RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 PCCAP05165 728 aaPredicted RBP9.44□□□□□ -0.9
SCARNA20.1-201ENST00000516009 GPTP24298 496 aa9.44□□□□□ -0.9
SCARNA20.1-201ENST00000516009 KCNQ4P56696 695 aa9.44□□□□□ -0.9
SCARNA20.1-201ENST00000516009 RABL6Q3YEC7 729 aaPredicted RBP9.44□□□□□ -0.9
SCARNA20.1-201ENST00000516009 C8orf34Q49A92 452 aa9.44□□□□□ -0.9
SCARNA20.1-201ENST00000516009 NLRP10Q86W26 655 aa9.44□□□□□ -0.9
SCARNA20.1-201ENST00000516009 ERC1Q8IUD2 1116 aa9.44□□□□□ -0.9
SCARNA20.1-201ENST00000516009 KIF1BPQ96EK5 621 aa9.44□□□□□ -0.9
SCARNA20.1-201ENST00000516009 TRIM37O94972 964 aa9.43□□□□□ -0.9
SCARNA20.1-201ENST00000516009 CAMTA2O94983 1202 aa9.43□□□□□ -0.9
SCARNA20.1-201ENST00000516009 BMP2KLQ5H9B9 411 aa9.43□□□□□ -0.9
SCARNA20.1-201ENST00000516009 RTL5Q5HYW3 569 aaPredicted RBP9.43□□□□□ -0.9
SCARNA20.1-201ENST00000516009 PLEKHM2Q8IWE5 1019 aa9.43□□□□□ -0.9
SCARNA20.1-201ENST00000516009 C16orf71Q8IYS4 520 aaPredicted RBP9.43□□□□□ -0.9
SCARNA20.1-201ENST00000516009 ZNF34Q8IZ26 560 aa9.43□□□□□ -0.9
SCARNA20.1-201ENST00000516009 ZBTB38Q8NAP3 1195 aaPredicted RBP9.43□□□□□ -0.9
SCARNA20.1-201ENST00000516009 RHPN1Q8TCX5 695 aa9.43□□□□□ -0.9
SCARNA20.1-201ENST00000516009 ZNF652Q9Y2D9 606 aa9.43□□□□□ -0.9
SCARNA20.1-201ENST00000516009 TUBGCP6Q96RT7 1819 aa9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 LAMB2P55268 1798 aa9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 C4AP0C0L4 1744 aa9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 CDHR2Q9BYE9 1310 aa9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 RGL2O15211 777 aa9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 GNPATO15228 680 aa9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 RPS6KA4O75676 772 aa9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 FOXO4P98177 505 aa9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 G3BP1Q13283 466 aaKnown RBP eCLIP9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 LMBR1LQ6UX01 489 aa9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 OTUD7AQ8TE49 926 aaPredicted RBP9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 COPRSQ9NQ92 184 aa9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 TRMT112Q9UI30 125 aaKnown RBP9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 PA2G4Q9UQ80 394 aaKnown RBP9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 CHMP3Q9Y3E7 222 aa9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 AK9Q5TCS8 1911 aa9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 UBR3Q6ZT12 1888 aa9.42□□□□□ -0.9
SCARNA20.1-201ENST00000516009 HMGB2P26583 209 aaKnown RBP9.41□□□□□ -0.9
SCARNA20.1-201ENST00000516009 PARP10Q53GL7 1025 aa9.41□□□□□ -0.9
SCARNA20.1-201ENST00000516009 SLC27A3Q5K4L6 730 aa9.41□□□□□ -0.9
SCARNA20.1-201ENST00000516009 TTC22Q5TAA0 569 aa9.41□□□□□ -0.9
SCARNA20.1-201ENST00000516009 CLEC4GQ6UXB4 293 aa9.41□□□□□ -0.9
SCARNA20.1-201ENST00000516009 FAM89AQ96GI7 184 aa9.41□□□□□ -0.9
SCARNA20.1-201ENST00000516009 PLA2G12BQ9BX93 195 aa9.41□□□□□ -0.9
SCARNA20.1-201ENST00000516009 OSBPL3Q9H4L5 887 aa9.41□□□□□ -0.9
SCARNA20.1-201ENST00000516009 IL1RAPL2Q9NP60 686 aa9.41□□□□□ -0.9
SCARNA20.1-201ENST00000516009 RTCBQ9Y3I0 505 aaKnown RBP9.41□□□□□ -0.9
SCARNA20.1-201ENST00000516009 DDX60Q8IY21 1712 aaKnown RBP9.41□□□□□ -0.9
SCARNA20.1-201ENST00000516009 TNS1Q9HBL0 1735 aaKnown RBP9.4□□□□□ -0.9
SCARNA20.1-201ENST00000516009 UBN2Q6ZU65 1347 aa9.4□□□□□ -0.9
SCARNA20.1-201ENST00000516009 SALL3Q9BXA9 1300 aa9.4□□□□□ -0.9
SCARNA20.1-201ENST00000516009 MX1P20591 662 aa9.4□□□□□ -0.9
SCARNA20.1-201ENST00000516009 RFX5P48382 616 aaPredicted RBP9.4□□□□□ -0.9
SCARNA20.1-201ENST00000516009 PDE1AP54750 535 aa9.4□□□□□ -0.9
SCARNA20.1-201ENST00000516009 CLASRPQ8N2M8 674 aaKnown RBP9.4□□□□□ -0.9
SCARNA20.1-201ENST00000516009 KLHDC4Q8TBB5 520 aa9.4□□□□□ -0.9
SCARNA20.1-201ENST00000516009 AK7Q96M32 723 aa9.4□□□□□ -0.9
SCARNA20.1-201ENST00000516009 UTP14AQ9BVJ6 771 aaKnown RBP9.4□□□□□ -0.9
SCARNA20.1-201ENST00000516009 SIL1Q9H173 461 aa9.4□□□□□ -0.9
SCARNA20.1-201ENST00000516009 RGS17Q9UGC6 210 aaPredicted RBP9.4□□□□□ -0.9
SCARNA20.1-201ENST00000516009 NARFQ9UHQ1 456 aa9.4□□□□□ -0.9
SCARNA20.1-201ENST00000516009 NIP7Q9Y221 180 aaKnown RBP eCLIP9.4□□□□□ -0.9
SCARNA20.1-201ENST00000516009 CASZ1Q86V15 1759 aa9.4□□□□□ -0.91
SCARNA20.1-201ENST00000516009 COL24A1Q17RW2 1714 aa9.39□□□□□ -0.91
SCARNA20.1-201ENST00000516009 EP400Q96L91 3159 aa9.39□□□□□ -0.91
SCARNA20.1-201ENST00000516009 AOX1Q06278 1338 aa9.39□□□□□ -0.91
SCARNA20.1-201ENST00000516009 SH3TC1Q8TE82 1336 aa9.39□□□□□ -0.91
SCARNA20.1-201ENST00000516009 IRS4O14654 1257 aaPredicted RBP9.39□□□□□ -0.91
SCARNA20.1-201ENST00000516009 ZPR1O75312 459 aa9.39□□□□□ -0.91
SCARNA20.1-201ENST00000516009 HSP90B1P14625 803 aaKnown RBP9.39□□□□□ -0.91
SCARNA20.1-201ENST00000516009 PTPN12Q05209 780 aaKnown RBP9.39□□□□□ -0.91
SCARNA20.1-201ENST00000516009 CCDC57Q2TAC2 916 aa9.39□□□□□ -0.91
SCARNA20.1-201ENST00000516009 SUSD4Q5VX71 490 aa9.39□□□□□ -0.91
SCARNA20.1-201ENST00000516009 POTEAQ6S8J7 498 aa9.39□□□□□ -0.91
SCARNA20.1-201ENST00000516009 LRRC4BQ9NT99 713 aa9.39□□□□□ -0.91
SCARNA20.1-201ENST00000516009 STAP2Q9UGK3 403 aa9.39□□□□□ -0.91
SCARNA20.1-201ENST00000516009 RGPD3A6NKT7 1758 aaPredicted RBP9.39□□□□□ -0.91
SCARNA20.1-201ENST00000516009 RGPD4Q7Z3J3 1758 aa9.39□□□□□ -0.91
SCARNA20.1-201ENST00000516009 FAM177BA6PVY3 158 aa9.38□□□□□ -0.91
SCARNA20.1-201ENST00000516009 PDE8AO60658 829 aa9.38□□□□□ -0.91
SCARNA20.1-201ENST00000516009 SASH1O94885 1247 aa9.38□□□□□ -0.91
SCARNA20.1-201ENST00000516009 CSF1RP07333 972 aa9.38□□□□□ -0.91
SCARNA20.1-201ENST00000516009 IFIT2P09913 472 aaKnown RBP9.38□□□□□ -0.91
SCARNA20.1-201ENST00000516009 GSPT1P15170 499 aaKnown RBP9.38□□□□□ -0.91
SCARNA20.1-201ENST00000516009 ADRA2BP18089 450 aa9.38□□□□□ -0.91
SCARNA20.1-201ENST00000516009 RFC4P35249 363 aa9.38□□□□□ -0.91
SCARNA20.1-201ENST00000516009 CTSWP56202 376 aa9.38□□□□□ -0.91
SCARNA20.1-201ENST00000516009 TXNRD1Q16881 649 aa9.38□□□□□ -0.91
SCARNA20.1-201ENST00000516009 TRAPPC3LQ5T215 181 aa9.38□□□□□ -0.91
SCARNA20.1-201ENST00000516009 NUTM1Q86Y26 1132 aa9.38□□□□□ -0.91
SCARNA20.1-201ENST00000516009 SYNE4Q8N205 404 aa9.38□□□□□ -0.91
SCARNA20.1-201ENST00000516009 GPATCH3Q96I76 525 aa9.38□□□□□ -0.91
SCARNA20.1-201ENST00000516009 UPF2Q9HAU5 1272 aaKnown RBP9.38□□□□□ -0.91
SCARNA20.1-201ENST00000516009 EYA2O00167 538 aa9.37□□□□□ -0.91
SCARNA20.1-201ENST00000516009 PLSCR1O15162 318 aa9.37□□□□□ -0.91
SCARNA20.1-201ENST00000516009 CDC45O75419 566 aa9.37□□□□□ -0.91
SCARNA20.1-201ENST00000516009 CIAO1O76071 339 aa9.37□□□□□ -0.91
SCARNA20.1-201ENST00000516009 NTSR2O95665 410 aa9.37□□□□□ -0.91
SCARNA20.1-201ENST00000516009 APBA3O96018 575 aa9.37□□□□□ -0.91
SCARNA20.1-201ENST00000516009 ANP32AP39687 249 aaKnown RBP9.37□□□□□ -0.91
SCARNA20.1-201ENST00000516009 IL15P40933 162 aaPredicted RBP9.37□□□□□ -0.91
SCARNA20.1-201ENST00000516009 IFIT5Q13325 482 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms