RNA–Protein interactions for RNA: ENST00000532330.5

BRPF3-209, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-209ENST00000532330 SGSM2O43147 1006 aa13.29□□□□□ -0.28
BRPF3-209ENST00000532330 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
BRPF3-209ENST00000532330 ISCA1Q9BUE6 129 aa13.29□□□□□ -0.28
BRPF3-209ENST00000532330 MAP3K15Q6ZN16 1313 aa13.29□□□□□ -0.28
BRPF3-209ENST00000532330 BCL9O00512 1426 aa13.29□□□□□ -0.28
BRPF3-209ENST00000532330 ANKRD1Q15327 319 aa13.29□□□□□ -0.28
BRPF3-209ENST00000532330 ZNF652Q9Y2D9 606 aa13.29□□□□□ -0.28
BRPF3-209ENST00000532330 SPATA31A1Q5TZJ5 1347 aa13.29□□□□□ -0.28
BRPF3-209ENST00000532330 L1TD1Q5T7N2 865 aaKnown RBP13.29□□□□□ -0.28
BRPF3-209ENST00000532330 ARFGEF2Q9Y6D5 1785 aa13.28□□□□□ -0.28
BRPF3-209ENST00000532330 PRAMEF22A3QJZ6 481 aa13.28□□□□□ -0.28
BRPF3-209ENST00000532330 PTCD1O75127 700 aaKnown RBP13.28□□□□□ -0.28
BRPF3-209ENST00000532330 KCNJ4P48050 445 aa13.28□□□□□ -0.28
BRPF3-209ENST00000532330 PARP10Q53GL7 1025 aa13.28□□□□□ -0.28
BRPF3-209ENST00000532330 TM6SF1Q9BZW5 370 aa13.28□□□□□ -0.28
BRPF3-209ENST00000532330 CEP126Q9P2H0 1117 aa13.28□□□□□ -0.28
BRPF3-209ENST00000532330 FSD1Q9BTV5 496 aa13.27□□□□□ -0.28
BRPF3-209ENST00000532330 CHMP3Q9Y3E7 222 aa13.27□□□□□ -0.28
BRPF3-209ENST00000532330 JCADQ9P266 1359 aa13.27□□□□□ -0.29
BRPF3-209ENST00000532330 HSPA4P34932 840 aa13.27□□□□□ -0.29
BRPF3-209ENST00000532330 GIGYF2Q6Y7W6 1299 aaKnown RBP13.27□□□□□ -0.29
BRPF3-209ENST00000532330 PIGBQ92521 554 aa13.27□□□□□ -0.29
BRPF3-209ENST00000532330 ZBTB38Q8NAP3 1195 aaPredicted RBP13.27□□□□□ -0.29
BRPF3-209ENST00000532330 SPATA31A6Q5VVP1 1343 aa13.27□□□□□ -0.29
BRPF3-209ENST00000532330 GSE1Q14687 1217 aa13.26□□□□□ -0.29
BRPF3-209ENST00000532330 TNNI3KQ59H18 835 aa13.26□□□□□ -0.29
BRPF3-209ENST00000532330 CCDC158Q5M9N0 1113 aa13.26□□□□□ -0.29
BRPF3-209ENST00000532330 FPGT-TNNI3KV9GXZ4 949 aa13.26□□□□□ -0.29
BRPF3-209ENST00000532330 NBPF26B4DH59 902 aa13.26□□□□□ -0.29
BRPF3-209ENST00000532330 EYA2O00167 538 aa13.26□□□□□ -0.29
BRPF3-209ENST00000532330 NBPF14Q5TI25 921 aa13.26□□□□□ -0.29
BRPF3-209ENST00000532330 ZSCAN25Q6NSZ9 544 aa13.26□□□□□ -0.29
BRPF3-209ENST00000532330 NBPF10Q6P3W6 841 aaKnown RBP13.26□□□□□ -0.29
BRPF3-209ENST00000532330 NBPF15Q8N660 670 aa13.26□□□□□ -0.29
BRPF3-209ENST00000532330 AFDNP55196 1824 aaKnown RBP13.26□□□□□ -0.29
BRPF3-209ENST00000532330 SPATA31A5Q5VU36 1347 aa13.26□□□□□ -0.29
BRPF3-209ENST00000532330 SPATA31A7Q8IWB4 1347 aa13.26□□□□□ -0.29
BRPF3-209ENST00000532330 LMBR1LQ6UX01 489 aa13.26□□□□□ -0.29
BRPF3-209ENST00000532330 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.26□□□□□ -0.29
BRPF3-209ENST00000532330 ZFYP08048 801 aaPredicted RBP13.25□□□□□ -0.29
BRPF3-209ENST00000532330 SH2B1Q9NRF2 756 aaPredicted RBP13.25□□□□□ -0.29
BRPF3-209ENST00000532330 CCDC9Q9Y3X0 531 aaKnown RBP13.25□□□□□ -0.29
BRPF3-209ENST00000532330 WNK3Q9BYP7 1800 aa13.25□□□□□ -0.29
BRPF3-209ENST00000532330 MCM4P33991 863 aa13.25□□□□□ -0.29
BRPF3-209ENST00000532330 IFIT5Q13325 482 aaKnown RBP13.25□□□□□ -0.29
BRPF3-209ENST00000532330 SNRKQ9NRH2 765 aa13.25□□□□□ -0.29
BRPF3-209ENST00000532330 COL16A1Q07092 1604 aaPredicted RBP13.25□□□□□ -0.29
BRPF3-209ENST00000532330 NEK4P51957 841 aa13.25□□□□□ -0.29
BRPF3-209ENST00000532330 GORABQ5T7V8 394 aa13.25□□□□□ -0.29
BRPF3-209ENST00000532330 KIF2CQ99661 725 aa13.25□□□□□ -0.29
BRPF3-209ENST00000532330 ATP6V1DQ9Y5K8 247 aa13.25□□□□□ -0.29
BRPF3-209ENST00000532330 RAB3GAP1Q15042 981 aa13.24□□□□□ -0.29
BRPF3-209ENST00000532330 SHANK3Q9BYB0 1731 aa13.24□□□□□ -0.29
BRPF3-209ENST00000532330 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
BRPF3-209ENST00000532330 A1BGP04217 495 aa13.24□□□□□ -0.29
BRPF3-209ENST00000532330 CASP7P55210 303 aa13.24□□□□□ -0.29
BRPF3-209ENST00000532330 PTPN12Q05209 780 aaKnown RBP13.24□□□□□ -0.29
BRPF3-209ENST00000532330 CSPP1Q1MSJ5 1256 aa13.24□□□□□ -0.29
BRPF3-209ENST00000532330 ANKRD18BA2A2Z9 1011 aa13.24□□□□□ -0.29
BRPF3-209ENST00000532330 DNAJC10Q8IXB1 793 aa13.24□□□□□ -0.29
BRPF3-209ENST00000532330 ATP5J2-PTCD1G3V325 749 aa13.24□□□□□ -0.29
BRPF3-209ENST00000532330 DEKP35659 375 aaKnown RBP13.24□□□□□ -0.29
BRPF3-209ENST00000532330 RFX5P48382 616 aaPredicted RBP13.24□□□□□ -0.29
BRPF3-209ENST00000532330 UNC5CLQ8IV45 518 aa13.24□□□□□ -0.29
BRPF3-209ENST00000532330 ZBTB3Q9H5J0 574 aa13.24□□□□□ -0.29
BRPF3-209ENST00000532330 CCDC87Q9NVE4 849 aa13.24□□□□□ -0.29
BRPF3-209ENST00000532330 SASH1O94885 1247 aa13.23□□□□□ -0.29
BRPF3-209ENST00000532330 HMGB1P09429 215 aaKnown RBP13.23□□□□□ -0.29
BRPF3-209ENST00000532330 CLEC17AQ6ZS10 378 aa13.23□□□□□ -0.29
BRPF3-209ENST00000532330 CYP46A1Q9Y6A2 500 aa13.23□□□□□ -0.29
BRPF3-209ENST00000532330 GLI3P10071 1580 aa13.23□□□□□ -0.29
BRPF3-209ENST00000532330 CYP19A1P11511 503 aaPredicted RBP13.23□□□□□ -0.29
BRPF3-209ENST00000532330 KAZALD1Q96I82 304 aa13.23□□□□□ -0.29
BRPF3-209ENST00000532330 HELLSQ9NRZ9 838 aa13.23□□□□□ -0.29
BRPF3-209ENST00000532330 PA2G4Q9UQ80 394 aaKnown RBP13.23□□□□□ -0.29
BRPF3-209ENST00000532330 VPS72Q15906 364 aa13.23□□□□□ -0.29
BRPF3-209ENST00000532330 KLHL34Q8N239 644 aa13.23□□□□□ -0.29
BRPF3-209ENST00000532330 AK9Q5TCS8 1911 aa13.22□□□□□ -0.29
BRPF3-209ENST00000532330 NUP188Q5SRE5 1749 aa13.22□□□□□ -0.29
BRPF3-209ENST00000532330 HAUS7Q99871 368 aa13.22□□□□□ -0.29
BRPF3-209ENST00000532330 NCLP19338 710 aaKnown RBP13.22□□□□□ -0.29
BRPF3-209ENST00000532330 FOXO4P98177 505 aa13.22□□□□□ -0.29
BRPF3-209ENST00000532330 TTF1Q15361 905 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-209ENST00000532330 TTLL7Q6ZT98 887 aa13.22□□□□□ -0.29
BRPF3-209ENST00000532330 EAF2Q96CJ1 260 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-209ENST00000532330 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.22□□□□□ -0.29
BRPF3-209ENST00000532330 SIL1Q9H173 461 aa13.22□□□□□ -0.29
BRPF3-209ENST00000532330 PDE8AO60658 829 aa13.22□□□□□ -0.29
BRPF3-209ENST00000532330 SYTL4Q96C24 671 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-209ENST00000532330 KIF3AQ9Y496 699 aa13.22□□□□□ -0.29
BRPF3-209ENST00000532330 SLIT2O94813 1529 aa13.22□□□□□ -0.29
BRPF3-209ENST00000532330 KCNB2Q92953 911 aa13.21□□□□□ -0.29
BRPF3-209ENST00000532330 CTNNA3Q9UI47 895 aa13.21□□□□□ -0.29
BRPF3-209ENST00000532330 CICQ96RK0 1608 aaPredicted RBP13.21□□□□□ -0.29
BRPF3-209ENST00000532330 SPEF2Q9C093 1822 aa13.21□□□□□ -0.29
BRPF3-209ENST00000532330 CCDC171Q6TFL3 1326 aa13.21□□□□□ -0.29
BRPF3-209ENST00000532330 UQCRFS1P1P0C7P4 283 aa13.21□□□□□ -0.29
BRPF3-209ENST00000532330 DDIT3P35638 169 aa13.21□□□□□ -0.29
BRPF3-209ENST00000532330 CWC27Q6UX04 472 aaKnown RBP13.21□□□□□ -0.29
BRPF3-209ENST00000532330 DZIP3Q86Y13 1208 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms