RNA–Protein interactions for RNA: ENST00000532781.1

ARID1A-208, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 1 (best)

Gene ARID1A, Length 2,583 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-208ENST00000532781 DDB1Q16531 1140 aa17.1■□□□□ 0.33
ARID1A-208ENST00000532781 FAM89AQ96GI7 184 aa17.1■□□□□ 0.33
ARID1A-208ENST00000532781 CWC25Q9NXE8 425 aaPredicted RBP17.1■□□□□ 0.33
ARID1A-208ENST00000532781 KCNQ2O43526 872 aa17.1■□□□□ 0.33
ARID1A-208ENST00000532781 REC8O95072 547 aa17.09■□□□□ 0.33
ARID1A-208ENST00000532781 DEKP35659 375 aaKnown RBP17.09■□□□□ 0.33
ARID1A-208ENST00000532781 FAM182BQ5T319 152 aa17.09■□□□□ 0.33
ARID1A-208ENST00000532781 TBC1D2BQ9UPU7 963 aa17.09■□□□□ 0.33
ARID1A-208ENST00000532781 FAM98CQ17RN3 349 aaKnown RBP17.09■□□□□ 0.33
ARID1A-208ENST00000532781 ECHDC1Q9NTX5 307 aa17.09■□□□□ 0.33
ARID1A-208ENST00000532781 H7C1W4 665 aa17.08■□□□□ 0.33
ARID1A-208ENST00000532781 PTF1AQ7RTS3 328 aa17.08■□□□□ 0.33
ARID1A-208ENST00000532781 SNX21Q969T3 373 aa17.08■□□□□ 0.33
ARID1A-208ENST00000532781 TOM1O60784 492 aa17.08■□□□□ 0.32
ARID1A-208ENST00000532781 SMIM5Q71RC9 77 aa17.08■□□□□ 0.32
ARID1A-208ENST00000532781 K7ELQ4 463 aaPredicted RBP17.07■□□□□ 0.32
ARID1A-208ENST00000532781 HSP90AA1P07900 732 aaKnown RBP17.07■□□□□ 0.32
ARID1A-208ENST00000532781 CYP19A1P11511 503 aaPredicted RBP17.07■□□□□ 0.32
ARID1A-208ENST00000532781 LRRC24Q50LG9 513 aa17.07■□□□□ 0.32
ARID1A-208ENST00000532781 PUS3Q9BZE2 481 aaKnown RBP17.07■□□□□ 0.32
ARID1A-208ENST00000532781 ERBB4Q15303 1308 aa17.07■□□□□ 0.32
ARID1A-208ENST00000532781 RABL6Q3YEC7 729 aaPredicted RBP17.07■□□□□ 0.32
ARID1A-208ENST00000532781 UPF3BQ9BZI7 483 aaKnown RBP17.07■□□□□ 0.32
ARID1A-208ENST00000532781 FAM177BA6PVY3 158 aa17.06■□□□□ 0.32
ARID1A-208ENST00000532781 ERC1Q8IUD2 1116 aa17.06■□□□□ 0.32
ARID1A-208ENST00000532781 CNTROBQ8N137 903 aa17.06■□□□□ 0.32
ARID1A-208ENST00000532781 DBNLQ9UJU6 430 aaKnown RBP17.06■□□□□ 0.32
ARID1A-208ENST00000532781 AOX1Q06278 1338 aa17.06■□□□□ 0.32
ARID1A-208ENST00000532781 DTNBO60941 627 aa17.06■□□□□ 0.32
ARID1A-208ENST00000532781 GLRX3O76003 335 aaKnown RBP17.06■□□□□ 0.32
ARID1A-208ENST00000532781 STARD3NLO95772 234 aa17.05■□□□□ 0.32
ARID1A-208ENST00000532781 FAM227BQ96M60 508 aa17.05■□□□□ 0.32
ARID1A-208ENST00000532781 DBNDD2Q9BQY9 259 aa17.05■□□□□ 0.32
ARID1A-208ENST00000532781 COPRSQ9NQ92 184 aa17.05■□□□□ 0.32
ARID1A-208ENST00000532781 HDAC5Q9UQL6 1122 aa17.05■□□□□ 0.32
ARID1A-208ENST00000532781 SPATA31A5Q5VU36 1347 aa17.05■□□□□ 0.32
ARID1A-208ENST00000532781 SPATA31A7Q8IWB4 1347 aa17.05■□□□□ 0.32
ARID1A-208ENST00000532781 LARP6Q9BRS8 491 aaKnown RBP17.05■□□□□ 0.32
ARID1A-208ENST00000532781 TTC41PQ6P2S7 1318 aa17.04■□□□□ 0.32
ARID1A-208ENST00000532781 USP42Q9H9J4 1324 aaKnown RBP17.04■□□□□ 0.32
ARID1A-208ENST00000532781 TCIRG1Q13488 830 aa17.04■□□□□ 0.32
ARID1A-208ENST00000532781 RABEP1Q15276 862 aa17.04■□□□□ 0.32
ARID1A-208ENST00000532781 SLFNL1Q499Z3 407 aa17.04■□□□□ 0.32
ARID1A-208ENST00000532781 KIF6Q6ZMV9 814 aa17.04■□□□□ 0.32
ARID1A-208ENST00000532781 NGLY1Q96IV0 654 aa17.04■□□□□ 0.32
ARID1A-208ENST00000532781 NEK4P51957 841 aa17.04■□□□□ 0.32
ARID1A-208ENST00000532781 TIMM10P62072 90 aa17.04■□□□□ 0.32
ARID1A-208ENST00000532781 TNNI3KQ59H18 835 aa17.04■□□□□ 0.32
ARID1A-208ENST00000532781 FPGT-TNNI3KV9GXZ4 949 aa17.04■□□□□ 0.32
ARID1A-208ENST00000532781 SGSM2O43147 1006 aa17.03■□□□□ 0.32
ARID1A-208ENST00000532781 CPA1P15085 419 aa17.03■□□□□ 0.32
ARID1A-208ENST00000532781 PTH1RQ03431 593 aa17.03■□□□□ 0.32
ARID1A-208ENST00000532781 CCDC191Q8NCU4 936 aa17.03■□□□□ 0.32
ARID1A-208ENST00000532781 ISCA1Q9BUE6 129 aa17.03■□□□□ 0.32
ARID1A-208ENST00000532781 ATG9AQ7Z3C6 839 aa17.03■□□□□ 0.32
ARID1A-208ENST00000532781 ZGPATQ8N5A5 531 aaKnown RBP17.03■□□□□ 0.32
ARID1A-208ENST00000532781 MYH14Q7Z406 1995 aaKnown RBP17.02■□□□□ 0.32
ARID1A-208ENST00000532781 ITPK1Q13572 414 aa17.02■□□□□ 0.32
ARID1A-208ENST00000532781 COL9A3Q14050 684 aaPredicted RBP17.02■□□□□ 0.32
ARID1A-208ENST00000532781 NEUROD6Q96NK8 337 aa17.02■□□□□ 0.32
ARID1A-208ENST00000532781 NUP98P52948 1817 aa17.02■□□□□ 0.32
ARID1A-208ENST00000532781 DDIT3P35638 169 aa17.02■□□□□ 0.31
ARID1A-208ENST00000532781 ATP6V1AP38606 617 aa17.02■□□□□ 0.31
ARID1A-208ENST00000532781 PKP1Q13835 747 aa17.02■□□□□ 0.31
ARID1A-208ENST00000532781 RASEFQ8IZ41 740 aa17.02■□□□□ 0.31
ARID1A-208ENST00000532781 VSIG10Q8N0Z9 540 aa17.02■□□□□ 0.31
ARID1A-208ENST00000532781 DNAJC2Q99543 621 aaKnown RBP17.02■□□□□ 0.31
ARID1A-208ENST00000532781 DIAPH3Q9NSV4 1193 aa17.02■□□□□ 0.31
ARID1A-208ENST00000532781 MAP3K15Q6ZN16 1313 aa17.01■□□□□ 0.31
ARID1A-208ENST00000532781 CHMP5Q9NZZ3 219 aa17.01■□□□□ 0.31
ARID1A-208ENST00000532781 LRP6O75581 1613 aa17.01■□□□□ 0.31
ARID1A-208ENST00000532781 SLIT2O94813 1529 aa17.01■□□□□ 0.31
ARID1A-208ENST00000532781 GPATCH3Q96I76 525 aa17.01■□□□□ 0.31
ARID1A-208ENST00000532781 LSG1Q9H089 658 aaKnown RBP17.01■□□□□ 0.31
ARID1A-208ENST00000532781 A0A0D9SFI3 127 aa17■□□□□ 0.31
ARID1A-208ENST00000532781 NMIQ13287 307 aaPredicted RBP17■□□□□ 0.31
ARID1A-208ENST00000532781 FSD1Q9BTV5 496 aa17■□□□□ 0.31
ARID1A-208ENST00000532781 GIGYF2Q6Y7W6 1299 aaKnown RBP16.99■□□□□ 0.31
ARID1A-208ENST00000532781 DDX46Q7L014 1031 aaKnown RBP16.99■□□□□ 0.31
ARID1A-208ENST00000532781 DZIP3Q86Y13 1208 aaKnown RBP16.99■□□□□ 0.31
ARID1A-208ENST00000532781 CHAMP1Q96JM3 812 aa16.99■□□□□ 0.31
ARID1A-208ENST00000532781 UBN2Q6ZU65 1347 aa16.99■□□□□ 0.31
ARID1A-208ENST00000532781 NLRP10Q86W26 655 aa16.99■□□□□ 0.31
ARID1A-208ENST00000532781 TEX13AQ9BXU3 409 aaPredicted RBP16.99■□□□□ 0.31
ARID1A-208ENST00000532781 SSFA2P28290 1259 aa16.98■□□□□ 0.31
ARID1A-208ENST00000532781 BCL9LQ86UU0 1499 aa16.98■□□□□ 0.31
ARID1A-208ENST00000532781 LOC102724428A0A0B4J2F2 783 aa16.98■□□□□ 0.31
ARID1A-208ENST00000532781 CRKLP46109 303 aaKnown RBP16.98■□□□□ 0.31
ARID1A-208ENST00000532781 SIK1P57059 783 aa16.98■□□□□ 0.31
ARID1A-208ENST00000532781 INTS5Q6P9B9 1019 aaKnown RBP16.98■□□□□ 0.31
ARID1A-208ENST00000532781 TNPO1Q92973 898 aaKnown RBP16.98■□□□□ 0.31
ARID1A-208ENST00000532781 SEC62Q99442 399 aaKnown RBP16.98■□□□□ 0.31
ARID1A-208ENST00000532781 TAF6LQ9Y6J9 622 aa16.98■□□□□ 0.31
ARID1A-208ENST00000532781 RAD50Q92878 1312 aa16.98■□□□□ 0.31
ARID1A-208ENST00000532781 FOXD4L5Q5VV16 416 aaPredicted RBP16.97■□□□□ 0.31
ARID1A-208ENST00000532781 ZNF589Q86UQ0 364 aaPredicted RBP16.97■□□□□ 0.31
ARID1A-208ENST00000532781 FOXD4L4Q8WXT5 416 aaPredicted RBP16.97■□□□□ 0.31
ARID1A-208ENST00000532781 EVI5LQ96CN4 794 aa16.97■□□□□ 0.31
ARID1A-208ENST00000532781 CCDC129Q6ZRS4 1044 aa16.97■□□□□ 0.31
ARID1A-208ENST00000532781 GREM2Q9H772 168 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms