RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 CDHR2Q9BYE9 1310 aa29.96■■■□□ 2.39
SPOCK3-221ENST00000512648 USP42Q9H9J4 1324 aaKnown RBP29.96■■■□□ 2.39
SPOCK3-221ENST00000512648 NLRP10Q86W26 655 aa29.95■■■□□ 2.39
SPOCK3-221ENST00000512648 ZNF34Q8IZ26 560 aa29.95■■■□□ 2.39
SPOCK3-221ENST00000512648 CDC45O75419 566 aa29.94■■■□□ 2.38
SPOCK3-221ENST00000512648 OS9Q13438 667 aaPredicted RBP29.94■■■□□ 2.38
SPOCK3-221ENST00000512648 ZNF772Q68DY9 489 aaPredicted RBP29.94■■■□□ 2.38
SPOCK3-221ENST00000512648 CLASRPQ8N2M8 674 aaKnown RBP29.94■■■□□ 2.38
SPOCK3-221ENST00000512648 PTPN12Q05209 780 aaKnown RBP29.93■■■□□ 2.38
SPOCK3-221ENST00000512648 LMBR1LQ6UX01 489 aa29.93■■■□□ 2.38
SPOCK3-221ENST00000512648 PA2G4Q9UQ80 394 aaKnown RBP29.93■■■□□ 2.38
SPOCK3-221ENST00000512648 JARID2Q92833 1246 aaPredicted RBP29.93■■■□□ 2.38
SPOCK3-221ENST00000512648 BCL11BQ9C0K0 894 aaPredicted RBP29.93■■■□□ 2.38
SPOCK3-221ENST00000512648 IL1RAPL2Q9NP60 686 aa29.93■■■□□ 2.38
SPOCK3-221ENST00000512648 COL5A3P25940 1745 aaPredicted RBP29.92■■■□□ 2.38
SPOCK3-221ENST00000512648 SASH1O94885 1247 aa29.92■■■□□ 2.38
SPOCK3-221ENST00000512648 IPO9Q96P70 1041 aaKnown RBP29.92■■■□□ 2.38
SPOCK3-221ENST00000512648 TBC1D2BQ9UPU7 963 aa29.92■■■□□ 2.38
SPOCK3-221ENST00000512648 TTC41PQ6P2S7 1318 aa29.91■■■□□ 2.38
SPOCK3-221ENST00000512648 CAMTA2O94983 1202 aa29.91■■■□□ 2.38
SPOCK3-221ENST00000512648 PTF1AQ7RTS3 328 aa29.91■■■□□ 2.38
SPOCK3-221ENST00000512648 LINC00116Q8NCU8 138 aa29.91■■■□□ 2.38
SPOCK3-221ENST00000512648 SDSP20132 328 aa29.9■■■□□ 2.38
SPOCK3-221ENST00000512648 FAM196AQ6ZSG2 479 aa29.9■■■□□ 2.38
SPOCK3-221ENST00000512648 ARXQ96QS3 562 aa29.9■■■□□ 2.38
SPOCK3-221ENST00000512648 CSF1RP07333 972 aa29.89■■■□□ 2.38
SPOCK3-221ENST00000512648 CLEC4GQ6UXB4 293 aa29.89■■■□□ 2.38
SPOCK3-221ENST00000512648 TBC1D9Q6ZT07 1266 aa29.89■■■□□ 2.38
SPOCK3-221ENST00000512648 AK7Q96M32 723 aa29.89■■■□□ 2.38
SPOCK3-221ENST00000512648 TBC1D32Q96NH3 1257 aa29.89■■■□□ 2.38
SPOCK3-221ENST00000512648 FBXO3Q9UK99 471 aa29.89■■■□□ 2.38
SPOCK3-221ENST00000512648 BTAF1O14981 1849 aa29.88■■■□□ 2.37
SPOCK3-221ENST00000512648 RBM6P78332 1123 aaKnown RBP29.87■■■□□ 2.37
SPOCK3-221ENST00000512648 PARP10Q53GL7 1025 aa29.87■■■□□ 2.37
SPOCK3-221ENST00000512648 DDRGK1Q96HY6 314 aa29.87■■■□□ 2.37
SPOCK3-221ENST00000512648 RPS6KA4O75676 772 aa29.86■■■□□ 2.37
SPOCK3-221ENST00000512648 KRT27Q7Z3Y8 459 aa29.86■■■□□ 2.37
SPOCK3-221ENST00000512648 ANKRD36CQ5JPF3 1778 aa29.85■■■□□ 2.37
SPOCK3-221ENST00000512648 FAM182BQ5T319 152 aa29.85■■■□□ 2.37
SPOCK3-221ENST00000512648 NUTM1Q86Y26 1132 aa29.85■■■□□ 2.37
SPOCK3-221ENST00000512648 PI4K2BQ8TCG2 481 aa29.85■■■□□ 2.37
SPOCK3-221ENST00000512648 MYH14Q7Z406 1995 aaKnown RBP29.84■■■□□ 2.37
SPOCK3-221ENST00000512648 FAM89AQ96GI7 184 aa29.84■■■□□ 2.37
SPOCK3-221ENST00000512648 ZNF652Q9Y2D9 606 aa29.84■■■□□ 2.37
SPOCK3-221ENST00000512648 SBF2Q86WG5 1849 aa29.83■■■□□ 2.37
SPOCK3-221ENST00000512648 CIAO1O76071 339 aa29.83■■■□□ 2.37
SPOCK3-221ENST00000512648 HMGB2P26583 209 aaKnown RBP29.83■■■□□ 2.37
SPOCK3-221ENST00000512648 CASC1Q6TDU7 716 aa29.83■■■□□ 2.37
SPOCK3-221ENST00000512648 CCNL1Q9UK58 526 aaPredicted RBP29.83■■■□□ 2.37
SPOCK3-221ENST00000512648 ERC2O15083 957 aa29.82■■■□□ 2.36
SPOCK3-221ENST00000512648 GLRX3O76003 335 aaKnown RBP29.82■■■□□ 2.36
SPOCK3-221ENST00000512648 IFIT2P09913 472 aaKnown RBP29.82■■■□□ 2.36
SPOCK3-221ENST00000512648 GPTP24298 496 aa29.82■■■□□ 2.36
SPOCK3-221ENST00000512648 KLHDC4Q8TBB5 520 aa29.82■■■□□ 2.36
SPOCK3-221ENST00000512648 GPATCH3Q96I76 525 aa29.82■■■□□ 2.36
SPOCK3-221ENST00000512648 GPR108Q9NPR9 543 aa29.82■■■□□ 2.36
SPOCK3-221ENST00000512648 NUP98P52948 1817 aa29.82■■■□□ 2.36
SPOCK3-221ENST00000512648 UBN2Q6ZU65 1347 aa29.82■■■□□ 2.36
SPOCK3-221ENST00000512648 ECHDC1Q9NTX5 307 aa29.81■■■□□ 2.36
SPOCK3-221ENST00000512648 TRMT112Q9UI30 125 aaKnown RBP29.81■■■□□ 2.36
SPOCK3-221ENST00000512648 LY75O60449 1722 aa29.81■■■□□ 2.36
SPOCK3-221ENST00000512648 HSP90B1P14625 803 aaKnown RBP29.8■■■□□ 2.36
SPOCK3-221ENST00000512648 IL15P40933 162 aaPredicted RBP29.8■■■□□ 2.36
SPOCK3-221ENST00000512648 EAF2Q96CJ1 260 aaPredicted RBP29.8■■■□□ 2.36
SPOCK3-221ENST00000512648 BCL11AQ9H165 835 aa29.8■■■□□ 2.36
SPOCK3-221ENST00000512648 PDE8AO60658 829 aa29.8■■■□□ 2.36
SPOCK3-221ENST00000512648 RTL5Q5HYW3 569 aaPredicted RBP29.8■■■□□ 2.36
SPOCK3-221ENST00000512648 C22orf23Q9BZE7 217 aa29.8■■■□□ 2.36
SPOCK3-221ENST00000512648 SIL1Q9H173 461 aa29.8■■■□□ 2.36
SPOCK3-221ENST00000512648 EYA2O00167 538 aa29.79■■■□□ 2.36
SPOCK3-221ENST00000512648 IRS4O14654 1257 aaPredicted RBP29.79■■■□□ 2.36
SPOCK3-221ENST00000512648 RBM25P49756 843 aaKnown RBP29.79■■■□□ 2.36
SPOCK3-221ENST00000512648 MFAP1P55081 439 aaKnown RBP29.79■■■□□ 2.36
SPOCK3-221ENST00000512648 AACSQ86V21 672 aa29.79■■■□□ 2.36
SPOCK3-221ENST00000512648 CCDC57Q2TAC2 916 aa29.78■■■□□ 2.36
SPOCK3-221ENST00000512648 ATG9AQ7Z3C6 839 aa29.78■■■□□ 2.36
SPOCK3-221ENST00000512648 TTLL11Q8NHH1 800 aa29.78■■■□□ 2.36
SPOCK3-221ENST00000512648 UTP14AQ9BVJ6 771 aaKnown RBP29.78■■■□□ 2.36
SPOCK3-221ENST00000512648 SUSD4Q5VX71 490 aa29.77■■■□□ 2.36
SPOCK3-221ENST00000512648 CHMP3Q9Y3E7 222 aa29.77■■■□□ 2.36
SPOCK3-221ENST00000512648 TSHZ3Q63HK5 1081 aa29.76■■■□□ 2.35
SPOCK3-221ENST00000512648 NARFQ9UHQ1 456 aa29.76■■■□□ 2.35
SPOCK3-221ENST00000512648 SH3TC1Q8TE82 1336 aa29.76■■■□□ 2.35
SPOCK3-221ENST00000512648 CTSWP56202 376 aa29.75■■■□□ 2.35
SPOCK3-221ENST00000512648 SLC27A3Q5K4L6 730 aa29.75■■■□□ 2.35
SPOCK3-221ENST00000512648 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.75■■■□□ 2.35
SPOCK3-221ENST00000512648 TFCP2Q12800 502 aa29.74■■■□□ 2.35
SPOCK3-221ENST00000512648 IFIT5Q13325 482 aaKnown RBP29.74■■■□□ 2.35
SPOCK3-221ENST00000512648 TNNI3KQ59H18 835 aa29.74■■■□□ 2.35
SPOCK3-221ENST00000512648 FPGT-TNNI3KV9GXZ4 949 aa29.74■■■□□ 2.35
SPOCK3-221ENST00000512648 TUBGCP6Q96RT7 1819 aa29.74■■■□□ 2.35
SPOCK3-221ENST00000512648 NIP7Q9Y221 180 aaKnown RBP eCLIP29.74■■■□□ 2.35
SPOCK3-221ENST00000512648 RTCBQ9Y3I0 505 aaKnown RBP29.74■■■□□ 2.35
SPOCK3-221ENST00000512648 BCORQ6W2J9 1755 aa29.72■■■□□ 2.35
SPOCK3-221ENST00000512648 NTSR2O95665 410 aa29.72■■■□□ 2.35
SPOCK3-221ENST00000512648 KCNQ4P56696 695 aa29.72■■■□□ 2.35
SPOCK3-221ENST00000512648 CNTROBQ8N137 903 aa29.72■■■□□ 2.35
SPOCK3-221ENST00000512648 SYNE4Q8N205 404 aa29.72■■■□□ 2.35
SPOCK3-221ENST00000512648 TRIM6-TRIM34B2RNG4 842 aa29.71■■■□□ 2.35
SPOCK3-221ENST00000512648 MSH5O43196 834 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms