RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 PDE4DIPQ5VU43 2346 aa13.25□□□□□ -0.29
LAMA4-220ENST00000523765 HEG1Q9ULI3 1381 aa13.24□□□□□ -0.29
LAMA4-220ENST00000523765 SOX10P56693 466 aa13.24□□□□□ -0.29
LAMA4-220ENST00000523765 ST5P78524 1137 aa13.24□□□□□ -0.29
LAMA4-220ENST00000523765 GPC2Q8N158 579 aa13.24□□□□□ -0.29
LAMA4-220ENST00000523765 NPHP1O15259 732 aa13.23□□□□□ -0.29
LAMA4-220ENST00000523765 STARD3NLO95772 234 aa13.23□□□□□ -0.29
LAMA4-220ENST00000523765 ECE1P42892 770 aa13.23□□□□□ -0.29
LAMA4-220ENST00000523765 SP7Q8TDD2 431 aaPredicted RBP13.23□□□□□ -0.29
LAMA4-220ENST00000523765 KLRG2A4D1S0 409 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-220ENST00000523765 KCNQ3O43525 872 aa13.22□□□□□ -0.29
LAMA4-220ENST00000523765 NPR1P16066 1061 aa13.22□□□□□ -0.29
LAMA4-220ENST00000523765 IL6STP40189 918 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-220ENST00000523765 PRAMEF22A3QJZ6 481 aa13.21□□□□□ -0.29
LAMA4-220ENST00000523765 FAM177BA6PVY3 158 aa13.21□□□□□ -0.29
LAMA4-220ENST00000523765 MAP2K2P36507 400 aa13.21□□□□□ -0.29
LAMA4-220ENST00000523765 CIAPIN1Q6FI81 312 aa13.21□□□□□ -0.29
LAMA4-220ENST00000523765 SAPCD2Q86UD0 394 aa13.21□□□□□ -0.29
LAMA4-220ENST00000523765 PANK3Q9H999 370 aa13.21□□□□□ -0.29
LAMA4-220ENST00000523765 DLK2Q6UY11 383 aa13.2□□□□□ -0.3
LAMA4-220ENST00000523765 NBPF5PQ86XG9 351 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-220ENST00000523765 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
LAMA4-220ENST00000523765 TTC5Q8N0Z6 440 aa13.2□□□□□ -0.3
LAMA4-220ENST00000523765 HAX1O00165 279 aa13.19□□□□□ -0.3
LAMA4-220ENST00000523765 ZNF790Q6PG37 636 aa13.19□□□□□ -0.3
LAMA4-220ENST00000523765 MORC1Q86VD1 984 aa13.19□□□□□ -0.3
LAMA4-220ENST00000523765 RTKN2Q8IZC4 609 aa13.19□□□□□ -0.3
LAMA4-220ENST00000523765 IL17REQ8NFR9 667 aa13.19□□□□□ -0.3
LAMA4-220ENST00000523765 GLIS2Q9BZE0 524 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-220ENST00000523765 MKI67P46013 3256 aaKnown RBP13.18□□□□□ -0.3
LAMA4-220ENST00000523765 CELF2O95319 508 aaKnown RBP13.18□□□□□ -0.3
LAMA4-220ENST00000523765 LMOD1P29536 600 aaPredicted RBP13.17□□□□□ -0.3
LAMA4-220ENST00000523765 BRPF1P55201 1214 aaPredicted RBP13.17□□□□□ -0.3
LAMA4-220ENST00000523765 JDP2Q8WYK2 163 aa13.17□□□□□ -0.3
LAMA4-220ENST00000523765 PSMD1Q99460 953 aa13.17□□□□□ -0.3
LAMA4-220ENST00000523765 USP16Q9Y5T5 823 aa13.17□□□□□ -0.3
LAMA4-220ENST00000523765 ABCC12Q96J65 1359 aa13.17□□□□□ -0.3
LAMA4-220ENST00000523765 EIF6P56537 245 aaKnown RBP13.16□□□□□ -0.3
LAMA4-220ENST00000523765 USP50Q70EL3 339 aaPredicted RBP13.16□□□□□ -0.3
LAMA4-220ENST00000523765 PRR29P0C7W0 189 aa13.15□□□□□ -0.3
LAMA4-220ENST00000523765 HLFQ16534 295 aa13.15□□□□□ -0.3
LAMA4-220ENST00000523765 PRPF38BQ5VTL8 546 aaKnown RBP13.15□□□□□ -0.3
LAMA4-220ENST00000523765 ZNF408Q9H9D4 720 aa13.15□□□□□ -0.3
LAMA4-220ENST00000523765 SHTN1A0MZ66 631 aa13.14□□□□□ -0.31
LAMA4-220ENST00000523765 NBPF26B4DH59 902 aa13.14□□□□□ -0.31
LAMA4-220ENST00000523765 CA12O43570 354 aa13.14□□□□□ -0.31
LAMA4-220ENST00000523765 HIRAP54198 1017 aaPredicted RBP13.14□□□□□ -0.31
LAMA4-220ENST00000523765 NBPF10Q6P3W6 841 aaKnown RBP13.14□□□□□ -0.31
LAMA4-220ENST00000523765 NBPF15Q8N660 670 aa13.14□□□□□ -0.31
LAMA4-220ENST00000523765 TEX13AQ9BXU3 409 aaPredicted RBP13.14□□□□□ -0.31
LAMA4-220ENST00000523765 GPRC5DQ9NZD1 345 aa13.14□□□□□ -0.31
LAMA4-220ENST00000523765 NIP7Q9Y221 180 aaKnown RBP eCLIP13.14□□□□□ -0.31
LAMA4-220ENST00000523765 TCERG1O14776 1098 aaKnown RBP13.13□□□□□ -0.31
LAMA4-220ENST00000523765 ALDH1B1P30837 517 aa13.13□□□□□ -0.31
LAMA4-220ENST00000523765 TPTE2Q6XPS3 522 aa13.13□□□□□ -0.31
LAMA4-220ENST00000523765 NUTM1Q86Y26 1132 aa13.13□□□□□ -0.31
LAMA4-220ENST00000523765 LARGE2Q8N3Y3 721 aa13.13□□□□□ -0.31
LAMA4-220ENST00000523765 FMNL2Q96PY5 1086 aa13.13□□□□□ -0.31
LAMA4-220ENST00000523765 NUP98P52948 1817 aa13.13□□□□□ -0.31
LAMA4-220ENST00000523765 FAM155AB1AL88 458 aaPredicted RBP13.12□□□□□ -0.31
LAMA4-220ENST00000523765 TEFQ10587 303 aa13.12□□□□□ -0.31
LAMA4-220ENST00000523765 CRY2Q49AN0 593 aa13.12□□□□□ -0.31
LAMA4-220ENST00000523765 CLEC4GQ6UXB4 293 aa13.12□□□□□ -0.31
LAMA4-220ENST00000523765 HHIPL1Q96JK4 782 aa13.12□□□□□ -0.31
LAMA4-220ENST00000523765 ADARB2Q9NS39 739 aaKnown RBP13.12□□□□□ -0.31
LAMA4-220ENST00000523765 HTTP42858 3142 aa13.11□□□□□ -0.31
LAMA4-220ENST00000523765 C19orf67A6NJJ6 358 aa13.11□□□□□ -0.31
LAMA4-220ENST00000523765 GMPSP49915 693 aaPredicted RBP13.11□□□□□ -0.31
LAMA4-220ENST00000523765 CXCL9Q07325 125 aa13.11□□□□□ -0.31
LAMA4-220ENST00000523765 AOC3Q16853 763 aa13.11□□□□□ -0.31
LAMA4-220ENST00000523765 C3orf67Q6ZVT6 689 aa13.11□□□□□ -0.31
LAMA4-220ENST00000523765 TRPM4Q8TD43 1214 aa13.11□□□□□ -0.31
LAMA4-220ENST00000523765 PGAP2Q9UHJ9 254 aa13.11□□□□□ -0.31
LAMA4-220ENST00000523765 CENPFP49454 3210 aa13.11□□□□□ -0.31
LAMA4-220ENST00000523765 COL3A1P02461 1466 aaPredicted RBP13.1□□□□□ -0.31
LAMA4-220ENST00000523765 NPC1L1Q9UHC9 1359 aa13.1□□□□□ -0.31
LAMA4-220ENST00000523765 GNAT3A8MTJ3 354 aa13.1□□□□□ -0.31
LAMA4-220ENST00000523765 NPM2Q86SE8 214 aaKnown RBP13.1□□□□□ -0.31
LAMA4-220ENST00000523765 AKAP11Q9UKA4 1901 aa13.09□□□□□ -0.31
LAMA4-220ENST00000523765 CEMIPQ8WUJ3 1361 aa13.09□□□□□ -0.31
LAMA4-220ENST00000523765 POLR2AP24928 1970 aaKnown RBP13.09□□□□□ -0.31
LAMA4-220ENST00000523765 HUNKP57058 714 aa13.09□□□□□ -0.31
LAMA4-220ENST00000523765 RIC1Q4ADV7 1423 aa13.09□□□□□ -0.31
LAMA4-220ENST00000523765 NIM1KQ8IY84 436 aa13.09□□□□□ -0.31
LAMA4-220ENST00000523765 BRCA2P51587 3418 aa13.09□□□□□ -0.31
LAMA4-220ENST00000523765 BTBD11A6QL63 1104 aa13.08□□□□□ -0.32
LAMA4-220ENST00000523765 PPIP5K2O43314 1243 aa13.08□□□□□ -0.32
LAMA4-220ENST00000523765 TRPA1O75762 1119 aa13.08□□□□□ -0.32
LAMA4-220ENST00000523765 KIF23Q02241 960 aaPredicted RBP13.08□□□□□ -0.32
LAMA4-220ENST00000523765 NOGQ13253 232 aa13.08□□□□□ -0.32
LAMA4-220ENST00000523765 AMER1Q5JTC6 1135 aaPredicted RBP13.08□□□□□ -0.32
LAMA4-220ENST00000523765 USP48Q86UV5 1035 aa13.08□□□□□ -0.32
LAMA4-220ENST00000523765 RNF186Q9NXI6 227 aa13.08□□□□□ -0.32
LAMA4-220ENST00000523765 ZNF652Q9Y2D9 606 aa13.08□□□□□ -0.32
LAMA4-220ENST00000523765 TAF1P21675 1872 aa13.08□□□□□ -0.32
LAMA4-220ENST00000523765 LAMB4A4D0S4 1761 aa13.07□□□□□ -0.32
LAMA4-220ENST00000523765 LAMB2P55268 1798 aa13.07□□□□□ -0.32
LAMA4-220ENST00000523765 PPEF1O14829 653 aaPredicted RBP13.07□□□□□ -0.32
LAMA4-220ENST00000523765 DIAPH1O60610 1272 aaKnown RBP13.07□□□□□ -0.32
LAMA4-220ENST00000523765 HOXA10P31260 410 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms