RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 FOXO4P98177 505 aa11.89□□□□□ -0.51
SPARC-205ENST00000522348 LMBR1LQ6UX01 489 aa11.89□□□□□ -0.51
SPARC-205ENST00000522348 TBC1D9Q6ZT07 1266 aa11.89□□□□□ -0.51
SPARC-205ENST00000522348 DZIP3Q86Y13 1208 aaKnown RBP11.89□□□□□ -0.51
SPARC-205ENST00000522348 JARID2Q92833 1246 aaPredicted RBP11.89□□□□□ -0.51
SPARC-205ENST00000522348 GPATCH3Q96I76 525 aa11.89□□□□□ -0.51
SPARC-205ENST00000522348 C22orf23Q9BZE7 217 aa11.89□□□□□ -0.51
SPARC-205ENST00000522348 DAXXQ9UER7 740 aaPredicted RBP11.89□□□□□ -0.51
SPARC-205ENST00000522348 PA2G4Q9UQ80 394 aaKnown RBP11.89□□□□□ -0.51
SPARC-205ENST00000522348 TTC41PQ6P2S7 1318 aa11.88□□□□□ -0.51
SPARC-205ENST00000522348 ERC2O15083 957 aa11.88□□□□□ -0.51
SPARC-205ENST00000522348 IFIT2P09913 472 aaKnown RBP11.88□□□□□ -0.51
SPARC-205ENST00000522348 RFX5P48382 616 aaPredicted RBP11.88□□□□□ -0.51
SPARC-205ENST00000522348 HLFQ16534 295 aa11.88□□□□□ -0.51
SPARC-205ENST00000522348 NUTM1Q86Y26 1132 aa11.88□□□□□ -0.51
SPARC-205ENST00000522348 ZBTB38Q8NAP3 1195 aaPredicted RBP11.88□□□□□ -0.51
SPARC-205ENST00000522348 PLA2G12BQ9BX93 195 aa11.88□□□□□ -0.51
SPARC-205ENST00000522348 USP42Q9H9J4 1324 aaKnown RBP11.87□□□□□ -0.51
SPARC-205ENST00000522348 MSH5O43196 834 aa11.87□□□□□ -0.51
SPARC-205ENST00000522348 SASH1O94885 1247 aa11.87□□□□□ -0.51
SPARC-205ENST00000522348 PTPN12Q05209 780 aaKnown RBP11.87□□□□□ -0.51
SPARC-205ENST00000522348 ITPK1Q13572 414 aa11.87□□□□□ -0.51
SPARC-205ENST00000522348 RC3H1Q5TC82 1133 aaKnown RBP11.87□□□□□ -0.51
SPARC-205ENST00000522348 KRT27Q7Z3Y8 459 aa11.87□□□□□ -0.51
SPARC-205ENST00000522348 NLRP10Q86W26 655 aa11.87□□□□□ -0.51
SPARC-205ENST00000522348 ZNF34Q8IZ26 560 aa11.87□□□□□ -0.51
SPARC-205ENST00000522348 TBC1D2BQ9UPU7 963 aa11.87□□□□□ -0.51
SPARC-205ENST00000522348 CDHR2Q9BYE9 1310 aa11.86□□□□□ -0.51
SPARC-205ENST00000522348 RGL2O15211 777 aa11.86□□□□□ -0.51
SPARC-205ENST00000522348 GLRX3O76003 335 aaKnown RBP11.86□□□□□ -0.51
SPARC-205ENST00000522348 HSP90B1P14625 803 aaKnown RBP11.86□□□□□ -0.51
SPARC-205ENST00000522348 RBM25P49756 843 aaKnown RBP11.86□□□□□ -0.51
SPARC-205ENST00000522348 BECN1Q14457 450 aa11.86□□□□□ -0.51
SPARC-205ENST00000522348 AK7Q96M32 723 aa11.86□□□□□ -0.51
SPARC-205ENST00000522348 ECHDC1Q9NTX5 307 aa11.86□□□□□ -0.51
SPARC-205ENST00000522348 FBXO3Q9UK99 471 aa11.86□□□□□ -0.51
SPARC-205ENST00000522348 DOT1LQ8TEK3 1739 aa11.86□□□□□ -0.51
SPARC-205ENST00000522348 ARFGEF2Q9Y6D5 1785 aa11.85□□□□□ -0.51
SPARC-205ENST00000522348 TRIM6-TRIM34B2RNG4 842 aa11.85□□□□□ -0.51
SPARC-205ENST00000522348 CSF1RP07333 972 aa11.85□□□□□ -0.51
SPARC-205ENST00000522348 HMGB2P26583 209 aaKnown RBP11.85□□□□□ -0.51
SPARC-205ENST00000522348 PARP10Q53GL7 1025 aa11.85□□□□□ -0.51
SPARC-205ENST00000522348 CLEC4GQ6UXB4 293 aa11.85□□□□□ -0.51
SPARC-205ENST00000522348 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
SPARC-205ENST00000522348 AACSQ86V21 672 aa11.85□□□□□ -0.51
SPARC-205ENST00000522348 FAM89AQ96GI7 184 aa11.85□□□□□ -0.51
SPARC-205ENST00000522348 SIL1Q9H173 461 aa11.85□□□□□ -0.51
SPARC-205ENST00000522348 CHMP3Q9Y3E7 222 aa11.85□□□□□ -0.51
SPARC-205ENST00000522348 CIAO1O76071 339 aa11.84□□□□□ -0.51
SPARC-205ENST00000522348 REC8O95072 547 aa11.84□□□□□ -0.51
SPARC-205ENST00000522348 GPTP24298 496 aa11.84□□□□□ -0.51
SPARC-205ENST00000522348 IL15P40933 162 aaPredicted RBP11.84□□□□□ -0.51
SPARC-205ENST00000522348 SF3B2Q13435 895 aaKnown RBP11.84□□□□□ -0.51
SPARC-205ENST00000522348 CCDC57Q2TAC2 916 aa11.84□□□□□ -0.51
SPARC-205ENST00000522348 RTL5Q5HYW3 569 aaPredicted RBP11.84□□□□□ -0.51
SPARC-205ENST00000522348 PI4K2BQ8TCG2 481 aa11.84□□□□□ -0.51
SPARC-205ENST00000522348 RILPL2Q969X0 211 aa11.84□□□□□ -0.51
SPARC-205ENST00000522348 EAF2Q96CJ1 260 aaPredicted RBP11.84□□□□□ -0.51
SPARC-205ENST00000522348 BCL11BQ9C0K0 894 aaPredicted RBP11.84□□□□□ -0.51
SPARC-205ENST00000522348 GPR108Q9NPR9 543 aa11.84□□□□□ -0.51
SPARC-205ENST00000522348 TRMT112Q9UI30 125 aaKnown RBP11.84□□□□□ -0.51
SPARC-205ENST00000522348 ZNF652Q9Y2D9 606 aa11.84□□□□□ -0.51
SPARC-205ENST00000522348 EYA2O00167 538 aa11.83□□□□□ -0.52
SPARC-205ENST00000522348 CAMTA2O94983 1202 aa11.83□□□□□ -0.52
SPARC-205ENST00000522348 CNTROBQ8N137 903 aa11.83□□□□□ -0.52
SPARC-205ENST00000522348 KLHDC4Q8TBB5 520 aa11.83□□□□□ -0.52
SPARC-205ENST00000522348 CNTNAP4Q9C0A0 1308 aa11.83□□□□□ -0.52
SPARC-205ENST00000522348 THSD7AQ9UPZ6 1657 aa11.82□□□□□ -0.52
SPARC-205ENST00000522348 IRS4O14654 1257 aaPredicted RBP11.82□□□□□ -0.52
SPARC-205ENST00000522348 EPB41L2O43491 1005 aaKnown RBP11.82□□□□□ -0.52
SPARC-205ENST00000522348 PDE8AO60658 829 aa11.82□□□□□ -0.52
SPARC-205ENST00000522348 RPS6KA4O75676 772 aa11.82□□□□□ -0.52
SPARC-205ENST00000522348 CHMLP26374 656 aa11.82□□□□□ -0.52
SPARC-205ENST00000522348 TFCP2Q12800 502 aa11.82□□□□□ -0.52
SPARC-205ENST00000522348 IFIT5Q13325 482 aaKnown RBP11.82□□□□□ -0.52
SPARC-205ENST00000522348 TSHZ3Q63HK5 1081 aa11.82□□□□□ -0.52
SPARC-205ENST00000522348 FAM196AQ6ZSG2 479 aa11.82□□□□□ -0.52
SPARC-205ENST00000522348 LINC00116Q8NCU8 138 aa11.82□□□□□ -0.52
SPARC-205ENST00000522348 UTP14AQ9BVJ6 771 aaKnown RBP11.82□□□□□ -0.52
SPARC-205ENST00000522348 USP26Q9BXU7 913 aa11.82□□□□□ -0.52
SPARC-205ENST00000522348 CCDC8Q9H0W5 538 aaPredicted RBP11.82□□□□□ -0.52
SPARC-205ENST00000522348 NUP188Q5SRE5 1749 aa11.82□□□□□ -0.52
SPARC-205ENST00000522348 TJP1Q07157 1748 aa11.81□□□□□ -0.52
SPARC-205ENST00000522348 TNNI3KQ59H18 835 aa11.81□□□□□ -0.52
SPARC-205ENST00000522348 FAM182BQ5T319 152 aa11.81□□□□□ -0.52
SPARC-205ENST00000522348 ATG9AQ7Z3C6 839 aa11.81□□□□□ -0.52
SPARC-205ENST00000522348 EVI5LQ96CN4 794 aa11.81□□□□□ -0.52
SPARC-205ENST00000522348 CCNL1Q9UK58 526 aaPredicted RBP11.81□□□□□ -0.52
SPARC-205ENST00000522348 FPGT-TNNI3KV9GXZ4 949 aa11.81□□□□□ -0.52
SPARC-205ENST00000522348 CICQ96RK0 1608 aaPredicted RBP11.8□□□□□ -0.52
SPARC-205ENST00000522348 ANKRD18BA2A2Z9 1011 aa11.8□□□□□ -0.52
SPARC-205ENST00000522348 HIP1O00291 1037 aa11.8□□□□□ -0.52
SPARC-205ENST00000522348 ATP5JP18859 108 aa11.8□□□□□ -0.52
SPARC-205ENST00000522348 TAF7LQ5H9L4 462 aa11.8□□□□□ -0.52
SPARC-205ENST00000522348 SUSD4Q5VX71 490 aa11.8□□□□□ -0.52
SPARC-205ENST00000522348 PTF1AQ7RTS3 328 aa11.8□□□□□ -0.52
SPARC-205ENST00000522348 TTLL11Q8NHH1 800 aa11.8□□□□□ -0.52
SPARC-205ENST00000522348 UPF1Q92900 1129 aaKnown RBP eCLIP11.8□□□□□ -0.52
SPARC-205ENST00000522348 ESYT1Q9BSJ8 1104 aa11.8□□□□□ -0.52
SPARC-205ENST00000522348 CEP126Q9P2H0 1117 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms