RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 MYCNP04198 464 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-232ENST00000532649 UTP14AQ9BVJ6 771 aaKnown RBP10.16□□□□□ -0.78
CTNND1-232ENST00000532649 CCDC39Q9UFE4 941 aa10.16□□□□□ -0.78
CTNND1-232ENST00000532649 SPTY2D1Q68D10 685 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-232ENST00000532649 CCDC82Q8N4S0 544 aa10.16□□□□□ -0.78
CTNND1-232ENST00000532649 DDX17Q92841 729 aaKnown RBP10.16□□□□□ -0.78
CTNND1-232ENST00000532649 PHACTR3Q96KR7 559 aa10.16□□□□□ -0.78
CTNND1-232ENST00000532649 RNMTO43148 476 aaKnown RBP10.15□□□□□ -0.78
CTNND1-232ENST00000532649 BAG3O95817 575 aa10.15□□□□□ -0.78
CTNND1-232ENST00000532649 HMGB1P09429 215 aaKnown RBP10.15□□□□□ -0.78
CTNND1-232ENST00000532649 LMBR1LQ6UX01 489 aa10.15□□□□□ -0.78
CTNND1-232ENST00000532649 MRPL50Q8N5N7 158 aaKnown RBP10.15□□□□□ -0.78
CTNND1-232ENST00000532649 SLC12A7Q9Y666 1083 aa10.15□□□□□ -0.78
CTNND1-232ENST00000532649 CCDC196A0A1B0GTZ2 297 aa10.15□□□□□ -0.78
CTNND1-232ENST00000532649 ALDH1L1O75891 902 aa10.15□□□□□ -0.78
CTNND1-232ENST00000532649 SLC4A8Q2Y0W8 1093 aa10.15□□□□□ -0.78
CTNND1-232ENST00000532649 PPFIBP1Q86W92 1011 aa10.15□□□□□ -0.78
CTNND1-232ENST00000532649 RHPN1Q8TCX5 695 aa10.15□□□□□ -0.78
CTNND1-232ENST00000532649 EDC4Q6P2E9 1401 aaKnown RBP10.15□□□□□ -0.78
CTNND1-232ENST00000532649 COL17A1Q9UMD9 1497 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-232ENST00000532649 IFIT3O14879 490 aaKnown RBP10.15□□□□□ -0.78
CTNND1-232ENST00000532649 UQCRFS1P1P0C7P4 283 aa10.15□□□□□ -0.79
CTNND1-232ENST00000532649 TSPOAP1O95153 1857 aa10.15□□□□□ -0.79
CTNND1-232ENST00000532649 CETN2P41208 172 aa10.15□□□□□ -0.79
CTNND1-232ENST00000532649 COMMD10Q9Y6G5 202 aa10.15□□□□□ -0.79
CTNND1-232ENST00000532649 NYXQ9GZU5 481 aa10.14□□□□□ -0.79
CTNND1-232ENST00000532649 MRE11P49959 708 aa10.14□□□□□ -0.79
CTNND1-232ENST00000532649 KRT24Q2M2I5 525 aa10.14□□□□□ -0.79
CTNND1-232ENST00000532649 IQSEC3Q9UPP2 1182 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-232ENST00000532649 ADGBQ8N7X0 1667 aa10.14□□□□□ -0.79
CTNND1-232ENST00000532649 IQCEQ6IPM2 695 aa10.14□□□□□ -0.79
CTNND1-232ENST00000532649 FERMT3Q86UX7 667 aa10.14□□□□□ -0.79
CTNND1-232ENST00000532649 PPM1EQ8WY54 764 aa10.14□□□□□ -0.79
CTNND1-232ENST00000532649 CCDC66A2RUB6 948 aa10.14□□□□□ -0.79
CTNND1-232ENST00000532649 CCDC192P0DO97 292 aa10.14□□□□□ -0.79
CTNND1-232ENST00000532649 ATP2B3Q16720 1220 aa10.14□□□□□ -0.79
CTNND1-232ENST00000532649 SLAIN2Q9P270 581 aa10.14□□□□□ -0.79
CTNND1-232ENST00000532649 CEP131Q9UPN4 1083 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 MAGI3Q5TCQ9 1506 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 CHD1O14646 1710 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 SBNO1A3KN83 1393 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 SERPINC1P01008 464 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 HAND2P61296 217 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 FEZ1Q99689 392 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 PIK3C2GO75747 1445 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 GOLGA8AA7E2F4 631 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 GOLGA8BA8MQT2 603 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 LTKP29376 864 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 WDR78Q5VTH9 848 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 TPTE2Q6XPS3 522 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 TSPYL6Q8N831 410 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 CCDC150Q8NCX0 1101 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 DHX8Q14562 1220 aaKnown RBP10.13□□□□□ -0.79
CTNND1-232ENST00000532649 CENPHQ9H3R5 247 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 HLA-DOAP06340 250 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 CA8P35219 290 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 CATIPQ7Z7H3 387 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 CEP57L1Q8IYX8 460 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 CDCA7Q9BWT1 371 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-232ENST00000532649 PARP3Q9Y6F1 533 aa10.13□□□□□ -0.79
CTNND1-232ENST00000532649 SH2B1Q9NRF2 756 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-232ENST00000532649 PODXL2Q9NZ53 605 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 TSPY2A6NKD2 308 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 MYO1BO43795 1136 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 IGHDP01880 384 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 PDE4BQ07343 736 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 CWF19L2Q2TBE0 894 aaKnown RBP10.12□□□□□ -0.79
CTNND1-232ENST00000532649 LINS1Q8NG48 757 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 WWC3Q9ULE0 1092 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 GNPATO15228 680 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 PDIA4P13667 645 aaKnown RBP10.12□□□□□ -0.79
CTNND1-232ENST00000532649 GSTO1P78417 241 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 GUCY1B3Q02153 619 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 TTC22Q5TAA0 569 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 C8orf76Q96K31 380 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 ABCA8O94911 1581 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 PLEKHH1Q9ULM0 1364 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 F8W031 263 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-232ENST00000532649 TBC1D9Q6ZT07 1266 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 PLCD3Q8N3E9 789 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 CRNKL1Q9BZJ0 848 aaKnown RBP10.12□□□□□ -0.79
CTNND1-232ENST00000532649 CIZ1Q9ULV3 898 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-232ENST00000532649 ARHGEF5Q12774 1597 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 ARHGEF10O15013 1369 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 NF2P35240 595 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 IL15P40933 162 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-232ENST00000532649 CCT2P78371 535 aaKnown RBP10.12□□□□□ -0.79
CTNND1-232ENST00000532649 NBPF14Q5TI25 921 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 PKNOX2Q96KN3 472 aa10.12□□□□□ -0.79
CTNND1-232ENST00000532649 DDX23Q9BUQ8 820 aaKnown RBP10.12□□□□□ -0.79
CTNND1-232ENST00000532649 IRS4O14654 1257 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-232ENST00000532649 PPP1R12BO60237 982 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-232ENST00000532649 CEP63Q96MT8 703 aa10.11□□□□□ -0.79
CTNND1-232ENST00000532649 SSRP1Q08945 709 aaKnown RBP10.11□□□□□ -0.79
CTNND1-232ENST00000532649 MFSD6Q6ZSS7 791 aa10.11□□□□□ -0.79
CTNND1-232ENST00000532649 TAF4BQ92750 862 aa10.11□□□□□ -0.79
CTNND1-232ENST00000532649 CUL5Q93034 780 aa10.11□□□□□ -0.79
CTNND1-232ENST00000532649 LARP6Q9BRS8 491 aaKnown RBP10.11□□□□□ -0.79
CTNND1-232ENST00000532649 CABP5Q9NP86 173 aa10.11□□□□□ -0.79
CTNND1-232ENST00000532649 FAM98CQ17RN3 349 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms