RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 HLFQ16534 295 aa18.51■□□□□ 0.55
SRPRA-206ENST00000532259 NOL8Q76FK4 1167 aaKnown RBP18.51■□□□□ 0.55
SRPRA-206ENST00000532259 CCDC85AQ96PX6 553 aaPredicted RBP18.51■□□□□ 0.55
SRPRA-206ENST00000532259 CHMP5Q9NZZ3 219 aa18.51■□□□□ 0.55
SRPRA-206ENST00000532259 ZBTB1Q9Y2K1 713 aa18.51■□□□□ 0.55
SRPRA-206ENST00000532259 TTC41PQ6P2S7 1318 aa18.51■□□□□ 0.55
SRPRA-206ENST00000532259 GLRX3O76003 335 aaKnown RBP18.51■□□□□ 0.55
SRPRA-206ENST00000532259 ZNF594Q96JF6 807 aaPredicted RBP18.51■□□□□ 0.55
SRPRA-206ENST00000532259 COPRSQ9NQ92 184 aa18.51■□□□□ 0.55
SRPRA-206ENST00000532259 NDUFB9Q9Y6M9 179 aa18.51■□□□□ 0.55
SRPRA-206ENST00000532259 STARD3NLO95772 234 aa18.5■□□□□ 0.55
SRPRA-206ENST00000532259 CYP19A1P11511 503 aaPredicted RBP18.5■□□□□ 0.55
SRPRA-206ENST00000532259 VSIG10Q8N0Z9 540 aa18.5■□□□□ 0.55
SRPRA-206ENST00000532259 BOLA2Q9H3K6 86 aa18.5■□□□□ 0.55
SRPRA-206ENST00000532259 AK9Q5TCS8 1911 aa18.5■□□□□ 0.55
SRPRA-206ENST00000532259 EIF5BO60841 1220 aaKnown RBP18.5■□□□□ 0.55
SRPRA-206ENST00000532259 GPTP24298 496 aa18.49■□□□□ 0.55
SRPRA-206ENST00000532259 EDC3Q96F86 508 aaKnown RBP18.49■□□□□ 0.55
SRPRA-206ENST00000532259 FAM89AQ96GI7 184 aa18.49■□□□□ 0.55
SRPRA-206ENST00000532259 NRAPQ86VF7 1730 aa18.49■□□□□ 0.55
SRPRA-206ENST00000532259 SPATA31A5Q5VU36 1347 aa18.49■□□□□ 0.55
SRPRA-206ENST00000532259 SPATA31A7Q8IWB4 1347 aa18.49■□□□□ 0.55
SRPRA-206ENST00000532259 TJP1Q07157 1748 aa18.49■□□□□ 0.55
SRPRA-206ENST00000532259 TCIRG1Q13488 830 aa18.49■□□□□ 0.55
SRPRA-206ENST00000532259 CCDC191Q8NCU4 936 aa18.49■□□□□ 0.55
SRPRA-206ENST00000532259 GPATCH3Q96I76 525 aa18.49■□□□□ 0.55
SRPRA-206ENST00000532259 C8orf37Q96NL8 207 aa18.49■□□□□ 0.55
SRPRA-206ENST00000532259 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.49■□□□□ 0.55
SRPRA-206ENST00000532259 NEK4P51957 841 aa18.48■□□□□ 0.55
SRPRA-206ENST00000532259 ISCA1Q9BUE6 129 aa18.48■□□□□ 0.55
SRPRA-206ENST00000532259 DOT1LQ8TEK3 1739 aa18.48■□□□□ 0.55
SRPRA-206ENST00000532259 KCNQ2O43526 872 aa18.48■□□□□ 0.55
SRPRA-206ENST00000532259 DDIT3P35638 169 aa18.48■□□□□ 0.55
SRPRA-206ENST00000532259 DBNLQ9UJU6 430 aaKnown RBP18.48■□□□□ 0.55
SRPRA-206ENST00000532259 WNK3Q9BYP7 1800 aa18.47■□□□□ 0.55
SRPRA-206ENST00000532259 TEX13AQ9BXU3 409 aaPredicted RBP18.47■□□□□ 0.55
SRPRA-206ENST00000532259 UPF3BQ9BZI7 483 aaKnown RBP18.47■□□□□ 0.55
SRPRA-206ENST00000532259 TBC1D2BQ9UPU7 963 aa18.47■□□□□ 0.55
SRPRA-206ENST00000532259 SGSM2O43147 1006 aa18.47■□□□□ 0.55
SRPRA-206ENST00000532259 FAM98CQ17RN3 349 aaKnown RBP18.47■□□□□ 0.55
SRPRA-206ENST00000532259 DIAPH3Q9NSV4 1193 aa18.47■□□□□ 0.55
SRPRA-206ENST00000532259 LRRC24Q50LG9 513 aa18.46■□□□□ 0.55
SRPRA-206ENST00000532259 KIF6Q6ZMV9 814 aa18.46■□□□□ 0.55
SRPRA-206ENST00000532259 ST18O60284 1047 aa18.46■□□□□ 0.55
SRPRA-206ENST00000532259 TNNI3KQ59H18 835 aa18.46■□□□□ 0.55
SRPRA-206ENST00000532259 DBNDD2Q9BQY9 259 aa18.46■□□□□ 0.55
SRPRA-206ENST00000532259 PUS3Q9BZE2 481 aaKnown RBP18.46■□□□□ 0.55
SRPRA-206ENST00000532259 FPGT-TNNI3KV9GXZ4 949 aa18.46■□□□□ 0.55
SRPRA-206ENST00000532259 COL15A1P39059 1388 aa18.45■□□□□ 0.54
SRPRA-206ENST00000532259 CHGBP05060 677 aa18.45■□□□□ 0.54
SRPRA-206ENST00000532259 MCCP23508 829 aa18.45■□□□□ 0.54
SRPRA-206ENST00000532259 ATG9AQ7Z3C6 839 aa18.45■□□□□ 0.54
SRPRA-206ENST00000532259 FAM227BQ96M60 508 aa18.45■□□□□ 0.54
SRPRA-206ENST00000532259 SLIT2O94813 1529 aa18.45■□□□□ 0.54
SRPRA-206ENST00000532259 MAP3K15Q6ZN16 1313 aa18.45■□□□□ 0.54
SRPRA-206ENST00000532259 NGLY1Q96IV0 654 aa18.44■□□□□ 0.54
SRPRA-206ENST00000532259 THRAP3Q9Y2W1 955 aaKnown RBP18.44■□□□□ 0.54
SRPRA-206ENST00000532259 KCNQ4P56696 695 aa18.43■□□□□ 0.54
SRPRA-206ENST00000532259 TIMM10P62072 90 aa18.43■□□□□ 0.54
SRPRA-206ENST00000532259 PTH1RQ03431 593 aa18.43■□□□□ 0.54
SRPRA-206ENST00000532259 GIGYF2Q6Y7W6 1299 aaKnown RBP18.43■□□□□ 0.54
SRPRA-206ENST00000532259 ZGPATQ8N5A5 531 aaKnown RBP18.43■□□□□ 0.54
SRPRA-206ENST00000532259 LSG1Q9H089 658 aaKnown RBP18.43■□□□□ 0.54
SRPRA-206ENST00000532259 PTF1AQ7RTS3 328 aa18.43■□□□□ 0.54
SRPRA-206ENST00000532259 NEUROD6Q96NK8 337 aa18.43■□□□□ 0.54
SRPRA-206ENST00000532259 CDCA7Q9BWT1 371 aaPredicted RBP18.43■□□□□ 0.54
SRPRA-206ENST00000532259 LRP6O75581 1613 aa18.42■□□□□ 0.54
SRPRA-206ENST00000532259 KIAA1211Q6ZU35 1233 aa18.42■□□□□ 0.54
SRPRA-206ENST00000532259 TNPO1Q92973 898 aaKnown RBP18.42■□□□□ 0.54
SRPRA-206ENST00000532259 EVI5LQ96CN4 794 aa18.42■□□□□ 0.54
SRPRA-206ENST00000532259 FSD1Q9BTV5 496 aa18.42■□□□□ 0.54
SRPRA-206ENST00000532259 ATP6V1AP38606 617 aa18.42■□□□□ 0.54
SRPRA-206ENST00000532259 ITPK1Q13572 414 aa18.42■□□□□ 0.54
SRPRA-206ENST00000532259 RASEFQ8IZ41 740 aa18.42■□□□□ 0.54
SRPRA-206ENST00000532259 DNAJC2Q99543 621 aaKnown RBP18.42■□□□□ 0.54
SRPRA-206ENST00000532259 MCM4P33991 863 aa18.41■□□□□ 0.54
SRPRA-206ENST00000532259 NLRP10Q86W26 655 aa18.41■□□□□ 0.54
SRPRA-206ENST00000532259 LARP6Q9BRS8 491 aaKnown RBP18.41■□□□□ 0.54
SRPRA-206ENST00000532259 HSPA4P34932 840 aa18.41■□□□□ 0.54
SRPRA-206ENST00000532259 GSE1Q14687 1217 aa18.41■□□□□ 0.54
SRPRA-206ENST00000532259 FAM182BQ5T319 152 aa18.41■□□□□ 0.54
SRPRA-206ENST00000532259 DZIP3Q86Y13 1208 aaKnown RBP18.41■□□□□ 0.54
SRPRA-206ENST00000532259 SSFA2P28290 1259 aa18.4■□□□□ 0.54
SRPRA-206ENST00000532259 NMIQ13287 307 aaPredicted RBP18.4■□□□□ 0.54
SRPRA-206ENST00000532259 INTS5Q6P9B9 1019 aaKnown RBP18.4■□□□□ 0.54
SRPRA-206ENST00000532259 RAD50Q92878 1312 aa18.4■□□□□ 0.54
SRPRA-206ENST00000532259 EP400Q96L91 3159 aa18.4■□□□□ 0.54
SRPRA-206ENST00000532259 LOC102724428A0A0B4J2F2 783 aa18.4■□□□□ 0.54
SRPRA-206ENST00000532259 A0A0D9SFI3 127 aa18.4■□□□□ 0.54
SRPRA-206ENST00000532259 FAM177BA6PVY3 158 aa18.4■□□□□ 0.54
SRPRA-206ENST00000532259 CPA1P15085 419 aa18.4■□□□□ 0.54
SRPRA-206ENST00000532259 SIK1P57059 783 aa18.4■□□□□ 0.54
SRPRA-206ENST00000532259 TRIM28Q13263 835 aaKnown RBP18.4■□□□□ 0.54
SRPRA-206ENST00000532259 PKP1Q13835 747 aa18.4■□□□□ 0.54
SRPRA-206ENST00000532259 BARGINQ6ZT62 677 aa18.4■□□□□ 0.54
SRPRA-206ENST00000532259 BCL9LQ86UU0 1499 aa18.4■□□□□ 0.54
SRPRA-206ENST00000532259 PCCAP05165 728 aaPredicted RBP18.39■□□□□ 0.53
SRPRA-206ENST00000532259 CRKLP46109 303 aaKnown RBP18.39■□□□□ 0.53
SRPRA-206ENST00000532259 ZBTB38Q8NAP3 1195 aaPredicted RBP18.39■□□□□ 0.53
SRPRA-206ENST00000532259 UBN2Q6ZU65 1347 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms