RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 U2SURPO15042 1029 aaKnown RBP7.14□□□□□ -1.27
PCF11-205ENST00000530906 LTKP29376 864 aa7.14□□□□□ -1.27
PCF11-205ENST00000530906 RARSP54136 660 aaKnown RBP7.14□□□□□ -1.27
PCF11-205ENST00000530906 OVOS2Q6IE36 1432 aa7.14□□□□□ -1.27
PCF11-205ENST00000530906 USP31Q70CQ4 1352 aa7.14□□□□□ -1.27
PCF11-205ENST00000530906 KDM2BQ8NHM5 1336 aa7.14□□□□□ -1.27
PCF11-205ENST00000530906 ZFP42Q96MM3 310 aa7.14□□□□□ -1.27
PCF11-205ENST00000530906 KLF16Q9BXK1 252 aaPredicted RBP7.14□□□□□ -1.27
PCF11-205ENST00000530906 ADAMTSL3P82987 1691 aa7.13□□□□□ -1.27
PCF11-205ENST00000530906 SSH2Q76I76 1423 aa7.13□□□□□ -1.27
PCF11-205ENST00000530906 PTPRUQ92729 1446 aa7.13□□□□□ -1.27
PCF11-205ENST00000530906 TTC21BQ7Z4L5 1316 aa7.13□□□□□ -1.27
PCF11-205ENST00000530906 KIF16BQ96L93 1317 aa7.13□□□□□ -1.27
PCF11-205ENST00000530906 SENP3-EIF4A1A0A087X0R7 540 aa7.13□□□□□ -1.27
PCF11-205ENST00000530906 F12P00748 615 aaPredicted RBP7.13□□□□□ -1.27
PCF11-205ENST00000530906 CANXP27824 592 aaKnown RBP7.13□□□□□ -1.27
PCF11-205ENST00000530906 BRPF1P55201 1214 aaPredicted RBP7.13□□□□□ -1.27
PCF11-205ENST00000530906 NNTQ13423 1086 aa7.13□□□□□ -1.27
PCF11-205ENST00000530906 DIXDC1Q155Q3 683 aa7.13□□□□□ -1.27
PCF11-205ENST00000530906 NPAS3Q8IXF0 933 aa7.13□□□□□ -1.27
PCF11-205ENST00000530906 CHMP4BQ9H444 224 aaKnown RBP7.13□□□□□ -1.27
PCF11-205ENST00000530906 FMN2Q9NZ56 1722 aa7.13□□□□□ -1.27
PCF11-205ENST00000530906 PRR36Q9H6K5 1346 aa7.12□□□□□ -1.27
PCF11-205ENST00000530906 PLIN1O60240 522 aa7.12□□□□□ -1.27
PCF11-205ENST00000530906 TIMP2P16035 220 aa7.12□□□□□ -1.27
PCF11-205ENST00000530906 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
PCF11-205ENST00000530906 ANP32AP39687 249 aaKnown RBP7.12□□□□□ -1.27
PCF11-205ENST00000530906 ALDH1L2Q3SY69 923 aa7.12□□□□□ -1.27
PCF11-205ENST00000530906 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.12□□□□□ -1.27
PCF11-205ENST00000530906 PMFBP1Q8TBY8 1022 aa7.12□□□□□ -1.27
PCF11-205ENST00000530906 SLC16A10Q8TF71 515 aa7.12□□□□□ -1.27
PCF11-205ENST00000530906 CDK15Q96Q40 435 aa7.12□□□□□ -1.27
PCF11-205ENST00000530906 RSPH6AQ9H0K4 717 aa7.12□□□□□ -1.27
PCF11-205ENST00000530906 MAP10Q9P2G4 905 aa7.12□□□□□ -1.27
PCF11-205ENST00000530906 AMOTL2Q9Y2J4 779 aa7.12□□□□□ -1.27
PCF11-205ENST00000530906 CHD2O14647 1828 aaKnown RBP7.11□□□□□ -1.27
PCF11-205ENST00000530906 H3BM21 787 aa7.11□□□□□ -1.27
PCF11-205ENST00000530906 IPO8O15397 1037 aaKnown RBP7.11□□□□□ -1.27
PCF11-205ENST00000530906 CTHP32929 405 aa7.11□□□□□ -1.27
PCF11-205ENST00000530906 IL13P35225 146 aa7.11□□□□□ -1.27
PCF11-205ENST00000530906 GMPRP36959 345 aa7.11□□□□□ -1.27
PCF11-205ENST00000530906 NFE2L2Q16236 605 aa7.11□□□□□ -1.27
PCF11-205ENST00000530906 PRPF38BQ5VTL8 546 aaKnown RBP7.11□□□□□ -1.27
PCF11-205ENST00000530906 RIC3Q7Z5B4 369 aa7.11□□□□□ -1.27
PCF11-205ENST00000530906 FOXJ1Q92949 421 aa7.11□□□□□ -1.27
PCF11-205ENST00000530906 CLUAP1Q96AJ1 413 aa7.11□□□□□ -1.27
PCF11-205ENST00000530906 ZBTB3Q9H5J0 574 aa7.11□□□□□ -1.27
PCF11-205ENST00000530906 RGPD1P0DJD0 1748 aa7.1□□□□□ -1.27
PCF11-205ENST00000530906 ACEP12821 1306 aa7.1□□□□□ -1.27
PCF11-205ENST00000530906 BCAR3O75815 825 aa7.1□□□□□ -1.27
PCF11-205ENST00000530906 ADH1CP00326 375 aa7.1□□□□□ -1.27
PCF11-205ENST00000530906 PRKAR2BP31323 418 aa7.1□□□□□ -1.27
PCF11-205ENST00000530906 VEGFBP49765 207 aa7.1□□□□□ -1.27
PCF11-205ENST00000530906 RIPK4P57078 832 aa7.1□□□□□ -1.27
PCF11-205ENST00000530906 GNAI1P63096 354 aa7.1□□□□□ -1.27
PCF11-205ENST00000530906 NEUROD2Q15784 382 aa7.1□□□□□ -1.27
PCF11-205ENST00000530906 C20orf194Q5TEA3 1177 aa7.1□□□□□ -1.27
PCF11-205ENST00000530906 ZKSCAN2Q63HK3 967 aa7.1□□□□□ -1.27
PCF11-205ENST00000530906 MRPL14Q6P1L8 145 aaKnown RBP7.1□□□□□ -1.27
PCF11-205ENST00000530906 ANKLE2Q86XL3 938 aa7.1□□□□□ -1.27
PCF11-205ENST00000530906 NME9Q86XW9 330 aa7.1□□□□□ -1.27
PCF11-205ENST00000530906 FAM174AQ8TBP5 190 aa7.1□□□□□ -1.27
PCF11-205ENST00000530906 CABLES1Q8TDN4 633 aa7.1□□□□□ -1.27
PCF11-205ENST00000530906 IFT57Q9NWB7 429 aa7.1□□□□□ -1.27
PCF11-205ENST00000530906 RRP7AQ9Y3A4 280 aaKnown RBP7.1□□□□□ -1.27
PCF11-205ENST00000530906 ARHGEF10O15013 1369 aa7.09□□□□□ -1.27
PCF11-205ENST00000530906 ERBB4Q15303 1308 aa7.09□□□□□ -1.27
PCF11-205ENST00000530906 CEBPAP49715 358 aaPredicted RBP7.09□□□□□ -1.27
PCF11-205ENST00000530906 WDR4P57081 412 aaKnown RBP7.09□□□□□ -1.27
PCF11-205ENST00000530906 C4orf48Q5BLP8 95 aa7.09□□□□□ -1.27
PCF11-205ENST00000530906 ARHGAP45Q92619 1136 aa7.09□□□□□ -1.27
PCF11-205ENST00000530906 IRF7Q92985 503 aa7.09□□□□□ -1.27
PCF11-205ENST00000530906 AK7Q96M32 723 aa7.09□□□□□ -1.27
PCF11-205ENST00000530906 ANP32EQ9BTT0 268 aa7.09□□□□□ -1.27
PCF11-205ENST00000530906 BACH2Q9BYV9 841 aa7.09□□□□□ -1.27
PCF11-205ENST00000530906 SBNO1A3KN83 1393 aa7.08□□□□□ -1.28
PCF11-205ENST00000530906 RTL1A6NKG5 1358 aa7.08□□□□□ -1.28
PCF11-205ENST00000530906 FLT4P35916 1363 aa7.08□□□□□ -1.28
PCF11-205ENST00000530906 VIRMAQ69YN4 1812 aaKnown RBP7.08□□□□□ -1.28
PCF11-205ENST00000530906 MVPQ14764 893 aaKnown RBP7.08□□□□□ -1.28
PCF11-205ENST00000530906 DZIP1LQ8IYY4 767 aaKnown RBP7.08□□□□□ -1.28
PCF11-205ENST00000530906 SLC26A8Q96RN1 970 aa7.08□□□□□ -1.28
PCF11-205ENST00000530906 DDX19BQ9UMR2 479 aa7.08□□□□□ -1.28
PCF11-205ENST00000530906 EMILIN1Q9Y6C2 1016 aa7.08□□□□□ -1.28
PCF11-205ENST00000530906 ADGRL3Q9HAR2 1447 aa7.08□□□□□ -1.28
PCF11-205ENST00000530906 NWD1Q149M9 1564 aa7.08□□□□□ -1.28
PCF11-205ENST00000530906 DLG5Q8TDM6 1919 aa7.07□□□□□ -1.28
PCF11-205ENST00000530906 PIK3C2AO00443 1686 aa7.07□□□□□ -1.28
PCF11-205ENST00000530906 ZNF853P0CG23 659 aa7.07□□□□□ -1.28
PCF11-205ENST00000530906 GRM5P41594 1212 aa7.07□□□□□ -1.28
PCF11-205ENST00000530906 SCARF1Q14162 830 aa7.07□□□□□ -1.28
PCF11-205ENST00000530906 QPCTQ16769 361 aa7.07□□□□□ -1.28
PCF11-205ENST00000530906 MYSM1Q5VVJ2 828 aa7.07□□□□□ -1.28
PCF11-205ENST00000530906 ATF7IPQ6VMQ6 1270 aa7.07□□□□□ -1.28
PCF11-205ENST00000530906 ERICH6Q7L0X2 663 aa7.07□□□□□ -1.28
PCF11-205ENST00000530906 FTSJ3Q8IY81 847 aaKnown RBP7.07□□□□□ -1.28
PCF11-205ENST00000530906 DDRGK1Q96HY6 314 aa7.07□□□□□ -1.28
PCF11-205ENST00000530906 IPO9Q96P70 1041 aaKnown RBP7.07□□□□□ -1.28
PCF11-205ENST00000530906 PURBQ96QR8 312 aaKnown RBP7.07□□□□□ -1.28
PCF11-205ENST00000530906 RWDD1Q9H446 243 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms