RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 USP16Q9Y5T5 823 aa19.12■□□□□ 0.65
TM9SF1-208ENST00000529332 RAB11FIP3O75154 756 aa19.11■□□□□ 0.65
TM9SF1-208ENST00000529332 NBPF7P0C2Y1 421 aaPredicted RBP19.11■□□□□ 0.65
TM9SF1-208ENST00000529332 PROSER3Q2NL68 480 aa19.11■□□□□ 0.65
TM9SF1-208ENST00000529332 VSIG10Q8N0Z9 540 aa19.11■□□□□ 0.65
TM9SF1-208ENST00000529332 RBM27Q9P2N5 1060 aaKnown RBP19.11■□□□□ 0.65
TM9SF1-208ENST00000529332 TRPC5Q9UL62 973 aaPredicted RBP19.11■□□□□ 0.65
TM9SF1-208ENST00000529332 PDIA6Q15084 440 aa19.1■□□□□ 0.65
TM9SF1-208ENST00000529332 NOL8Q76FK4 1167 aaKnown RBP19.1■□□□□ 0.65
TM9SF1-208ENST00000529332 PI4K2BQ8TCG2 481 aa19.1■□□□□ 0.65
TM9SF1-208ENST00000529332 RHPN1Q8TCX5 695 aa19.1■□□□□ 0.65
TM9SF1-208ENST00000529332 TEX13AQ9BXU3 409 aaPredicted RBP19.1■□□□□ 0.65
TM9SF1-208ENST00000529332 BRD1O95696 1058 aa19.1■□□□□ 0.65
TM9SF1-208ENST00000529332 MAP4K4O95819 1239 aaPredicted RBP19.1■□□□□ 0.65
TM9SF1-208ENST00000529332 PRIM1P49642 420 aaKnown RBP19.1■□□□□ 0.65
TM9SF1-208ENST00000529332 BEND3Q5T5X7 828 aa19.1■□□□□ 0.65
TM9SF1-208ENST00000529332 DNAAF4Q8WXU2 420 aa19.1■□□□□ 0.65
TM9SF1-208ENST00000529332 GJD4Q96KN9 370 aaPredicted RBP19.1■□□□□ 0.65
TM9SF1-208ENST00000529332 UPF3BQ9BZI7 483 aaKnown RBP19.1■□□□□ 0.65
TM9SF1-208ENST00000529332 ATG3Q9NT62 314 aa19.1■□□□□ 0.65
TM9SF1-208ENST00000529332 ASAP1Q9ULH1 1129 aa19.1■□□□□ 0.65
TM9SF1-208ENST00000529332 SRGAP3O43295 1099 aa19.09■□□□□ 0.65
TM9SF1-208ENST00000529332 PI4KAP2A4QPH2 592 aa19.09■□□□□ 0.65
TM9SF1-208ENST00000529332 PI4KAP1Q8N8J0 262 aa19.09■□□□□ 0.65
TM9SF1-208ENST00000529332 NSFL1CQ9UNZ2 370 aaKnown RBP19.09■□□□□ 0.65
TM9SF1-208ENST00000529332 ADCY9O60503 1353 aa19.08■□□□□ 0.65
TM9SF1-208ENST00000529332 MYL6BP14649 208 aa19.08■□□□□ 0.64
TM9SF1-208ENST00000529332 KSR2Q6VAB6 950 aa19.08■□□□□ 0.64
TM9SF1-208ENST00000529332 ILDR1Q86SU0 546 aaPredicted RBP19.08■□□□□ 0.64
TM9SF1-208ENST00000529332 INTS4Q96HW7 963 aaKnown RBP19.08■□□□□ 0.64
TM9SF1-208ENST00000529332 RBSNQ9H1K0 784 aa19.08■□□□□ 0.64
TM9SF1-208ENST00000529332 HSPA4P34932 840 aa19.07■□□□□ 0.64
TM9SF1-208ENST00000529332 KIF1BPQ96EK5 621 aa19.07■□□□□ 0.64
TM9SF1-208ENST00000529332 TMEM63CQ9P1W3 806 aa19.07■□□□□ 0.64
TM9SF1-208ENST00000529332 MAP3K2Q9Y2U5 619 aa19.06■□□□□ 0.64
TM9SF1-208ENST00000529332 EPB41L2O43491 1005 aaKnown RBP19.06■□□□□ 0.64
TM9SF1-208ENST00000529332 AIMP1Q12904 312 aaKnown RBP19.05■□□□□ 0.64
TM9SF1-208ENST00000529332 XAGE3Q8WTP9 111 aa19.05■□□□□ 0.64
TM9SF1-208ENST00000529332 ACSBG1Q96GR2 724 aa19.05■□□□□ 0.64
TM9SF1-208ENST00000529332 NAP1L5Q96NT1 182 aaPredicted RBP19.05■□□□□ 0.64
TM9SF1-208ENST00000529332 ARFGEF2Q9Y6D5 1785 aa19.05■□□□□ 0.64
TM9SF1-208ENST00000529332 SGSM2O43147 1006 aa19.04■□□□□ 0.64
TM9SF1-208ENST00000529332 STARD3NLO95772 234 aa19.04■□□□□ 0.64
TM9SF1-208ENST00000529332 COPS6Q7L5N1 327 aa19.04■□□□□ 0.64
TM9SF1-208ENST00000529332 RIC3Q7Z5B4 369 aa19.04■□□□□ 0.64
TM9SF1-208ENST00000529332 ANP32BQ92688 251 aaKnown RBP19.04■□□□□ 0.64
TM9SF1-208ENST00000529332 RAD50Q92878 1312 aa19.04■□□□□ 0.64
TM9SF1-208ENST00000529332 TJP1Q07157 1748 aa19.03■□□□□ 0.64
TM9SF1-208ENST00000529332 ALDH1L1O75891 902 aa19.03■□□□□ 0.64
TM9SF1-208ENST00000529332 LRP10Q7Z4F1 713 aa19.03■□□□□ 0.64
TM9SF1-208ENST00000529332 CICQ96RK0 1608 aaPredicted RBP19.03■□□□□ 0.64
TM9SF1-208ENST00000529332 NEXNQ0ZGT2 675 aa19.03■□□□□ 0.64
TM9SF1-208ENST00000529332 LSG1Q9H089 658 aaKnown RBP19.03■□□□□ 0.64
TM9SF1-208ENST00000529332 QTRT2Q9H974 415 aaKnown RBP19.03■□□□□ 0.64
TM9SF1-208ENST00000529332 NHSQ6T4R5 1651 aa19.02■□□□□ 0.64
TM9SF1-208ENST00000529332 ONECUT3O60422 494 aaPredicted RBP19.02■□□□□ 0.64
TM9SF1-208ENST00000529332 SMARCC1Q92922 1105 aaPredicted RBP19.02■□□□□ 0.64
TM9SF1-208ENST00000529332 SYCE3A1L190 88 aa19.01■□□□□ 0.63
TM9SF1-208ENST00000529332 LRSAM1Q6UWE0 723 aa19.01■□□□□ 0.63
TM9SF1-208ENST00000529332 ANKRD13DQ6ZTN6 518 aa19.01■□□□□ 0.63
TM9SF1-208ENST00000529332 DNAJC10Q8IXB1 793 aa19.01■□□□□ 0.63
TM9SF1-208ENST00000529332 CNTROBQ8N137 903 aa19.01■□□□□ 0.63
TM9SF1-208ENST00000529332 SNX14Q9Y5W7 946 aa19.01■□□□□ 0.63
TM9SF1-208ENST00000529332 USP42Q9H9J4 1324 aaKnown RBP19.01■□□□□ 0.63
TM9SF1-208ENST00000529332 NBPF26B4DH59 902 aa19.01■□□□□ 0.63
TM9SF1-208ENST00000529332 PIP4K2AP48426 406 aaPredicted RBP19.01■□□□□ 0.63
TM9SF1-208ENST00000529332 NBPF14Q5TI25 921 aa19.01■□□□□ 0.63
TM9SF1-208ENST00000529332 NBPF10Q6P3W6 841 aaKnown RBP19.01■□□□□ 0.63
TM9SF1-208ENST00000529332 NBPF15Q8N660 670 aa19.01■□□□□ 0.63
TM9SF1-208ENST00000529332 LINS1Q8NG48 757 aa19.01■□□□□ 0.63
TM9SF1-208ENST00000529332 NUP188Q5SRE5 1749 aa19■□□□□ 0.63
TM9SF1-208ENST00000529332 MBD3O95983 291 aa19■□□□□ 0.63
TM9SF1-208ENST00000529332 A1BGP04217 495 aa19■□□□□ 0.63
TM9SF1-208ENST00000529332 RASEFQ8IZ41 740 aa19■□□□□ 0.63
TM9SF1-208ENST00000529332 HDAC5Q9UQL6 1122 aa19■□□□□ 0.63
TM9SF1-208ENST00000529332 AFDNP55196 1824 aaKnown RBP19■□□□□ 0.63
TM9SF1-208ENST00000529332 ZNF831Q5JPB2 1677 aa19■□□□□ 0.63
TM9SF1-208ENST00000529332 MTX1Q13505 466 aa19■□□□□ 0.63
TM9SF1-208ENST00000529332 HSP90AB4PQ58FF6 505 aa19■□□□□ 0.63
TM9SF1-208ENST00000529332 TTC14Q96N46 770 aa19■□□□□ 0.63
TM9SF1-208ENST00000529332 CWC27Q6UX04 472 aaKnown RBP18.99■□□□□ 0.63
TM9SF1-208ENST00000529332 ZSCAN30Q86W11 494 aa18.99■□□□□ 0.63
TM9SF1-208ENST00000529332 PLBD2Q8NHP8 589 aa18.99■□□□□ 0.63
TM9SF1-208ENST00000529332 PDLIM2Q96JY6 352 aa18.99■□□□□ 0.63
TM9SF1-208ENST00000529332 METTL22Q9BUU2 404 aaPredicted RBP18.98■□□□□ 0.63
TM9SF1-208ENST00000529332 PALLDQ8WX93 1383 aa18.98■□□□□ 0.63
TM9SF1-208ENST00000529332 FOXD4L6Q3SYB3 417 aaPredicted RBP18.98■□□□□ 0.63
TM9SF1-208ENST00000529332 FOXD4L3Q6VB84 417 aaPredicted RBP18.98■□□□□ 0.63
TM9SF1-208ENST00000529332 SEPT12Q8IYM1 358 aa18.98■□□□□ 0.63
TM9SF1-208ENST00000529332 TTC41PQ6P2S7 1318 aa18.98■□□□□ 0.63
TM9SF1-208ENST00000529332 RPAP1Q9BWH6 1393 aaPredicted RBP18.98■□□□□ 0.63
TM9SF1-208ENST00000529332 BTAF1O14981 1849 aa18.98■□□□□ 0.63
TM9SF1-208ENST00000529332 OS9Q13438 667 aaPredicted RBP18.97■□□□□ 0.63
TM9SF1-208ENST00000529332 ZNF772Q68DY9 489 aaPredicted RBP18.97■□□□□ 0.63
TM9SF1-208ENST00000529332 SBF2Q86WG5 1849 aa18.97■□□□□ 0.63
TM9SF1-208ENST00000529332 C9orf78Q9NZ63 289 aaPredicted RBP18.97■□□□□ 0.63
TM9SF1-208ENST00000529332 GLRX3O76003 335 aaKnown RBP18.97■□□□□ 0.63
TM9SF1-208ENST00000529332 CYP19A1P11511 503 aaPredicted RBP18.97■□□□□ 0.63
TM9SF1-208ENST00000529332 SLC4A9Q96Q91 983 aa18.97■□□□□ 0.63
TM9SF1-208ENST00000529332 GDPD2Q9HCC8 539 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms