RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 CARD6Q9BX69 1037 aa14.63□□□□□ -0.07
TSKU-203ENST00000527881 RRP15Q9Y3B9 282 aaKnown RBP14.63□□□□□ -0.07
TSKU-203ENST00000527881 ERBB3P21860 1342 aa14.62□□□□□ -0.07
TSKU-203ENST00000527881 KINO60870 393 aaKnown RBP14.62□□□□□ -0.07
TSKU-203ENST00000527881 CAVIN2O95810 425 aa14.62□□□□□ -0.07
TSKU-203ENST00000527881 LARP1Q6PKG0 1096 aaKnown RBP14.62□□□□□ -0.07
TSKU-203ENST00000527881 DRC1Q96MC2 740 aa14.62□□□□□ -0.07
TSKU-203ENST00000527881 CEP57L1Q8IYX8 460 aa14.62□□□□□ -0.07
TSKU-203ENST00000527881 RUFY2Q8WXA3 655 aa14.62□□□□□ -0.07
TSKU-203ENST00000527881 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
TSKU-203ENST00000527881 LSG1Q9H089 658 aaKnown RBP14.62□□□□□ -0.07
TSKU-203ENST00000527881 VPS53Q5VIR6 699 aa14.62□□□□□ -0.07
TSKU-203ENST00000527881 ELP1O95163 1332 aa14.61□□□□□ -0.07
TSKU-203ENST00000527881 EVCP57679 992 aa14.61□□□□□ -0.07
TSKU-203ENST00000527881 CTR9Q6PD62 1173 aa14.61□□□□□ -0.07
TSKU-203ENST00000527881 ORC3Q9UBD5 711 aaPredicted RBP14.61□□□□□ -0.07
TSKU-203ENST00000527881 SKIDA1Q1XH10 827 aa14.61□□□□□ -0.07
TSKU-203ENST00000527881 MUM1L1Q5H9M0 696 aa14.61□□□□□ -0.07
TSKU-203ENST00000527881 ICE2Q659A1 982 aa14.61□□□□□ -0.07
TSKU-203ENST00000527881 USP32Q8NFA0 1604 aa14.61□□□□□ -0.07
TSKU-203ENST00000527881 YEATS2Q9ULM3 1422 aa14.61□□□□□ -0.07
TSKU-203ENST00000527881 SULT6B1Q6IMI4 303 aa14.6□□□□□ -0.07
TSKU-203ENST00000527881 TSPYL4Q9UJ04 414 aa14.6□□□□□ -0.07
TSKU-203ENST00000527881 PLCH2O75038 1416 aa14.6□□□□□ -0.07
TSKU-203ENST00000527881 UBTFL1P0CB47 393 aaPredicted RBP14.6□□□□□ -0.07
TSKU-203ENST00000527881 ATP8B2P98198 1209 aa14.6□□□□□ -0.07
TSKU-203ENST00000527881 SDF4Q9BRK5 362 aa14.6□□□□□ -0.07
TSKU-203ENST00000527881 CDK19Q9BWU1 502 aa14.6□□□□□ -0.07
TSKU-203ENST00000527881 ARFGAP3Q9NP61 516 aa14.6□□□□□ -0.07
TSKU-203ENST00000527881 STAP2Q9UGK3 403 aa14.6□□□□□ -0.07
TSKU-203ENST00000527881 TPCN1Q9ULQ1 816 aa14.6□□□□□ -0.07
TSKU-203ENST00000527881 TTC31Q49AM3 519 aaPredicted RBP14.6□□□□□ -0.07
TSKU-203ENST00000527881 NAT10Q9H0A0 1025 aaKnown RBP14.6□□□□□ -0.07
TSKU-203ENST00000527881 ANO10Q9NW15 660 aa14.6□□□□□ -0.07
TSKU-203ENST00000527881 PNPLA6Q8IY17 1366 aa14.6□□□□□ -0.07
TSKU-203ENST00000527881 HSP90B1P14625 803 aaKnown RBP14.59□□□□□ -0.07
TSKU-203ENST00000527881 IL13P35225 146 aa14.59□□□□□ -0.07
TSKU-203ENST00000527881 PTH1RQ03431 593 aa14.59□□□□□ -0.07
TSKU-203ENST00000527881 IQCB1Q15051 598 aa14.59□□□□□ -0.07
TSKU-203ENST00000527881 E4F1Q66K89 784 aaPredicted RBP14.59□□□□□ -0.07
TSKU-203ENST00000527881 PGBD1Q96JS3 809 aa14.59□□□□□ -0.07
TSKU-203ENST00000527881 TULP4Q9NRJ4 1543 aa14.59□□□□□ -0.07
TSKU-203ENST00000527881 SALL3Q9BXA9 1300 aa14.59□□□□□ -0.07
TSKU-203ENST00000527881 SOX12O15370 315 aa14.59□□□□□ -0.07
TSKU-203ENST00000527881 SARM1Q6SZW1 724 aa14.59□□□□□ -0.07
TSKU-203ENST00000527881 CCAR1Q8IX12 1150 aaKnown RBP14.59□□□□□ -0.07
TSKU-203ENST00000527881 DEF6Q9H4E7 631 aa14.59□□□□□ -0.07
TSKU-203ENST00000527881 L2HGDHQ9H9P8 463 aa14.59□□□□□ -0.07
TSKU-203ENST00000527881 UHRF1BP1LA0JNW5 1464 aa14.59□□□□□ -0.07
TSKU-203ENST00000527881 A0A1B0GUL7 405 aa14.58□□□□□ -0.07
TSKU-203ENST00000527881 GOLGA5Q8TBA6 731 aa14.58□□□□□ -0.07
TSKU-203ENST00000527881 IFNKQ9P0W0 207 aa14.58□□□□□ -0.07
TSKU-203ENST00000527881 ZRANB1Q9UGI0 708 aa14.58□□□□□ -0.07
TSKU-203ENST00000527881 NOP2P46087 812 aaKnown RBP14.58□□□□□ -0.08
TSKU-203ENST00000527881 SRLQ86TD4 932 aa14.58□□□□□ -0.08
TSKU-203ENST00000527881 MYO3AQ8NEV4 1616 aa14.58□□□□□ -0.08
TSKU-203ENST00000527881 ZFYVE9O95405 1425 aa14.58□□□□□ -0.08
TSKU-203ENST00000527881 ZSWIM4Q9H7M6 989 aa14.58□□□□□ -0.08
TSKU-203ENST00000527881 KIF1BO60333 1816 aa14.57□□□□□ -0.08
TSKU-203ENST00000527881 ANKRD65E5RJM6 399 aa14.57□□□□□ -0.08
TSKU-203ENST00000527881 TPM1P09493 284 aa14.57□□□□□ -0.08
TSKU-203ENST00000527881 ETF1P62495 437 aaKnown RBP14.57□□□□□ -0.08
TSKU-203ENST00000527881 BLOC1S2Q6QNY1 142 aa14.57□□□□□ -0.08
TSKU-203ENST00000527881 NME9Q86XW9 330 aa14.57□□□□□ -0.08
TSKU-203ENST00000527881 VPS18Q9P253 973 aa14.57□□□□□ -0.08
TSKU-203ENST00000527881 TET3O43151 1660 aa14.57□□□□□ -0.08
TSKU-203ENST00000527881 CFAP65Q6ZU64 1925 aaKnown RBP14.57□□□□□ -0.08
TSKU-203ENST00000527881 CCDC150Q8NCX0 1101 aa14.57□□□□□ -0.08
TSKU-203ENST00000527881 FBXO18Q8NFZ0 1043 aa14.57□□□□□ -0.08
TSKU-203ENST00000527881 SLC26A8Q96RN1 970 aa14.57□□□□□ -0.08
TSKU-203ENST00000527881 ADAM21Q9UKJ8 722 aa14.57□□□□□ -0.08
TSKU-203ENST00000527881 JRKLQ9Y4A0 524 aa14.57□□□□□ -0.08
TSKU-203ENST00000527881 TTC21AQ8NDW8 1320 aa14.57□□□□□ -0.08
TSKU-203ENST00000527881 ZRANB2O95218 330 aaKnown RBP eCLIP14.57□□□□□ -0.08
TSKU-203ENST00000527881 MCM6Q14566 821 aa14.57□□□□□ -0.08
TSKU-203ENST00000527881 CFAP45Q9UL16 551 aa14.57□□□□□ -0.08
TSKU-203ENST00000527881 KIAA0232Q92628 1395 aa14.56□□□□□ -0.08
TSKU-203ENST00000527881 EPB41L2O43491 1005 aaKnown RBP14.56□□□□□ -0.08
TSKU-203ENST00000527881 ME1P48163 572 aa14.56□□□□□ -0.08
TSKU-203ENST00000527881 NFATC2IPQ8NCF5 419 aa14.56□□□□□ -0.08
TSKU-203ENST00000527881 CHL1O00533 1208 aa14.56□□□□□ -0.08
TSKU-203ENST00000527881 ST3GAL1Q11201 340 aa14.56□□□□□ -0.08
TSKU-203ENST00000527881 RHPN1Q8TCX5 695 aa14.56□□□□□ -0.08
TSKU-203ENST00000527881 XPO4Q9C0E2 1151 aaKnown RBP14.56□□□□□ -0.08
TSKU-203ENST00000527881 BIN1O00499 593 aa14.55□□□□□ -0.08
TSKU-203ENST00000527881 CTAGE5O15320 804 aa14.55□□□□□ -0.08
TSKU-203ENST00000527881 SRGAP3O43295 1099 aa14.55□□□□□ -0.08
TSKU-203ENST00000527881 PSMA5P28066 241 aa14.55□□□□□ -0.08
TSKU-203ENST00000527881 SART3Q15020 963 aaKnown RBP14.55□□□□□ -0.08
TSKU-203ENST00000527881 MYCBPQ99417 103 aaPredicted RBP14.55□□□□□ -0.08
TSKU-203ENST00000527881 ZSWIM6Q9HCJ5 1215 aa14.55□□□□□ -0.08
TSKU-203ENST00000527881 GEMIN8Q9NWZ8 242 aaKnown RBP14.55□□□□□ -0.08
TSKU-203ENST00000527881 SASH3O75995 380 aa14.55□□□□□ -0.08
TSKU-203ENST00000527881 BRF1Q92994 677 aa14.55□□□□□ -0.08
TSKU-203ENST00000527881 HDAC5Q9UQL6 1122 aa14.55□□□□□ -0.08
TSKU-203ENST00000527881 RBM8AQ9Y5S9 174 aaKnown RBP14.55□□□□□ -0.08
TSKU-203ENST00000527881 E2F4Q16254 413 aa14.55□□□□□ -0.08
TSKU-203ENST00000527881 RBM43Q6ZSC3 357 aaKnown RBP14.55□□□□□ -0.08
TSKU-203ENST00000527881 COG3Q96JB2 828 aa14.55□□□□□ -0.08
TSKU-203ENST00000527881 YY1AP1Q9H869 796 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms