RNA–Protein interactions for RNA: ENST00000532932.5

LTBP3-221, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 3,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-221ENST00000532932 DNAAF4Q8WXU2 420 aa17.5■□□□□ 0.39
LTBP3-221ENST00000532932 C9orf78Q9NZ63 289 aaPredicted RBP17.5■□□□□ 0.39
LTBP3-221ENST00000532932 NMIQ13287 307 aaPredicted RBP17.5■□□□□ 0.39
LTBP3-221ENST00000532932 CEP135Q66GS9 1140 aa17.5■□□□□ 0.39
LTBP3-221ENST00000532932 LEO1Q8WVC0 666 aaPredicted RBP17.5■□□□□ 0.39
LTBP3-221ENST00000532932 SCAND2PQ9GZW5 306 aaPredicted RBP17.5■□□□□ 0.39
LTBP3-221ENST00000532932 CCDC8Q9H0W5 538 aaPredicted RBP17.5■□□□□ 0.39
LTBP3-221ENST00000532932 A0A087WWV3 80 aa17.5■□□□□ 0.39
LTBP3-221ENST00000532932 C14orf37Q86TY3 774 aa17.5■□□□□ 0.39
LTBP3-221ENST00000532932 RIMS1Q86UR5 1692 aaKnown RBP17.5■□□□□ 0.39
LTBP3-221ENST00000532932 RBM33Q96EV2 1170 aaKnown RBP17.49■□□□□ 0.39
LTBP3-221ENST00000532932 DDX19AQ9NUU7 478 aaKnown RBP17.49■□□□□ 0.39
LTBP3-221ENST00000532932 CTNNA3Q9UI47 895 aa17.49■□□□□ 0.39
LTBP3-221ENST00000532932 TNRQ92752 1358 aa17.49■□□□□ 0.39
LTBP3-221ENST00000532932 CLSTN2Q9H4D0 955 aa17.49■□□□□ 0.39
LTBP3-221ENST00000532932 TAF6LQ9Y6J9 622 aa17.49■□□□□ 0.39
LTBP3-221ENST00000532932 PSMA5P28066 241 aa17.49■□□□□ 0.39
LTBP3-221ENST00000532932 NLRP6P59044 892 aa17.49■□□□□ 0.39
LTBP3-221ENST00000532932 NECTIN1Q15223 517 aa17.49■□□□□ 0.39
LTBP3-221ENST00000532932 TM6SF1Q9BZW5 370 aa17.49■□□□□ 0.39
LTBP3-221ENST00000532932 H3BQV1 296 aa17.48■□□□□ 0.39
LTBP3-221ENST00000532932 SLC27A2O14975 620 aa17.48■□□□□ 0.39
LTBP3-221ENST00000532932 HSP90B1P14625 803 aaKnown RBP17.48■□□□□ 0.39
LTBP3-221ENST00000532932 IFFO2Q5TF58 517 aa17.48■□□□□ 0.39
LTBP3-221ENST00000532932 BOLA2Q9H3K6 86 aa17.48■□□□□ 0.39
LTBP3-221ENST00000532932 TTC41PQ6P2S7 1318 aa17.48■□□□□ 0.39
LTBP3-221ENST00000532932 FSD1Q9BTV5 496 aa17.48■□□□□ 0.39
LTBP3-221ENST00000532932 EID1Q9Y6B2 187 aa17.48■□□□□ 0.39
LTBP3-221ENST00000532932 NPHP3Q7Z494 1330 aa17.48■□□□□ 0.39
LTBP3-221ENST00000532932 USP27XA6NNY8 438 aa17.47■□□□□ 0.39
LTBP3-221ENST00000532932 JAK2O60674 1132 aa17.47■□□□□ 0.39
LTBP3-221ENST00000532932 PAXBP1Q9Y5B6 917 aa17.47■□□□□ 0.39
LTBP3-221ENST00000532932 FLT4P35916 1363 aa17.47■□□□□ 0.39
LTBP3-221ENST00000532932 PLA2G4DQ86XP0 818 aa17.47■□□□□ 0.39
LTBP3-221ENST00000532932 SIL1Q9H173 461 aa17.47■□□□□ 0.39
LTBP3-221ENST00000532932 OVOS2A0A0J9YW53 1432 aa17.47■□□□□ 0.39
LTBP3-221ENST00000532932 OVOS2Q6IE36 1432 aa17.47■□□□□ 0.39
LTBP3-221ENST00000532932 BECN2A8MW95 431 aa17.47■□□□□ 0.39
LTBP3-221ENST00000532932 EVI5LQ96CN4 794 aa17.47■□□□□ 0.39
LTBP3-221ENST00000532932 PGBD1Q96JS3 809 aa17.47■□□□□ 0.39
LTBP3-221ENST00000532932 ROBO2Q9HCK4 1378 aa17.47■□□□□ 0.39
LTBP3-221ENST00000532932 PPFIA3O75145 1194 aa17.46■□□□□ 0.39
LTBP3-221ENST00000532932 LTKP29376 864 aa17.46■□□□□ 0.39
LTBP3-221ENST00000532932 BEND3Q5T5X7 828 aa17.46■□□□□ 0.39
LTBP3-221ENST00000532932 TDRD7Q8NHU6 1098 aaKnown RBP17.46■□□□□ 0.39
LTBP3-221ENST00000532932 MAP3K5Q99683 1374 aa17.46■□□□□ 0.39
LTBP3-221ENST00000532932 USP16Q9Y5T5 823 aa17.46■□□□□ 0.39
LTBP3-221ENST00000532932 IGSF1Q8N6C5 1336 aa17.46■□□□□ 0.39
LTBP3-221ENST00000532932 KCNQ3O43525 872 aa17.46■□□□□ 0.38
LTBP3-221ENST00000532932 PTPN14Q15678 1187 aa17.46■□□□□ 0.38
LTBP3-221ENST00000532932 ZNF215Q9UL58 517 aaPredicted RBP17.46■□□□□ 0.38
LTBP3-221ENST00000532932 ELP1O95163 1332 aa17.45■□□□□ 0.38
LTBP3-221ENST00000532932 FGD1P98174 961 aa17.45■□□□□ 0.38
LTBP3-221ENST00000532932 A0A0D9SFI3 127 aa17.45■□□□□ 0.38
LTBP3-221ENST00000532932 SKILP12757 684 aa17.45■□□□□ 0.38
LTBP3-221ENST00000532932 RNF20Q5VTR2 975 aa17.45■□□□□ 0.38
LTBP3-221ENST00000532932 BRF1Q92994 677 aa17.45■□□□□ 0.38
LTBP3-221ENST00000532932 USP6P35125 1406 aa17.45■□□□□ 0.38
LTBP3-221ENST00000532932 PLEKHG3A1L390 1219 aa17.44■□□□□ 0.38
LTBP3-221ENST00000532932 HTATSF1O43719 755 aaKnown RBP17.44■□□□□ 0.38
LTBP3-221ENST00000532932 NAP1L2Q9ULW6 460 aaPredicted RBP17.44■□□□□ 0.38
LTBP3-221ENST00000532932 CEP170BQ9Y4F5 1589 aaPredicted RBP17.44■□□□□ 0.38
LTBP3-221ENST00000532932 TTC21AQ8NDW8 1320 aa17.44■□□□□ 0.38
LTBP3-221ENST00000532932 SBNO1A3KN83 1393 aa17.44■□□□□ 0.38
LTBP3-221ENST00000532932 C11orf57Q6ZUT1 292 aaPredicted RBP17.44■□□□□ 0.38
LTBP3-221ENST00000532932 ERCC4Q92889 916 aaPredicted RBP17.44■□□□□ 0.38
LTBP3-221ENST00000532932 DDX41Q9UJV9 622 aaKnown RBP17.44■□□□□ 0.38
LTBP3-221ENST00000532932 NRKQ7Z2Y5 1582 aa17.44■□□□□ 0.38
LTBP3-221ENST00000532932 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.44■□□□□ 0.38
LTBP3-221ENST00000532932 SYTL4Q96C24 671 aaPredicted RBP17.44■□□□□ 0.38
LTBP3-221ENST00000532932 LRRC2Q9BYS8 371 aa17.44■□□□□ 0.38
LTBP3-221ENST00000532932 TUBGCP6Q96RT7 1819 aa17.43■□□□□ 0.38
LTBP3-221ENST00000532932 ANKRD1Q15327 319 aa17.43■□□□□ 0.38
LTBP3-221ENST00000532932 CWF19L2Q2TBE0 894 aaKnown RBP17.43■□□□□ 0.38
LTBP3-221ENST00000532932 MAP4K1Q92918 833 aa17.43■□□□□ 0.38
LTBP3-221ENST00000532932 KIF13AQ9H1H9 1805 aa17.43■□□□□ 0.38
LTBP3-221ENST00000532932 PEAK1Q9H792 1746 aa17.43■□□□□ 0.38
LTBP3-221ENST00000532932 C3P01024 1663 aa17.43■□□□□ 0.38
LTBP3-221ENST00000532932 ERICH4A6NGS2 130 aa17.43■□□□□ 0.38
LTBP3-221ENST00000532932 RPS6KB1P23443 525 aa17.43■□□□□ 0.38
LTBP3-221ENST00000532932 G3BP1Q13283 466 aaKnown RBP eCLIP17.43■□□□□ 0.38
LTBP3-221ENST00000532932 LRRC8AQ8IWT6 810 aa17.43■□□□□ 0.38
LTBP3-221ENST00000532932 LGR6Q9HBX8 967 aa17.43■□□□□ 0.38
LTBP3-221ENST00000532932 KIF18AQ8NI77 898 aa17.42■□□□□ 0.38
LTBP3-221ENST00000532932 EDC3Q96F86 508 aaKnown RBP17.42■□□□□ 0.38
LTBP3-221ENST00000532932 MON2Q7Z3U7 1717 aa17.42■□□□□ 0.38
LTBP3-221ENST00000532932 CCDC69A6NI79 296 aa17.42■□□□□ 0.38
LTBP3-221ENST00000532932 ELF2Q15723 593 aa17.42■□□□□ 0.38
LTBP3-221ENST00000532932 FTOQ9C0B1 505 aaKnown RBP eCLIP17.42■□□□□ 0.38
LTBP3-221ENST00000532932 TLR7Q9NYK1 1049 aaKnown RBP17.42■□□□□ 0.38
LTBP3-221ENST00000532932 TOB2Q14106 344 aaPredicted RBP17.42■□□□□ 0.38
LTBP3-221ENST00000532932 MAP3K2Q9Y2U5 619 aa17.42■□□□□ 0.38
LTBP3-221ENST00000532932 CCDC9Q9Y3X0 531 aaKnown RBP17.42■□□□□ 0.38
LTBP3-221ENST00000532932 EAF2Q96CJ1 260 aaPredicted RBP17.41■□□□□ 0.38
LTBP3-221ENST00000532932 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.41■□□□□ 0.38
LTBP3-221ENST00000532932 KDRP35968 1356 aa17.41■□□□□ 0.38
LTBP3-221ENST00000532932 AIMP1Q12904 312 aaKnown RBP17.41■□□□□ 0.38
LTBP3-221ENST00000532932 KMT5BQ4FZB7 885 aa17.41■□□□□ 0.38
LTBP3-221ENST00000532932 ITSN1Q15811 1721 aa17.4■□□□□ 0.38
LTBP3-221ENST00000532932 USP31Q70CQ4 1352 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms