211ENST00000533370 GNPATO15228 680 aa15.25■□□□□ 0.03
TGFBR3-211ENST00000533370 SRGAP3O43295 1099 aa15.25■□□□□ 0.03
TGFBR3-211ENST00000533370 PCCAP05165 728 aaPredicted RBP15.25■□□□□ 0.03
TGFBR3-211ENST00000533370 TXNRD1Q16881 649 aa15.25■□□□□ 0.03
TGFBR3-211ENST00000533370 ANKRD45Q5TZF3 282 aa15.25■□□□□ 0.03
TGFBR3-211ENST00000533370 NLRP10Q86W26 655 aa15.25■□□□□ 0.03
TGFBR3-211ENST00000533370 CHD1LQ86WJ1 897 aa15.25■□□□□ 0.03
TGFBR3-211ENST00000533370 ZBTB38Q8NAP3 1195 aaPredicted RBP15.25■□□□□ 0.03
TGFBR3-211ENST00000533370 AK7Q96M32 723 aa15.25■□□□□ 0.03
TGFBR3-211ENST00000533370 ZBTB47Q9UFB7 747 aaPredicted RBP15.25■□□□□ 0.03
TGFBR3-211ENST00000533370 PARP10Q53GL7 1025 aa15.24■□□□□ 0.03
TGFBR3-211ENST00000533370 TRAPPC3LQ5T215 181 aa15.24■□□□□ 0.03
TGFBR3-211ENST00000533370 BICC1Q9H694 974 aaKnown RBP15.24■□□□□ 0.03
TGFBR3-211ENST00000533370 NARFQ9UHQ1 456 aa15.24■□□□□ 0.03
TGFBR3-211ENST00000533370 ARFGEF2Q9Y6D5 1785 aa15.24■□□□□ 0.03
TGFBR3-211ENST00000533370 LY75O60449 1722 aa15.23■□□□□ 0.03
TGFBR3-211ENST00000533370 RAB11FIP3O75154 756 aa15.23■□□□□ 0.03
TGFBR3-211ENST00000533370 ZPR1O75312 459 aa15.23■□□□□ 0.03
TGFBR3-211ENST00000533370 GPTP24298 496 aa15.23■□□□□ 0.03
TGFBR3-211ENST00000533370 RABL6Q3YEC7 729 aaPredicted RBP15.23■□□□□ 0.03
TGFBR3-211ENST00000533370 HSP90AB4PQ58FF6 505 aa15.23■□□□□ 0.03
TGFBR3-211ENST00000533370 JARID2Q92833 1246 aaPredicted RBP15.23■□□□□ 0.03
TGFBR3-211ENST00000533370 ARHGEF1Q92888 912 aaKnown RBP15.23■□□□□ 0.03
TGFBR3-211ENST00000533370 COL5A3P25940 1745 aaPredicted RBP15.23■□□□□ 0.03
TGFBR3-211ENST00000533370 NUP188Q5SRE5 1749 aa15.23■□□□□ 0.03
TGFBR3-211ENST00000533370 FOXO4P98177 505 aa15.22■□□□□ 0.03
TGFBR3-211ENST00000533370 PLCD3Q8N3E9 789 aa15.22■□□□□ 0.03
TGFBR3-211ENST00000533370 PLA2G12BQ9BX93 195 aa15.22■□□□□ 0.03
TGFBR3-211ENST00000533370 NOP58Q9Y2X3 529 aaKnown RBP15.22■□□□□ 0.03
TGFBR3-211ENST00000533370 SURF6O75683 361 aaKnown RBP15.21■□□□□ 0.03
TGFBR3-211ENST00000533370 HSP90B1P14625 803 aaKnown RBP15.21■□□□□ 0.03
TGFBR3-211ENST00000533370 RFC4P35249 363 aa15.21■□□□□ 0.03
TGFBR3-211ENST00000533370 RGS3P49796 1198 aa15.21■□□□□ 0.03
TGFBR3-211ENST00000533370 EPHA10Q5JZY3 1008 aa15.21■□□□□ 0.03
TGFBR3-211ENST00000533370 FAM89AQ96GI7 184 aa15.21■□□□□ 0.03
TGFBR3-211ENST00000533370 UTP14AQ9BVJ6 771 aaKnown RBP15.21■□□□□ 0.03
TGFBR3-211ENST00000533370 TRMT112Q9UI30 125 aaKnown RBP15.21■□□□□ 0.03
TGFBR3-211ENST00000533370 MYH14Q7Z406 1995 aaKnown RBP15.21■□□□□ 0.03
TGFBR3-211ENST00000533370 CDHR2Q9BYE9 1310 aa15.2■□□□□ 0.02
TGFBR3-211ENST00000533370 LMBR1LQ6UX01 489 aa15.2■□□□□ 0.02
TGFBR3-211ENST00000533370 SKAP1Q86WV1 359 aa15.2■□□□□ 0.02
TGFBR3-211ENST00000533370 LNPKQ9C0E8 428 aa15.2■□□□□ 0.02
TGFBR3-211ENST00000533370 NIP7Q9Y221 180 aaKnown RBP eCLIP15.2■□□□□ 0.02
TGFBR3-211ENST00000533370 SSFA2P28290 1259 aa15.19■□□□□ 0.02
TGFBR3-211ENST00000533370 RTL5Q5HYW3 569 aaPredicted RBP15.19■□□□□ 0.02
TGFBR3-211ENST00000533370 SUSD4Q5VX71 490 aa15.19■□□□□ 0.02
TGFBR3-211ENST00000533370 USPL1Q5W0Q7 1092 aa15.19■□□□□ 0.02
TGFBR3-211ENST00000533370 LRRCC1Q9C099 1032 aa15.19■□□□□ 0.02
TGFBR3-211ENST00000533370 EXOC6BQ9Y2D4 811 aa15.19■□□□□ 0.02
TGFBR3-211ENST00000533370 UBN2Q6ZU65 1347 aa15.18■□□□□ 0.02
TGFBR3-211ENST00000533370 CSF1RP07333 972 aa15.18■□□□□ 0.02
TGFBR3-211ENST00000533370 PDE4AP27815 886 aa15.18■□□□□ 0.02
TGFBR3-211ENST00000533370 SMIM5Q71RC9 77 aa15.18■□□□□ 0.02
TGFBR3-211ENST00000533370 ERC1Q8IUD2 1116 aa15.18■□□□□ 0.02
TGFBR3-211ENST00000533370 BCL2L12Q9HB09 334 aa15.18■□□□□ 0.02
TGFBR3-211ENST00000533370 COPRSQ9NQ92 184 aa15.18■□□□□ 0.02
TGFBR3-211ENST00000533370 SH3TC1Q8TE82 1336 aa15.17■□□□□ 0.02
TGFBR3-211ENST00000533370 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.17■□□□□ 0.02
TGFBR3-211ENST00000533370 APBB1O00213 710 aa15.17■□□□□ 0.02
TGFBR3-211ENST00000533370 IRS4O14654 1257 aaPredicted RBP15.17■□□□□ 0.02
TGFBR3-211ENST00000533370 G3BP1Q13283 466 aaKnown RBP eCLIP15.17■□□□□ 0.02
TGFBR3-211ENST00000533370 FLAD1Q8NFF5 587 aa15.17■□□□□ 0.02
TGFBR3-211ENST00000533370 KIF1BPQ96EK5 621 aa15.17■□□□□ 0.02
TGFBR3-211ENST00000533370 SETDB2Q96T68 719 aa15.17■□□□□ 0.02
TGFBR3-211ENST00000533370 SRP68Q9UHB9 627 aaKnown RBP15.17■□□□□ 0.02
TGFBR3-211ENST00000533370 C4BP0C0L5 1744 aa15.17■□□□□ 0.02
TGFBR3-211ENST00000533370 PDE8AO60658 829 aa15.16■□□□□ 0.02
TGFBR3-211ENST00000533370 PHF14O94880 888 aa15.16■□□□□ 0.02
TGFBR3-211ENST00000533370 RFX5P48382 616 aaPredicted RBP15.16■□□□□ 0.02
TGFBR3-211ENST00000533370 SF3B2Q13435 895 aaKnown RBP15.16■□□□□ 0.02
TGFBR3-211ENST00000533370 OS9Q13438 667 aaPredicted RBP15.16■□□□□ 0.02
TGFBR3-211ENST00000533370 AMIGO3Q86WK7 504 aa15.16■□□□□ 0.02
TGFBR3-211ENST00000533370 AKT1S1Q96B36 256 aa15.16■□□□□ 0.02
TGFBR3-211ENST00000533370 USP42Q9H9J4 1324 aaKnown RBP15.16■□□□□ 0.02
TGFBR3-211ENST00000533370 SMARCA5O60264 1052 aaPredicted RBP15.15■□□□□ 0.02
TGFBR3-211ENST00000533370 NTSR2O95665 410 aa15.15■□□□□ 0.02
TGFBR3-211ENST00000533370 PTPN12Q05209 780 aaKnown RBP15.15■□□□□ 0.02
TGFBR3-211ENST00000533370 TBC1D9BQ66K14 1250 aa15.15■□□□□ 0.02
TGFBR3-211ENST00000533370 SYNE4Q8N205 404 aa15.15■□□□□ 0.02
TGFBR3-211ENST00000533370 RHPN1Q8TCX5 695 aa15.15■□□□□ 0.02
TGFBR3-211ENST00000533370 CAMKK2Q96RR4 588 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms