RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 UBTFL1P0CB47 393 aaPredicted RBP31.08■■■□□ 2.57
LDLRAD3-203ENST00000528989 CHMP4BQ9H444 224 aaKnown RBP31.08■■■□□ 2.57
LDLRAD3-203ENST00000528989 FAM177BA6PVY3 158 aa31.07■■■□□ 2.56
LDLRAD3-203ENST00000528989 UBE3BQ7Z3V4 1068 aa31.07■■■□□ 2.56
LDLRAD3-203ENST00000528989 C4AP0C0L4 1744 aa31.07■■■□□ 2.56
LDLRAD3-203ENST00000528989 GYS1P13807 737 aa31.06■■■□□ 2.56
LDLRAD3-203ENST00000528989 SYNE4Q8N205 404 aa31.06■■■□□ 2.56
LDLRAD3-203ENST00000528989 LRRFIP2Q9Y608 721 aaKnown RBP31.06■■■□□ 2.56
LDLRAD3-203ENST00000528989 SUSD4Q5VX71 490 aa31.05■■■□□ 2.56
LDLRAD3-203ENST00000528989 FAM89AQ96GI7 184 aa31.05■■■□□ 2.56
LDLRAD3-203ENST00000528989 UTYO14607 1347 aa31.05■■■□□ 2.56
LDLRAD3-203ENST00000528989 H7C1W4 665 aa31.04■■■□□ 2.56
LDLRAD3-203ENST00000528989 GNAI2P04899 355 aa31.04■■■□□ 2.56
LDLRAD3-203ENST00000528989 AAMPQ13685 434 aa31.04■■■□□ 2.56
LDLRAD3-203ENST00000528989 BCORQ6W2J9 1755 aa31.04■■■□□ 2.56
LDLRAD3-203ENST00000528989 CASP7P55210 303 aa31.04■■■□□ 2.56
LDLRAD3-203ENST00000528989 PDGFDQ9GZP0 370 aaPredicted RBP31.04■■■□□ 2.56
LDLRAD3-203ENST00000528989 KAZALD1Q96I82 304 aa31.03■■■□□ 2.56
LDLRAD3-203ENST00000528989 SUCLG2Q96I99 432 aa31.03■■■□□ 2.56
LDLRAD3-203ENST00000528989 AFDNP55196 1824 aaKnown RBP31.03■■■□□ 2.56
LDLRAD3-203ENST00000528989 TUBGCP6Q96RT7 1819 aa31.03■■■□□ 2.56
LDLRAD3-203ENST00000528989 CCDC136Q96JN2 1154 aa31.02■■■□□ 2.56
LDLRAD3-203ENST00000528989 SCN7AQ01118 1682 aa31.02■■■□□ 2.56
LDLRAD3-203ENST00000528989 SIRT2Q8IXJ6 389 aa31.01■■■□□ 2.56
LDLRAD3-203ENST00000528989 FLAD1Q8NFF5 587 aa31.01■■■□□ 2.56
LDLRAD3-203ENST00000528989 TRMT112Q9UI30 125 aaKnown RBP31.01■■■□□ 2.56
LDLRAD3-203ENST00000528989 RGL2O15211 777 aa31.01■■■□□ 2.55
LDLRAD3-203ENST00000528989 IBTKQ9P2D0 1353 aaPredicted RBP31■■■□□ 2.55
LDLRAD3-203ENST00000528989 ZBTB38Q8NAP3 1195 aaPredicted RBP31■■■□□ 2.55
LDLRAD3-203ENST00000528989 SETDB2Q96T68 719 aa31■■■□□ 2.55
LDLRAD3-203ENST00000528989 IGHDP01880 384 aa30.99■■■□□ 2.55
LDLRAD3-203ENST00000528989 NFIXQ14938 502 aa30.99■■■□□ 2.55
LDLRAD3-203ENST00000528989 EPHA10Q5JZY3 1008 aa30.99■■■□□ 2.55
LDLRAD3-203ENST00000528989 PCCAP05165 728 aaPredicted RBP30.98■■■□□ 2.55
LDLRAD3-203ENST00000528989 PARP10Q53GL7 1025 aa30.98■■■□□ 2.55
LDLRAD3-203ENST00000528989 CEP85Q6P2H3 762 aa30.98■■■□□ 2.55
LDLRAD3-203ENST00000528989 NUTM1Q86Y26 1132 aa30.97■■■□□ 2.55
LDLRAD3-203ENST00000528989 UTP14AQ9BVJ6 771 aaKnown RBP30.97■■■□□ 2.55
LDLRAD3-203ENST00000528989 ANKRD36CQ5JPF3 1778 aa30.97■■■□□ 2.55
LDLRAD3-203ENST00000528989 BICC1Q9H694 974 aaKnown RBP30.97■■■□□ 2.55
LDLRAD3-203ENST00000528989 NTSR2O95665 410 aa30.96■■■□□ 2.55
LDLRAD3-203ENST00000528989 MSL1Q68DK7 614 aa30.95■■■□□ 2.54
LDLRAD3-203ENST00000528989 PPP1R42Q7Z4L9 355 aa30.95■■■□□ 2.54
LDLRAD3-203ENST00000528989 PNMA6EA0A0J9YXQ4 647 aa30.94■■■□□ 2.54
LDLRAD3-203ENST00000528989 TM4SF1P30408 202 aa30.93■■■□□ 2.54
LDLRAD3-203ENST00000528989 ANKRD44Q8N8A2 993 aa30.93■■■□□ 2.54
LDLRAD3-203ENST00000528989 FOXO4P98177 505 aa30.92■■■□□ 2.54
LDLRAD3-203ENST00000528989 RPAP2Q8IXW5 612 aaPredicted RBP30.92■■■□□ 2.54
LDLRAD3-203ENST00000528989 CCDC24Q8N4L8 307 aa30.92■■■□□ 2.54
LDLRAD3-203ENST00000528989 SH3TC1Q8TE82 1336 aa30.92■■■□□ 2.54
LDLRAD3-203ENST00000528989 IRS4O14654 1257 aaPredicted RBP30.91■■■□□ 2.54
LDLRAD3-203ENST00000528989 HCLS1P14317 486 aaPredicted RBP30.91■■■□□ 2.54
LDLRAD3-203ENST00000528989 NBPF5PQ86XG9 351 aaPredicted RBP30.91■■■□□ 2.54
LDLRAD3-203ENST00000528989 ATP8B2P98198 1209 aa30.91■■■□□ 2.54
LDLRAD3-203ENST00000528989 ERFEQ4G0M1 354 aa30.91■■■□□ 2.54
LDLRAD3-203ENST00000528989 NLGN1Q8N2Q7 840 aa30.91■■■□□ 2.54
LDLRAD3-203ENST00000528989 DDR1Q08345 913 aa30.9■■■□□ 2.54
LDLRAD3-203ENST00000528989 HDAC5Q9UQL6 1122 aa30.89■■■□□ 2.54
LDLRAD3-203ENST00000528989 HDAC1Q13547 482 aaPredicted RBP30.89■■■□□ 2.53
LDLRAD3-203ENST00000528989 SRGAP3O43295 1099 aa30.88■■■□□ 2.53
LDLRAD3-203ENST00000528989 LMBR1LQ6UX01 489 aa30.88■■■□□ 2.53
LDLRAD3-203ENST00000528989 RWDD1Q9H446 243 aaPredicted RBP30.88■■■□□ 2.53
LDLRAD3-203ENST00000528989 CDHR2Q9BYE9 1310 aa30.88■■■□□ 2.53
LDLRAD3-203ENST00000528989 CARMIL3Q8ND23 1372 aa30.88■■■□□ 2.53
LDLRAD3-203ENST00000528989 GTF2E1P29083 439 aaPredicted RBP30.87■■■□□ 2.53
LDLRAD3-203ENST00000528989 R3HDM1Q15032 1099 aaKnown RBP30.87■■■□□ 2.53
LDLRAD3-203ENST00000528989 TPTE2Q6XPS3 522 aa30.87■■■□□ 2.53
LDLRAD3-203ENST00000528989 POLRMTO00411 1230 aaKnown RBP30.87■■■□□ 2.53
LDLRAD3-203ENST00000528989 CCDC85AQ96PX6 553 aaPredicted RBP30.87■■■□□ 2.53
LDLRAD3-203ENST00000528989 SERPINB2P05120 415 aa30.86■■■□□ 2.53
LDLRAD3-203ENST00000528989 RABL6Q3YEC7 729 aaPredicted RBP30.86■■■□□ 2.53
LDLRAD3-203ENST00000528989 KDM2BQ8NHM5 1336 aa30.85■■■□□ 2.53
LDLRAD3-203ENST00000528989 PLA2G12BQ9BX93 195 aa30.85■■■□□ 2.53
LDLRAD3-203ENST00000528989 NYXQ9GZU5 481 aa30.85■■■□□ 2.53
LDLRAD3-203ENST00000528989 MMP10P09238 476 aa30.84■■■□□ 2.53
LDLRAD3-203ENST00000528989 MTX1Q13505 466 aa30.84■■■□□ 2.53
LDLRAD3-203ENST00000528989 CHMP3Q9Y3E7 222 aa30.84■■■□□ 2.53
LDLRAD3-203ENST00000528989 ABCC12Q96J65 1359 aa30.83■■■□□ 2.53
LDLRAD3-203ENST00000528989 NPHP1O15259 732 aa30.83■■■□□ 2.53
LDLRAD3-203ENST00000528989 PDE8AO60658 829 aa30.83■■■□□ 2.53
LDLRAD3-203ENST00000528989 SSH3Q8TE77 659 aa30.83■■■□□ 2.53
LDLRAD3-203ENST00000528989 POLA2Q14181 598 aa30.82■■■□□ 2.53
LDLRAD3-203ENST00000528989 C3orf67Q6ZVT6 689 aa30.82■■■□□ 2.53
LDLRAD3-203ENST00000528989 PSDA5PKW4 1024 aaPredicted RBP30.82■■■□□ 2.52
LDLRAD3-203ENST00000528989 PRR5LQ6MZQ0 368 aa30.82■■■□□ 2.52
LDLRAD3-203ENST00000528989 CNBD1Q8NA66 436 aa30.82■■■□□ 2.52
LDLRAD3-203ENST00000528989 TTLL11Q8NHH1 800 aa30.82■■■□□ 2.52
LDLRAD3-203ENST00000528989 COL24A1Q17RW2 1714 aa30.81■■■□□ 2.52
LDLRAD3-203ENST00000528989 QSER1Q2KHR3 1735 aa30.81■■■□□ 2.52
LDLRAD3-203ENST00000528989 KLHDC4Q8TBB5 520 aa30.81■■■□□ 2.52
LDLRAD3-203ENST00000528989 CSF1RP07333 972 aa30.8■■■□□ 2.52
LDLRAD3-203ENST00000528989 CTSWP56202 376 aa30.8■■■□□ 2.52
LDLRAD3-203ENST00000528989 HMMRO75330 724 aa30.8■■■□□ 2.52
LDLRAD3-203ENST00000528989 SLC10A5Q5PT55 438 aa30.79■■■□□ 2.52
LDLRAD3-203ENST00000528989 PA2G4Q9UQ80 394 aaKnown RBP30.79■■■□□ 2.52
LDLRAD3-203ENST00000528989 FAM161AQ3B820 660 aa30.78■■■□□ 2.52
LDLRAD3-203ENST00000528989 GREM2Q9H772 168 aa30.78■■■□□ 2.52
LDLRAD3-203ENST00000528989 ZBTB7AO95365 584 aa30.78■■■□□ 2.52
LDLRAD3-203ENST00000528989 CENPQQ7L2Z9 268 aaPredicted RBP30.78■■■□□ 2.52
LDLRAD3-203ENST00000528989 DCTPP1Q9H773 170 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms