RNA–Protein interactions for RNA: ENST00000530075.1

GMDS-206, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-206ENST00000530075 ATXN7L1Q9ULK2 861 aaPredicted RBP9.5□□□□□ -0.89
GMDS-206ENST00000530075 SOWAHDA6NJG2 315 aa9.49□□□□□ -0.89
GMDS-206ENST00000530075 GMPRP36959 345 aa9.49□□□□□ -0.89
GMDS-206ENST00000530075 ZAP70P43403 619 aa9.49□□□□□ -0.89
GMDS-206ENST00000530075 EIF1AXP47813 144 aaKnown RBP9.49□□□□□ -0.89
GMDS-206ENST00000530075 SF3B2Q13435 895 aaKnown RBP9.49□□□□□ -0.89
GMDS-206ENST00000530075 C2CD2LO14523 706 aa9.48□□□□□ -0.89
GMDS-206ENST00000530075 FGFR3P22607 806 aa9.48□□□□□ -0.89
GMDS-206ENST00000530075 NOM1Q5C9Z4 860 aaKnown RBP9.48□□□□□ -0.89
GMDS-206ENST00000530075 FAM13AO94988 1023 aa9.47□□□□□ -0.89
GMDS-206ENST00000530075 ARSDP51689 593 aa9.47□□□□□ -0.89
GMDS-206ENST00000530075 GLYCTKQ8IVS8 523 aa9.47□□□□□ -0.89
GMDS-206ENST00000530075 RGL4Q8IZJ4 473 aa9.47□□□□□ -0.89
GMDS-206ENST00000530075 ABTB2Q8N961 1025 aa9.47□□□□□ -0.89
GMDS-206ENST00000530075 CNTNAP3BQ96NU0 1288 aa9.47□□□□□ -0.89
GMDS-206ENST00000530075 CNTNAP3Q9BZ76 1288 aa9.47□□□□□ -0.89
GMDS-206ENST00000530075 PHF24Q9UPV7 400 aa9.47□□□□□ -0.89
GMDS-206ENST00000530075 KCNQ4P56696 695 aa9.46□□□□□ -0.9
GMDS-206ENST00000530075 ARHGAP4P98171 946 aa9.46□□□□□ -0.9
GMDS-206ENST00000530075 GPR152Q8TDT2 470 aa9.46□□□□□ -0.9
GMDS-206ENST00000530075 MARK1Q9P0L2 795 aa9.46□□□□□ -0.9
GMDS-206ENST00000530075 KCNH4Q9UQ05 1017 aa9.46□□□□□ -0.9
GMDS-206ENST00000530075 RTCBQ9Y3I0 505 aaKnown RBP9.46□□□□□ -0.9
GMDS-206ENST00000530075 MX2P20592 715 aa9.45□□□□□ -0.9
GMDS-206ENST00000530075 SLC30A3Q99726 388 aa9.45□□□□□ -0.9
GMDS-206ENST00000530075 CCDC87Q9NVE4 849 aa9.45□□□□□ -0.9
GMDS-206ENST00000530075 KCNMB2Q9Y691 235 aa9.45□□□□□ -0.9
GMDS-206ENST00000530075 FZD6O60353 706 aa9.44□□□□□ -0.9
GMDS-206ENST00000530075 LAMC2Q13753 1193 aa9.44□□□□□ -0.9
GMDS-206ENST00000530075 CMTR1Q8N1G2 835 aaKnown RBP9.44□□□□□ -0.9
GMDS-206ENST00000530075 MBIPQ9NS73 344 aa9.44□□□□□ -0.9
GMDS-206ENST00000530075 PATL2C9JE40 543 aaKnown RBP9.43□□□□□ -0.9
GMDS-206ENST00000530075 DNM1Q05193 864 aaKnown RBP9.43□□□□□ -0.9
GMDS-206ENST00000530075 FAM182BQ5T319 152 aa9.43□□□□□ -0.9
GMDS-206ENST00000530075 RAB44Q7Z6P3 723 aaPredicted RBP9.43□□□□□ -0.9
GMDS-206ENST00000530075 EDEM1Q92611 657 aa9.43□□□□□ -0.9
GMDS-206ENST00000530075 BMP4P12644 408 aa9.42□□□□□ -0.9
GMDS-206ENST00000530075 SPEM2Q0P670 501 aa9.42□□□□□ -0.9
GMDS-206ENST00000530075 TRIM26Q12899 539 aaPredicted RBP9.42□□□□□ -0.9
GMDS-206ENST00000530075 AAMPQ13685 434 aa9.42□□□□□ -0.9
GMDS-206ENST00000530075 TRIP4Q15650 581 aaPredicted RBP9.42□□□□□ -0.9
GMDS-206ENST00000530075 NUDT16Q96DE0 195 aaKnown RBP9.42□□□□□ -0.9
GMDS-206ENST00000530075 GSX2Q9BZM3 304 aa9.42□□□□□ -0.9
GMDS-206ENST00000530075 GZF1Q9H116 711 aaPredicted RBP9.42□□□□□ -0.9
GMDS-206ENST00000530075 BIN2Q9UBW5 565 aaPredicted RBP9.42□□□□□ -0.9
GMDS-206ENST00000530075 POLIQ9UNA4 740 aa9.42□□□□□ -0.9
GMDS-206ENST00000530075 IGF1RP08069 1367 aa9.41□□□□□ -0.9
GMDS-206ENST00000530075 PDGFAP04085 211 aa9.41□□□□□ -0.9
GMDS-206ENST00000530075 ALKBH2Q6NS38 261 aa9.41□□□□□ -0.9
GMDS-206ENST00000530075 PIK3R5Q8WYR1 880 aa9.41□□□□□ -0.9
GMDS-206ENST00000530075 KLF15Q9UIH9 416 aa9.41□□□□□ -0.9
GMDS-206ENST00000530075 A6NHS1 94 aa9.4□□□□□ -0.9
GMDS-206ENST00000530075 EPB42P16452 691 aa9.4□□□□□ -0.9
GMDS-206ENST00000530075 GGNBP2Q9H3C7 697 aa9.4□□□□□ -0.9
GMDS-206ENST00000530075 XYLBO75191 536 aa9.39□□□□□ -0.91
GMDS-206ENST00000530075 SASH3O75995 380 aa9.39□□□□□ -0.91
GMDS-206ENST00000530075 ADAMTS2O95450 1211 aa9.39□□□□□ -0.91
GMDS-206ENST00000530075 TARSP26639 723 aaKnown RBP9.39□□□□□ -0.91
GMDS-206ENST00000530075 MZF1P28698 734 aaPredicted RBP9.39□□□□□ -0.91
GMDS-206ENST00000530075 SRSF11Q05519 484 aaKnown RBP9.39□□□□□ -0.91
GMDS-206ENST00000530075 CCINQ13939 588 aa9.39□□□□□ -0.91
GMDS-206ENST00000530075 KRT25Q7Z3Z0 450 aa9.39□□□□□ -0.91
GMDS-206ENST00000530075 ZFATQ9P243 1243 aa9.39□□□□□ -0.91
GMDS-206ENST00000530075 EGFRP00533 1210 aa9.38□□□□□ -0.91
GMDS-206ENST00000530075 PCBP4P57723 403 aaKnown RBP9.38□□□□□ -0.91
GMDS-206ENST00000530075 BHMTQ93088 406 aa9.38□□□□□ -0.91
GMDS-206ENST00000530075 FAM13BQ9NYF5 915 aa9.38□□□□□ -0.91
GMDS-206ENST00000530075 UBAP1LF5GYI3 381 aa9.37□□□□□ -0.91
GMDS-206ENST00000530075 SND1Q7KZF4 910 aaKnown RBP eCLIP9.37□□□□□ -0.91
GMDS-206ENST00000530075 PRR12Q9ULL5 1215 aa9.37□□□□□ -0.91
GMDS-206ENST00000530075 SLURP2P0DP57 97 aa9.36□□□□□ -0.91
GMDS-206ENST00000530075 MAP2K3P46734 347 aa9.36□□□□□ -0.91
GMDS-206ENST00000530075 ZNF468Q5VIY5 522 aaPredicted RBP9.36□□□□□ -0.91
GMDS-206ENST00000530075 SYT9Q86SS6 491 aa9.36□□□□□ -0.91
GMDS-206ENST00000530075 WHAMMQ8TF30 809 aa9.36□□□□□ -0.91
GMDS-206ENST00000530075 ACDQ96AP0 544 aa9.36□□□□□ -0.91
GMDS-206ENST00000530075 BRPF3Q9ULD4 1205 aa9.36□□□□□ -0.91
GMDS-206ENST00000530075 ZBTB7CA1YPR0 619 aa9.35□□□□□ -0.91
GMDS-206ENST00000530075 WIPF1O43516 503 aa9.35□□□□□ -0.91
GMDS-206ENST00000530075 NFKB1P19838 968 aa9.35□□□□□ -0.91
GMDS-206ENST00000530075 C8orf34Q49A92 452 aa9.35□□□□□ -0.91
GMDS-206ENST00000530075 C1orf229Q6ZS94 237 aaPredicted RBP9.35□□□□□ -0.91
GMDS-206ENST00000530075 C11orf16Q9NQ32 467 aa9.35□□□□□ -0.91
GMDS-206ENST00000530075 GGA1Q9UJY5 639 aa9.35□□□□□ -0.91
GMDS-206ENST00000530075 NSFL1CQ9UNZ2 370 aaKnown RBP9.35□□□□□ -0.91
GMDS-206ENST00000530075 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.35□□□□□ -0.91
GMDS-206ENST00000530075 ARAFP10398 606 aa9.34□□□□□ -0.91
GMDS-206ENST00000530075 LORP23490 312 aaPredicted RBP9.34□□□□□ -0.91
GMDS-206ENST00000530075 LYPD4Q6UWN0 246 aa9.34□□□□□ -0.91
GMDS-206ENST00000530075 FCHSD1Q86WN1 690 aa9.34□□□□□ -0.91
GMDS-206ENST00000530075 GJD3Q8N144 294 aa9.34□□□□□ -0.91
GMDS-206ENST00000530075 OXCT2Q9BYC2 517 aaPredicted RBP9.34□□□□□ -0.91
GMDS-206ENST00000530075 NEURL1BA8MQ27 555 aa9.33□□□□□ -0.92
GMDS-206ENST00000530075 PNMA5Q96PV4 448 aa9.33□□□□□ -0.92
GMDS-206ENST00000530075 TMEM63CQ9P1W3 806 aa9.33□□□□□ -0.92
GMDS-206ENST00000530075 NDUFB5O43674 189 aa9.32□□□□□ -0.92
GMDS-206ENST00000530075 IGHA2P01877 340 aa9.32□□□□□ -0.92
GMDS-206ENST00000530075 RARAP10276 462 aa9.32□□□□□ -0.92
GMDS-206ENST00000530075 NLRP13Q86W25 1043 aa9.32□□□□□ -0.92
GMDS-206ENST00000530075 ELP3Q9H9T3 547 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms