RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 ZNF211Q13398 564 aaPredicted RBP9.76□□□□□ -0.85
SQLE-203ENST00000518931 GRIN2CQ14957 1233 aa9.76□□□□□ -0.85
SQLE-203ENST00000518931 AEBP1Q8IUX7 1158 aa9.76□□□□□ -0.85
SQLE-203ENST00000518931 NSFL1CQ9UNZ2 370 aaKnown RBP9.76□□□□□ -0.85
SQLE-203ENST00000518931 IGF1RP08069 1367 aa9.75□□□□□ -0.85
SQLE-203ENST00000518931 BMP4P12644 408 aa9.75□□□□□ -0.85
SQLE-203ENST00000518931 KCNQ4P56696 695 aa9.75□□□□□ -0.85
SQLE-203ENST00000518931 ABTB2Q8N961 1025 aa9.75□□□□□ -0.85
SQLE-203ENST00000518931 USP20Q9Y2K6 914 aa9.75□□□□□ -0.85
SQLE-203ENST00000518931 MPSTP25325 297 aa9.74□□□□□ -0.85
SQLE-203ENST00000518931 ZAP70P43403 619 aa9.74□□□□□ -0.85
SQLE-203ENST00000518931 SRSF11Q05519 484 aaKnown RBP9.74□□□□□ -0.85
SQLE-203ENST00000518931 SF3B2Q13435 895 aaKnown RBP9.74□□□□□ -0.85
SQLE-203ENST00000518931 FAM182BQ5T319 152 aa9.74□□□□□ -0.85
SQLE-203ENST00000518931 EGFL7Q9UHF1 273 aa9.74□□□□□ -0.85
SQLE-203ENST00000518931 WIPF1O43516 503 aa9.73□□□□□ -0.85
SQLE-203ENST00000518931 ICMTO60725 284 aa9.73□□□□□ -0.85
SQLE-203ENST00000518931 ADAMTS2O95450 1211 aa9.73□□□□□ -0.85
SQLE-203ENST00000518931 EPB42P16452 691 aa9.73□□□□□ -0.85
SQLE-203ENST00000518931 KCNA1Q09470 495 aa9.73□□□□□ -0.85
SQLE-203ENST00000518931 NOM1Q5C9Z4 860 aaKnown RBP9.73□□□□□ -0.85
SQLE-203ENST00000518931 RGL4Q8IZJ4 473 aa9.73□□□□□ -0.85
SQLE-203ENST00000518931 PRR12Q9ULL5 1215 aa9.73□□□□□ -0.85
SQLE-203ENST00000518931 GNEQ9Y223 722 aaKnown RBP9.73□□□□□ -0.85
SQLE-203ENST00000518931 RTCBQ9Y3I0 505 aaKnown RBP9.73□□□□□ -0.85
SQLE-203ENST00000518931 FAM13AO94988 1023 aa9.72□□□□□ -0.85
SQLE-203ENST00000518931 GRNP28799 593 aaKnown RBP9.72□□□□□ -0.85
SQLE-203ENST00000518931 AAMPQ13685 434 aa9.72□□□□□ -0.85
SQLE-203ENST00000518931 ATCAYQ86WG3 371 aa9.72□□□□□ -0.85
SQLE-203ENST00000518931 CMTR1Q8N1G2 835 aaKnown RBP9.72□□□□□ -0.85
SQLE-203ENST00000518931 SLC30A3Q99726 388 aa9.72□□□□□ -0.85
SQLE-203ENST00000518931 NPR3P17342 541 aa9.71□□□□□ -0.86
SQLE-203ENST00000518931 MAP2K3P46734 347 aa9.71□□□□□ -0.86
SQLE-203ENST00000518931 EIF1AXP47813 144 aaKnown RBP9.71□□□□□ -0.86
SQLE-203ENST00000518931 SPEM2Q0P670 501 aa9.71□□□□□ -0.86
SQLE-203ENST00000518931 GLYCTKQ8IVS8 523 aa9.71□□□□□ -0.86
SQLE-203ENST00000518931 GPR152Q8TDT2 470 aa9.71□□□□□ -0.86
SQLE-203ENST00000518931 FAM13BQ9NYF5 915 aa9.71□□□□□ -0.86
SQLE-203ENST00000518931 IVNS1ABPQ9Y6Y0 642 aa9.71□□□□□ -0.86
SQLE-203ENST00000518931 H3BRB1 525 aa9.7□□□□□ -0.86
SQLE-203ENST00000518931 ALKBH2Q6NS38 261 aa9.7□□□□□ -0.86
SQLE-203ENST00000518931 KCTD17Q8N5Z5 321 aa9.7□□□□□ -0.86
SQLE-203ENST00000518931 PIK3R5Q8WYR1 880 aa9.7□□□□□ -0.86
SQLE-203ENST00000518931 GSX2Q9BZM3 304 aa9.7□□□□□ -0.86
SQLE-203ENST00000518931 TUT1Q9H6E5 874 aaKnown RBP9.7□□□□□ -0.86
SQLE-203ENST00000518931 SLURP2P0DP57 97 aa9.69□□□□□ -0.86
SQLE-203ENST00000518931 CCINQ13939 588 aa9.69□□□□□ -0.86
SQLE-203ENST00000518931 RAB44Q7Z6P3 723 aaPredicted RBP9.69□□□□□ -0.86
SQLE-203ENST00000518931 PCBP4P57723 403 aaKnown RBP9.68□□□□□ -0.86
SQLE-203ENST00000518931 DNM1Q05193 864 aaKnown RBP9.68□□□□□ -0.86
SQLE-203ENST00000518931 ACDQ96AP0 544 aa9.68□□□□□ -0.86
SQLE-203ENST00000518931 SOWAHDA6NJG2 315 aa9.67□□□□□ -0.86
SQLE-203ENST00000518931 PATL2C9JE40 543 aaKnown RBP9.67□□□□□ -0.86
SQLE-203ENST00000518931 ECM1Q16610 540 aa9.67□□□□□ -0.86
SQLE-203ENST00000518931 SYT9Q86SS6 491 aa9.67□□□□□ -0.86
SQLE-203ENST00000518931 EDEM1Q92611 657 aa9.67□□□□□ -0.86
SQLE-203ENST00000518931 BHMTQ93088 406 aa9.67□□□□□ -0.86
SQLE-203ENST00000518931 OXCT2Q9BYC2 517 aaPredicted RBP9.67□□□□□ -0.86
SQLE-203ENST00000518931 KCNMB2Q9Y691 235 aa9.67□□□□□ -0.86
SQLE-203ENST00000518931 NEURL1BA8MQ27 555 aa9.66□□□□□ -0.86
SQLE-203ENST00000518931 XYLBO75191 536 aa9.66□□□□□ -0.86
SQLE-203ENST00000518931 SASH3O75995 380 aa9.66□□□□□ -0.86
SQLE-203ENST00000518931 ARAFP10398 606 aa9.66□□□□□ -0.86
SQLE-203ENST00000518931 TARSP26639 723 aaKnown RBP9.66□□□□□ -0.86
SQLE-203ENST00000518931 NEUROD1Q13562 356 aa9.66□□□□□ -0.86
SQLE-203ENST00000518931 ZNF468Q5VIY5 522 aaPredicted RBP9.66□□□□□ -0.86
SQLE-203ENST00000518931 KRT25Q7Z3Z0 450 aa9.66□□□□□ -0.86
SQLE-203ENST00000518931 WHAMMQ8TF30 809 aa9.66□□□□□ -0.86
SQLE-203ENST00000518931 NUDT16Q96DE0 195 aaKnown RBP9.66□□□□□ -0.86
SQLE-203ENST00000518931 PNMA5Q96PV4 448 aa9.66□□□□□ -0.86
SQLE-203ENST00000518931 C11orf16Q9NQ32 467 aa9.66□□□□□ -0.86
SQLE-203ENST00000518931 KLF15Q9UIH9 416 aa9.66□□□□□ -0.86
SQLE-203ENST00000518931 GGA1Q9UJY5 639 aa9.66□□□□□ -0.86
SQLE-203ENST00000518931 UBAP1LF5GYI3 381 aa9.65□□□□□ -0.86
SQLE-203ENST00000518931 LYPD4Q6UWN0 246 aa9.65□□□□□ -0.86
SQLE-203ENST00000518931 CCDC87Q9NVE4 849 aa9.65□□□□□ -0.86
SQLE-203ENST00000518931 POLIQ9UNA4 740 aa9.65□□□□□ -0.86
SQLE-203ENST00000518931 FZD6O60353 706 aa9.64□□□□□ -0.87
SQLE-203ENST00000518931 EGFRP00533 1210 aa9.64□□□□□ -0.87
SQLE-203ENST00000518931 PCSK2P16519 638 aa9.64□□□□□ -0.87
SQLE-203ENST00000518931 ADH6P28332 368 aa9.64□□□□□ -0.87
SQLE-203ENST00000518931 MZF1P28698 734 aaPredicted RBP9.64□□□□□ -0.87
SQLE-203ENST00000518931 AVENQ9NQS1 362 aaPredicted RBP9.64□□□□□ -0.87
SQLE-203ENST00000518931 BIN2Q9UBW5 565 aaPredicted RBP9.64□□□□□ -0.87
SQLE-203ENST00000518931 GDF2Q9UK05 429 aaPredicted RBP9.64□□□□□ -0.87
SQLE-203ENST00000518931 FNDC3AQ9Y2H6 1198 aaKnown RBP9.64□□□□□ -0.87
SQLE-203ENST00000518931 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.64□□□□□ -0.87
SQLE-203ENST00000518931 PDGFAP04085 211 aa9.63□□□□□ -0.87
SQLE-203ENST00000518931 CELA2BP08218 269 aaPredicted RBP9.63□□□□□ -0.87
SQLE-203ENST00000518931 NFKB1P19838 968 aa9.63□□□□□ -0.87
SQLE-203ENST00000518931 ARHGAP4P98171 946 aa9.63□□□□□ -0.87
SQLE-203ENST00000518931 INSM1Q01101 510 aaPredicted RBP9.63□□□□□ -0.87
SQLE-203ENST00000518931 TRIP4Q15650 581 aaPredicted RBP9.63□□□□□ -0.87
SQLE-203ENST00000518931 GOLGA6L1Q8N7Z2 621 aa9.63□□□□□ -0.87
SQLE-203ENST00000518931 ZSCAN1Q8NBB4 408 aa9.63□□□□□ -0.87
SQLE-203ENST00000518931 IGFLR1Q9H665 355 aa9.63□□□□□ -0.87
SQLE-203ENST00000518931 EFCC1Q9HA90 598 aa9.63□□□□□ -0.87
SQLE-203ENST00000518931 BCRP11274 1271 aa9.62□□□□□ -0.87
SQLE-203ENST00000518931 LORP23490 312 aaPredicted RBP9.62□□□□□ -0.87
SQLE-203ENST00000518931 C8orf34Q49A92 452 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms