RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 SF3B2Q13435 895 aaKnown RBP10.58□□□□□ -0.72
PCF11-202ENST00000528336 AAMPQ13685 434 aa10.58□□□□□ -0.72
PCF11-202ENST00000528336 GRIN2CQ14957 1233 aa10.58□□□□□ -0.72
PCF11-202ENST00000528336 GLYCTKQ8IVS8 523 aa10.58□□□□□ -0.72
PCF11-202ENST00000528336 MARK1Q9P0L2 795 aa10.58□□□□□ -0.72
PCF11-202ENST00000528336 EGFL7Q9UHF1 273 aa10.58□□□□□ -0.72
PCF11-202ENST00000528336 ZAP70P43403 619 aa10.57□□□□□ -0.72
PCF11-202ENST00000528336 ARSDP51689 593 aa10.57□□□□□ -0.72
PCF11-202ENST00000528336 KRT76Q01546 638 aa10.57□□□□□ -0.72
PCF11-202ENST00000528336 NOM1Q5C9Z4 860 aaKnown RBP10.57□□□□□ -0.72
PCF11-202ENST00000528336 ATCAYQ86WG3 371 aa10.57□□□□□ -0.72
PCF11-202ENST00000528336 RGL4Q8IZJ4 473 aa10.57□□□□□ -0.72
PCF11-202ENST00000528336 KCNH4Q9UQ05 1017 aa10.57□□□□□ -0.72
PCF11-202ENST00000528336 FAM13AO94988 1023 aa10.56□□□□□ -0.72
PCF11-202ENST00000528336 CMTR1Q8N1G2 835 aaKnown RBP10.56□□□□□ -0.72
PCF11-202ENST00000528336 PATL2C9JE40 543 aaKnown RBP10.55□□□□□ -0.72
PCF11-202ENST00000528336 C2CD2LO14523 706 aa10.55□□□□□ -0.72
PCF11-202ENST00000528336 BMP4P12644 408 aa10.55□□□□□ -0.72
PCF11-202ENST00000528336 EIF1AXP47813 144 aaKnown RBP10.55□□□□□ -0.72
PCF11-202ENST00000528336 LAMC2Q13753 1193 aa10.55□□□□□ -0.72
PCF11-202ENST00000528336 GPR152Q8TDT2 470 aa10.55□□□□□ -0.72
PCF11-202ENST00000528336 MBIPQ9NS73 344 aa10.55□□□□□ -0.72
PCF11-202ENST00000528336 RTCBQ9Y3I0 505 aaKnown RBP10.55□□□□□ -0.72
PCF11-202ENST00000528336 EPB42P16452 691 aa10.54□□□□□ -0.72
PCF11-202ENST00000528336 LCE2AQ5TA79 106 aaPredicted RBP10.54□□□□□ -0.72
PCF11-202ENST00000528336 PRR12Q9ULL5 1215 aa10.54□□□□□ -0.72
PCF11-202ENST00000528336 SOWAHDA6NJG2 315 aa10.53□□□□□ -0.72
PCF11-202ENST00000528336 NPR3P17342 541 aa10.53□□□□□ -0.72
PCF11-202ENST00000528336 GRNP28799 593 aaKnown RBP10.53□□□□□ -0.72
PCF11-202ENST00000528336 ALKBH2Q6NS38 261 aa10.53□□□□□ -0.72
PCF11-202ENST00000528336 BIN2Q9UBW5 565 aaPredicted RBP10.53□□□□□ -0.72
PCF11-202ENST00000528336 NSFL1CQ9UNZ2 370 aaKnown RBP10.53□□□□□ -0.72
PCF11-202ENST00000528336 KCNQ4P56696 695 aa10.52□□□□□ -0.73
PCF11-202ENST00000528336 DNM1Q05193 864 aaKnown RBP10.52□□□□□ -0.73
PCF11-202ENST00000528336 SPEM2Q0P670 501 aa10.52□□□□□ -0.73
PCF11-202ENST00000528336 PIK3R5Q8WYR1 880 aa10.52□□□□□ -0.73
PCF11-202ENST00000528336 EDEM1Q92611 657 aa10.52□□□□□ -0.73
PCF11-202ENST00000528336 SLC30A3Q99726 388 aa10.52□□□□□ -0.73
PCF11-202ENST00000528336 IGF1RP08069 1367 aa10.52□□□□□ -0.73
PCF11-202ENST00000528336 RAB44Q7Z6P3 723 aaPredicted RBP10.51□□□□□ -0.73
PCF11-202ENST00000528336 FAM13BQ9NYF5 915 aa10.51□□□□□ -0.73
PCF11-202ENST00000528336 ECM1Q16610 540 aa10.5□□□□□ -0.73
PCF11-202ENST00000528336 FAM182BQ5T319 152 aa10.5□□□□□ -0.73
PCF11-202ENST00000528336 ADAMTS2O95450 1211 aa10.49□□□□□ -0.73
PCF11-202ENST00000528336 SRSF11Q05519 484 aaKnown RBP10.49□□□□□ -0.73
PCF11-202ENST00000528336 KRT25Q7Z3Z0 450 aa10.49□□□□□ -0.73
PCF11-202ENST00000528336 NUDT16Q96DE0 195 aaKnown RBP10.49□□□□□ -0.73
PCF11-202ENST00000528336 CCDC87Q9NVE4 849 aa10.49□□□□□ -0.73
PCF11-202ENST00000528336 XYLBO75191 536 aa10.48□□□□□ -0.73
PCF11-202ENST00000528336 MAP2K3P46734 347 aa10.48□□□□□ -0.73
PCF11-202ENST00000528336 ARHGAP4P98171 946 aa10.48□□□□□ -0.73
PCF11-202ENST00000528336 CCINQ13939 588 aa10.48□□□□□ -0.73
PCF11-202ENST00000528336 BHMTQ93088 406 aa10.48□□□□□ -0.73
PCF11-202ENST00000528336 PNMA5Q96PV4 448 aa10.48□□□□□ -0.73
PCF11-202ENST00000528336 GSX2Q9BZM3 304 aa10.48□□□□□ -0.73
PCF11-202ENST00000528336 POLIQ9UNA4 740 aa10.48□□□□□ -0.73
PCF11-202ENST00000528336 KCNMB2Q9Y691 235 aa10.48□□□□□ -0.73
PCF11-202ENST00000528336 UBAP1LF5GYI3 381 aa10.47□□□□□ -0.73
PCF11-202ENST00000528336 FZD6O60353 706 aa10.47□□□□□ -0.73
PCF11-202ENST00000528336 SASH3O75995 380 aa10.47□□□□□ -0.73
PCF11-202ENST00000528336 PDGFAP04085 211 aa10.47□□□□□ -0.73
PCF11-202ENST00000528336 PCSK2P16519 638 aa10.47□□□□□ -0.73
PCF11-202ENST00000528336 PCBP4P57723 403 aaKnown RBP10.47□□□□□ -0.73
PCF11-202ENST00000528336 GZF1Q9H116 711 aaPredicted RBP10.47□□□□□ -0.73
PCF11-202ENST00000528336 ZBTB7CA1YPR0 619 aa10.46□□□□□ -0.73
PCF11-202ENST00000528336 TARSP26639 723 aaKnown RBP10.46□□□□□ -0.73
PCF11-202ENST00000528336 MZF1P28698 734 aaPredicted RBP10.46□□□□□ -0.73
PCF11-202ENST00000528336 TRIP4Q15650 581 aaPredicted RBP10.46□□□□□ -0.73
PCF11-202ENST00000528336 TTC16Q8NEE8 873 aa10.46□□□□□ -0.73
PCF11-202ENST00000528336 BRPF3Q9ULD4 1205 aa10.46□□□□□ -0.73
PCF11-202ENST00000528336 NEUROD1Q13562 356 aa10.45□□□□□ -0.74
PCF11-202ENST00000528336 C8orf34Q49A92 452 aa10.45□□□□□ -0.74
PCF11-202ENST00000528336 SYT9Q86SS6 491 aa10.45□□□□□ -0.74
PCF11-202ENST00000528336 FNDC3AQ9Y2H6 1198 aaKnown RBP10.45□□□□□ -0.74
PCF11-202ENST00000528336 NEURL1BA8MQ27 555 aa10.44□□□□□ -0.74
PCF11-202ENST00000528336 NFKB1P19838 968 aa10.44□□□□□ -0.74
PCF11-202ENST00000528336 ZNF468Q5VIY5 522 aaPredicted RBP10.44□□□□□ -0.74
PCF11-202ENST00000528336 ACDQ96AP0 544 aa10.44□□□□□ -0.74
PCF11-202ENST00000528336 OXCT2Q9BYC2 517 aaPredicted RBP10.44□□□□□ -0.74
PCF11-202ENST00000528336 GGNBP2Q9H3C7 697 aa10.44□□□□□ -0.74
PCF11-202ENST00000528336 IGFLR1Q9H665 355 aa10.44□□□□□ -0.74
PCF11-202ENST00000528336 GGA1Q9UJY5 639 aa10.44□□□□□ -0.74
PCF11-202ENST00000528336 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.44□□□□□ -0.74
PCF11-202ENST00000528336 A6NHS1 94 aa10.43□□□□□ -0.74
PCF11-202ENST00000528336 ARAFP10398 606 aa10.43□□□□□ -0.74
PCF11-202ENST00000528336 KLF15Q9UIH9 416 aa10.43□□□□□ -0.74
PCF11-202ENST00000528336 WIPF1O43516 503 aa10.42□□□□□ -0.74
PCF11-202ENST00000528336 NDUFB5O43674 189 aa10.42□□□□□ -0.74
PCF11-202ENST00000528336 EGFRP00533 1210 aa10.42□□□□□ -0.74
PCF11-202ENST00000528336 SLURP2P0DP57 97 aa10.42□□□□□ -0.74
PCF11-202ENST00000528336 RARAP10276 462 aa10.42□□□□□ -0.74
PCF11-202ENST00000528336 TBC1D8BQ0IIM8 1120 aa10.42□□□□□ -0.74
PCF11-202ENST00000528336 WHAMMQ8TF30 809 aa10.42□□□□□ -0.74
PCF11-202ENST00000528336 C11orf16Q9NQ32 467 aa10.42□□□□□ -0.74
PCF11-202ENST00000528336 ZFATQ9P243 1243 aa10.42□□□□□ -0.74
PCF11-202ENST00000528336 RPLP1P05386 114 aaKnown RBP10.41□□□□□ -0.74
PCF11-202ENST00000528336 ADH6P28332 368 aa10.41□□□□□ -0.74
PCF11-202ENST00000528336 NLRP13Q86W25 1043 aa10.41□□□□□ -0.74
PCF11-202ENST00000528336 TMC1Q8TDI8 760 aa10.41□□□□□ -0.74
PCF11-202ENST00000528336 USP5P45974 858 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms