RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 GCC1Q96CN9 775 aa24.59■■□□□ 1.53
SSBP2-218ENST00000514493 RGL2O15211 777 aa24.58■■□□□ 1.53
SSBP2-218ENST00000514493 MTX1Q13505 466 aa24.58■■□□□ 1.53
SSBP2-218ENST00000514493 PNMA6EA0A0J9YXQ4 647 aa24.57■■□□□ 1.52
SSBP2-218ENST00000514493 H7C1W4 665 aa24.57■■□□□ 1.52
SSBP2-218ENST00000514493 KAZALD1Q96I82 304 aa24.57■■□□□ 1.52
SSBP2-218ENST00000514493 COL24A1Q17RW2 1714 aa24.57■■□□□ 1.52
SSBP2-218ENST00000514493 LAMB2P55268 1798 aa24.57■■□□□ 1.52
SSBP2-218ENST00000514493 PDZRN3Q9UPQ7 1066 aa24.57■■□□□ 1.52
SSBP2-218ENST00000514493 ZNF652Q9Y2D9 606 aa24.57■■□□□ 1.52
SSBP2-218ENST00000514493 NLRP10Q86W26 655 aa24.56■■□□□ 1.52
SSBP2-218ENST00000514493 ZNF34Q8IZ26 560 aa24.56■■□□□ 1.52
SSBP2-218ENST00000514493 DCTPP1Q9H773 170 aa24.56■■□□□ 1.52
SSBP2-218ENST00000514493 GPTP24298 496 aa24.55■■□□□ 1.52
SSBP2-218ENST00000514493 PPP1R42Q7Z4L9 355 aa24.55■■□□□ 1.52
SSBP2-218ENST00000514493 AMIGO3Q86WK7 504 aa24.55■■□□□ 1.52
SSBP2-218ENST00000514493 SSH3Q8TE77 659 aa24.55■■□□□ 1.52
SSBP2-218ENST00000514493 BICC1Q9H694 974 aaKnown RBP24.55■■□□□ 1.52
SSBP2-218ENST00000514493 UBN2Q6ZU65 1347 aa24.55■■□□□ 1.52
SSBP2-218ENST00000514493 ADRA2BP18089 450 aa24.54■■□□□ 1.52
SSBP2-218ENST00000514493 POLA2Q14181 598 aa24.54■■□□□ 1.52
SSBP2-218ENST00000514493 CLEC4GQ6UXB4 293 aa24.54■■□□□ 1.52
SSBP2-218ENST00000514493 NARFQ9UHQ1 456 aa24.54■■□□□ 1.52
SSBP2-218ENST00000514493 PCCAP05165 728 aaPredicted RBP24.54■■□□□ 1.52
SSBP2-218ENST00000514493 RGS3P49796 1198 aa24.54■■□□□ 1.52
SSBP2-218ENST00000514493 SRGAP3O43295 1099 aa24.53■■□□□ 1.52
SSBP2-218ENST00000514493 SMIM5Q71RC9 77 aa24.53■■□□□ 1.52
SSBP2-218ENST00000514493 JARID2Q92833 1246 aaPredicted RBP24.53■■□□□ 1.52
SSBP2-218ENST00000514493 ZBTB38Q8NAP3 1195 aaPredicted RBP24.52■■□□□ 1.52
SSBP2-218ENST00000514493 RABL6Q3YEC7 729 aaPredicted RBP24.52■■□□□ 1.52
SSBP2-218ENST00000514493 ARHGEF1Q92888 912 aaKnown RBP24.52■■□□□ 1.52
SSBP2-218ENST00000514493 DDX60Q8IY21 1712 aaKnown RBP24.51■■□□□ 1.51
SSBP2-218ENST00000514493 NUCB1Q02818 461 aa24.51■■□□□ 1.51
SSBP2-218ENST00000514493 PARP10Q53GL7 1025 aa24.51■■□□□ 1.51
SSBP2-218ENST00000514493 EPHA10Q5JZY3 1008 aa24.51■■□□□ 1.51
SSBP2-218ENST00000514493 CDHR2Q9BYE9 1310 aa24.5■■□□□ 1.51
SSBP2-218ENST00000514493 USP42Q9H9J4 1324 aaKnown RBP24.5■■□□□ 1.51
SSBP2-218ENST00000514493 PHF14O94880 888 aa24.5■■□□□ 1.51
SSBP2-218ENST00000514493 SSFA2P28290 1259 aa24.5■■□□□ 1.51
SSBP2-218ENST00000514493 TRAPPC3LQ5T215 181 aa24.5■■□□□ 1.51
SSBP2-218ENST00000514493 CASZ1Q86V15 1759 aa24.5■■□□□ 1.51
SSBP2-218ENST00000514493 ZPR1O75312 459 aa24.49■■□□□ 1.51
SSBP2-218ENST00000514493 USPL1Q5W0Q7 1092 aa24.49■■□□□ 1.51
SSBP2-218ENST00000514493 BCL2L12Q9HB09 334 aa24.49■■□□□ 1.51
SSBP2-218ENST00000514493 SRP68Q9UHB9 627 aaKnown RBP24.49■■□□□ 1.51
SSBP2-218ENST00000514493 RTL5Q5HYW3 569 aaPredicted RBP24.49■■□□□ 1.51
SSBP2-218ENST00000514493 NIP7Q9Y221 180 aaKnown RBP eCLIP24.49■■□□□ 1.51
SSBP2-218ENST00000514493 QSER1Q2KHR3 1735 aa24.48■■□□□ 1.51
SSBP2-218ENST00000514493 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.48■■□□□ 1.51
SSBP2-218ENST00000514493 FAM89AQ96GI7 184 aa24.48■■□□□ 1.51
SSBP2-218ENST00000514493 PLA2G12BQ9BX93 195 aa24.48■■□□□ 1.51
SSBP2-218ENST00000514493 RFC4P35249 363 aa24.47■■□□□ 1.51
SSBP2-218ENST00000514493 FOXO4P98177 505 aa24.47■■□□□ 1.51
SSBP2-218ENST00000514493 ANKRD45Q5TZF3 282 aa24.47■■□□□ 1.51
SSBP2-218ENST00000514493 CHD1LQ86WJ1 897 aa24.47■■□□□ 1.51
SSBP2-218ENST00000514493 AKT1S1Q96B36 256 aa24.47■■□□□ 1.51
SSBP2-218ENST00000514493 TRMT112Q9UI30 125 aaKnown RBP24.47■■□□□ 1.51
SSBP2-218ENST00000514493 EXOC6BQ9Y2D4 811 aa24.47■■□□□ 1.51
SSBP2-218ENST00000514493 SUSD4Q5VX71 490 aa24.46■■□□□ 1.51
SSBP2-218ENST00000514493 ZNF827Q17R98 1081 aa24.45■■□□□ 1.5
SSBP2-218ENST00000514493 ANO8Q9HCE9 1232 aaPredicted RBP24.45■■□□□ 1.5
SSBP2-218ENST00000514493 NTSR2O95665 410 aa24.44■■□□□ 1.5
SSBP2-218ENST00000514493 UTP14AQ9BVJ6 771 aaKnown RBP24.44■■□□□ 1.5
SSBP2-218ENST00000514493 LNPKQ9C0E8 428 aa24.44■■□□□ 1.5
SSBP2-218ENST00000514493 SH3TC1Q8TE82 1336 aa24.44■■□□□ 1.5
SSBP2-218ENST00000514493 TBC1D9BQ66K14 1250 aa24.44■■□□□ 1.5
SSBP2-218ENST00000514493 LMBR1LQ6UX01 489 aa24.44■■□□□ 1.5
SSBP2-218ENST00000514493 NOP58Q9Y2X3 529 aaKnown RBP24.43■■□□□ 1.5
SSBP2-218ENST00000514493 SURF6O75683 361 aaKnown RBP24.42■■□□□ 1.5
SSBP2-218ENST00000514493 PDE4AP27815 886 aa24.42■■□□□ 1.5
SSBP2-218ENST00000514493 IRS4O14654 1257 aaPredicted RBP24.42■■□□□ 1.5
SSBP2-218ENST00000514493 HSP90AB4PQ58FF6 505 aa24.42■■□□□ 1.5
SSBP2-218ENST00000514493 SYNE4Q8N205 404 aa24.42■■□□□ 1.5
SSBP2-218ENST00000514493 RAB11FIP3O75154 756 aa24.41■■□□□ 1.5
SSBP2-218ENST00000514493 RFX5P48382 616 aaPredicted RBP24.41■■□□□ 1.5
SSBP2-218ENST00000514493 ZBTB47Q9UFB7 747 aaPredicted RBP24.41■■□□□ 1.5
SSBP2-218ENST00000514493 APBB1O00213 710 aa24.4■■□□□ 1.5
SSBP2-218ENST00000514493 TFCP2L1Q9NZI6 479 aa24.4■■□□□ 1.5
SSBP2-218ENST00000514493 PA2G4Q9UQ80 394 aaKnown RBP24.4■■□□□ 1.5
SSBP2-218ENST00000514493 LRRCC1Q9C099 1032 aa24.39■■□□□ 1.5
SSBP2-218ENST00000514493 RBM19Q9Y4C8 960 aaKnown RBP24.39■■□□□ 1.5
SSBP2-218ENST00000514493 FAM177BA6PVY3 158 aa24.39■■□□□ 1.49
SSBP2-218ENST00000514493 PDE8AO60658 829 aa24.39■■□□□ 1.49
SSBP2-218ENST00000514493 CTSWP56202 376 aa24.39■■□□□ 1.49
SSBP2-218ENST00000514493 BICDL1Q6ZP65 573 aa24.39■■□□□ 1.49
SSBP2-218ENST00000514493 SETDB2Q96T68 719 aa24.39■■□□□ 1.49
SSBP2-218ENST00000514493 BACH2Q9BYV9 841 aa24.39■■□□□ 1.49
SSBP2-218ENST00000514493 COPRSQ9NQ92 184 aa24.39■■□□□ 1.49
SSBP2-218ENST00000514493 CHMP3Q9Y3E7 222 aa24.39■■□□□ 1.49
SSBP2-218ENST00000514493 CSF1RP07333 972 aa24.38■■□□□ 1.49
SSBP2-218ENST00000514493 CARMIL3Q8ND23 1372 aa24.38■■□□□ 1.49
SSBP2-218ENST00000514493 PSDA5PKW4 1024 aaPredicted RBP24.37■■□□□ 1.49
SSBP2-218ENST00000514493 SMARCA5O60264 1052 aaPredicted RBP24.37■■□□□ 1.49
SSBP2-218ENST00000514493 GYS1P13807 737 aa24.37■■□□□ 1.49
SSBP2-218ENST00000514493 HSP90B1P14625 803 aaKnown RBP24.37■■□□□ 1.49
SSBP2-218ENST00000514493 FAM161AQ3B820 660 aa24.37■■□□□ 1.49
SSBP2-218ENST00000514493 FLAD1Q8NFF5 587 aa24.37■■□□□ 1.49
SSBP2-218ENST00000514493 LRP5O75197 1615 aa24.37■■□□□ 1.49
SSBP2-218ENST00000514493 PTPN12Q05209 780 aaKnown RBP24.37■■□□□ 1.49
SSBP2-218ENST00000514493 ERC1Q8IUD2 1116 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 302.8 ms