RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 HTATSF1O43719 755 aaKnown RBP17.31■□□□□ 0.36
CAPN1-214ENST00000528165 KMT5BQ4FZB7 885 aa17.31■□□□□ 0.36
CAPN1-214ENST00000528165 RBM8AQ9Y5S9 174 aaKnown RBP17.31■□□□□ 0.36
CAPN1-214ENST00000528165 CREB3L3Q68CJ9 461 aa17.31■□□□□ 0.36
CAPN1-214ENST00000528165 CLASRPQ8N2M8 674 aaKnown RBP17.31■□□□□ 0.36
CAPN1-214ENST00000528165 PHAXQ9H814 394 aaKnown RBP17.31■□□□□ 0.36
CAPN1-214ENST00000528165 RIMS1Q86UR5 1692 aaKnown RBP17.31■□□□□ 0.36
CAPN1-214ENST00000528165 ANKRD1Q15327 319 aa17.3■□□□□ 0.36
CAPN1-214ENST00000528165 HDGFL1Q5TGJ6 251 aa17.3■□□□□ 0.36
CAPN1-214ENST00000528165 GPATCH3Q96I76 525 aa17.3■□□□□ 0.36
CAPN1-214ENST00000528165 LARP1Q6PKG0 1096 aaKnown RBP17.3■□□□□ 0.36
CAPN1-214ENST00000528165 ECHDC1Q9NTX5 307 aa17.3■□□□□ 0.36
CAPN1-214ENST00000528165 CACNA1FO60840 1977 aa17.3■□□□□ 0.36
CAPN1-214ENST00000528165 ACEP12821 1306 aa17.3■□□□□ 0.36
CAPN1-214ENST00000528165 N4BP2Q86UW6 1770 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-214ENST00000528165 GNAT3A8MTJ3 354 aa17.29■□□□□ 0.36
CAPN1-214ENST00000528165 NBPF7P0C2Y1 421 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-214ENST00000528165 RBM6P78332 1123 aaKnown RBP17.29■□□□□ 0.36
CAPN1-214ENST00000528165 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.29■□□□□ 0.36
CAPN1-214ENST00000528165 V9GYY5 206 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-214ENST00000528165 KDRP35968 1356 aa17.29■□□□□ 0.36
CAPN1-214ENST00000528165 ADGRL3Q9HAR2 1447 aa17.29■□□□□ 0.36
CAPN1-214ENST00000528165 USP27XA6NNY8 438 aa17.29■□□□□ 0.36
CAPN1-214ENST00000528165 SKILP12757 684 aa17.29■□□□□ 0.36
CAPN1-214ENST00000528165 ERO1AQ96HE7 468 aa17.29■□□□□ 0.36
CAPN1-214ENST00000528165 CRYBG1Q9Y4K1 1723 aa17.29■□□□□ 0.36
CAPN1-214ENST00000528165 SARM1Q6SZW1 724 aa17.29■□□□□ 0.36
CAPN1-214ENST00000528165 MRFAP1L1Q96HT8 127 aa17.29■□□□□ 0.36
CAPN1-214ENST00000528165 GTF2E1P29083 439 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-214ENST00000528165 BLOC1S2Q6QNY1 142 aa17.28■□□□□ 0.36
CAPN1-214ENST00000528165 NYAP1Q6ZVC0 841 aa17.28■□□□□ 0.36
CAPN1-214ENST00000528165 EVI5LQ96CN4 794 aa17.28■□□□□ 0.36
CAPN1-214ENST00000528165 ARID5BQ14865 1188 aa17.28■□□□□ 0.36
CAPN1-214ENST00000528165 PGBD1Q96JS3 809 aa17.28■□□□□ 0.36
CAPN1-214ENST00000528165 EYA1Q99502 592 aa17.28■□□□□ 0.36
CAPN1-214ENST00000528165 USP31Q70CQ4 1352 aa17.28■□□□□ 0.36
CAPN1-214ENST00000528165 IFIT2P09913 472 aaKnown RBP17.27■□□□□ 0.36
CAPN1-214ENST00000528165 ELF2Q15723 593 aa17.27■□□□□ 0.36
CAPN1-214ENST00000528165 FBXO38Q6PIJ6 1188 aa17.27■□□□□ 0.36
CAPN1-214ENST00000528165 SIRT1Q96EB6 747 aa17.27■□□□□ 0.36
CAPN1-214ENST00000528165 TMEM51Q9NW97 253 aa17.27■□□□□ 0.36
CAPN1-214ENST00000528165 SLC27A2O14975 620 aa17.27■□□□□ 0.35
CAPN1-214ENST00000528165 RNF20Q5VTR2 975 aa17.27■□□□□ 0.35
CAPN1-214ENST00000528165 MAP4K1Q92918 833 aa17.27■□□□□ 0.35
CAPN1-214ENST00000528165 TCEANC2Q96MN5 208 aa17.27■□□□□ 0.35
CAPN1-214ENST00000528165 FLT4P35916 1363 aa17.27■□□□□ 0.35
CAPN1-214ENST00000528165 IQCB1Q15051 598 aa17.26■□□□□ 0.35
CAPN1-214ENST00000528165 TAF7Q15545 349 aaPredicted RBP17.26■□□□□ 0.35
CAPN1-214ENST00000528165 RICTORQ6R327 1708 aa17.26■□□□□ 0.35
CAPN1-214ENST00000528165 IGSF1Q8N6C5 1336 aa17.26■□□□□ 0.35
CAPN1-214ENST00000528165 CCDC69A6NI79 296 aa17.26■□□□□ 0.35
CAPN1-214ENST00000528165 SLFNL1Q499Z3 407 aa17.26■□□□□ 0.35
CAPN1-214ENST00000528165 TRMT1Q9NXH9 659 aaKnown RBP17.26■□□□□ 0.35
CAPN1-214ENST00000528165 CHD2O14647 1828 aaKnown RBP17.26■□□□□ 0.35
CAPN1-214ENST00000528165 NUTM2FA1L443 756 aa17.25■□□□□ 0.35
CAPN1-214ENST00000528165 BECN2A8MW95 431 aa17.25■□□□□ 0.35
CAPN1-214ENST00000528165 HIP1O00291 1037 aa17.25■□□□□ 0.35
CAPN1-214ENST00000528165 SLU7O95391 586 aaKnown RBP17.25■□□□□ 0.35
CAPN1-214ENST00000528165 AMPHP49418 695 aa17.25■□□□□ 0.35
CAPN1-214ENST00000528165 STK3Q13188 491 aa17.25■□□□□ 0.35
CAPN1-214ENST00000528165 FILIP1Q7Z7B0 1213 aa17.25■□□□□ 0.35
CAPN1-214ENST00000528165 USP6P35125 1406 aa17.25■□□□□ 0.35
CAPN1-214ENST00000528165 SBNO1A3KN83 1393 aa17.25■□□□□ 0.35
CAPN1-214ENST00000528165 STX1AQ16623 288 aa17.25■□□□□ 0.35
CAPN1-214ENST00000528165 FAM53CQ9NYF3 392 aa17.25■□□□□ 0.35
CAPN1-214ENST00000528165 RPS6KB1P23443 525 aa17.25■□□□□ 0.35
CAPN1-214ENST00000528165 C11orf57Q6ZUT1 292 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-214ENST00000528165 FAM227BQ96M60 508 aa17.25■□□□□ 0.35
CAPN1-214ENST00000528165 CEP170BQ9Y4F5 1589 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-214ENST00000528165 NMIQ13287 307 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-214ENST00000528165 COL9A3Q14050 684 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-214ENST00000528165 CCAR2Q8N163 923 aaKnown RBP17.24■□□□□ 0.35
CAPN1-214ENST00000528165 DNAAF4Q8WXU2 420 aa17.24■□□□□ 0.35
CAPN1-214ENST00000528165 TIGD1Q96MW7 591 aa17.24■□□□□ 0.35
CAPN1-214ENST00000528165 BABAM1Q9NWV8 329 aa17.24■□□□□ 0.35
CAPN1-214ENST00000528165 USP16Q9Y5T5 823 aa17.24■□□□□ 0.35
CAPN1-214ENST00000528165 NALCNQ8IZF0 1738 aa17.24■□□□□ 0.35
CAPN1-214ENST00000528165 KIF2AO00139 706 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-214ENST00000528165 GIGYF1O75420 1035 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-214ENST00000528165 EIF2S2P20042 333 aaKnown RBP17.24■□□□□ 0.35
CAPN1-214ENST00000528165 CDK11BP21127 795 aaKnown RBP17.24■□□□□ 0.35
CAPN1-214ENST00000528165 IL17REQ8NFR9 667 aa17.24■□□□□ 0.35
CAPN1-214ENST00000528165 CFAP45Q9UL16 551 aa17.24■□□□□ 0.35
CAPN1-214ENST00000528165 LRRC37A3O60309 1634 aa17.23■□□□□ 0.35
CAPN1-214ENST00000528165 CCZ1BP86790 482 aa17.23■□□□□ 0.35
CAPN1-214ENST00000528165 CCZ1P86791 482 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-214ENST00000528165 BEND3Q5T5X7 828 aa17.23■□□□□ 0.35
CAPN1-214ENST00000528165 NRXN3Q9Y4C0 1643 aa17.23■□□□□ 0.35
CAPN1-214ENST00000528165 PLEKHG3A1L390 1219 aa17.23■□□□□ 0.35
CAPN1-214ENST00000528165 ERICH4A6NGS2 130 aa17.23■□□□□ 0.35
CAPN1-214ENST00000528165 H3BQV1 296 aa17.23■□□□□ 0.35
CAPN1-214ENST00000528165 ZBTB22O15209 634 aa17.23■□□□□ 0.35
CAPN1-214ENST00000528165 CTAGE5O15320 804 aa17.23■□□□□ 0.35
CAPN1-214ENST00000528165 FAM193AP78312 1265 aa17.23■□□□□ 0.35
CAPN1-214ENST00000528165 TOB2Q14106 344 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-214ENST00000528165 IFFO2Q5TF58 517 aa17.23■□□□□ 0.35
CAPN1-214ENST00000528165 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
CAPN1-214ENST00000528165 ALDH8A1Q9H2A2 487 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-214ENST00000528165 TECPR2O15040 1411 aa17.23■□□□□ 0.35
CAPN1-214ENST00000528165 AACSQ86V21 672 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms