RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CCNL1Q9UK58 526 aaPredicted RBP18.77■□□□□ 0.6
SCLT1-209ENST00000511426 SLC27A3Q5K4L6 730 aa18.76■□□□□ 0.59
SCLT1-209ENST00000511426 NLRP10Q86W26 655 aa18.76■□□□□ 0.59
SCLT1-209ENST00000511426 LINC00116Q8NCU8 138 aa18.76■□□□□ 0.59
SCLT1-209ENST00000511426 SALL3Q9BXA9 1300 aa18.76■□□□□ 0.59
SCLT1-209ENST00000511426 ZNF34Q8IZ26 560 aa18.76■□□□□ 0.59
SCLT1-209ENST00000511426 BCORQ6W2J9 1755 aa18.75■□□□□ 0.59
SCLT1-209ENST00000511426 RPS6KA4O75676 772 aa18.75■□□□□ 0.59
SCLT1-209ENST00000511426 CAMTA2O94983 1202 aa18.75■□□□□ 0.59
SCLT1-209ENST00000511426 STAP2Q9UGK3 403 aa18.75■□□□□ 0.59
SCLT1-209ENST00000511426 FBXO3Q9UK99 471 aa18.75■□□□□ 0.59
SCLT1-209ENST00000511426 RXRBP28702 533 aa18.74■□□□□ 0.59
SCLT1-209ENST00000511426 FOXO4P98177 505 aa18.74■□□□□ 0.59
SCLT1-209ENST00000511426 G3BP1Q13283 466 aaKnown RBP eCLIP18.74■□□□□ 0.59
SCLT1-209ENST00000511426 HLFQ16534 295 aa18.74■□□□□ 0.59
SCLT1-209ENST00000511426 TTC22Q5TAA0 569 aa18.74■□□□□ 0.59
SCLT1-209ENST00000511426 ARXQ96QS3 562 aa18.74■□□□□ 0.59
SCLT1-209ENST00000511426 MYH14Q7Z406 1995 aaKnown RBP18.74■□□□□ 0.59
SCLT1-209ENST00000511426 NUP98P52948 1817 aa18.74■□□□□ 0.59
SCLT1-209ENST00000511426 BRWD3Q6RI45 1802 aa18.74■□□□□ 0.59
SCLT1-209ENST00000511426 OS9Q13438 667 aaPredicted RBP18.73■□□□□ 0.59
SCLT1-209ENST00000511426 EPHA10Q5JZY3 1008 aa18.73■□□□□ 0.59
SCLT1-209ENST00000511426 CLASRPQ8N2M8 674 aaKnown RBP18.73■□□□□ 0.59
SCLT1-209ENST00000511426 TBC1D2BQ9UPU7 963 aa18.73■□□□□ 0.59
SCLT1-209ENST00000511426 MX1P20591 662 aa18.73■□□□□ 0.59
SCLT1-209ENST00000511426 PDE1AP54750 535 aa18.73■□□□□ 0.59
SCLT1-209ENST00000511426 SCN7AQ01118 1682 aa18.72■□□□□ 0.59
SCLT1-209ENST00000511426 APBB1O00213 710 aa18.72■□□□□ 0.59
SCLT1-209ENST00000511426 SMARCA5O60264 1052 aaPredicted RBP18.72■□□□□ 0.59
SCLT1-209ENST00000511426 ADRA2BP18089 450 aa18.72■□□□□ 0.59
SCLT1-209ENST00000511426 RFX5P48382 616 aaPredicted RBP18.72■□□□□ 0.59
SCLT1-209ENST00000511426 FAM182BQ5T319 152 aa18.72■□□□□ 0.59
SCLT1-209ENST00000511426 LMBR1LQ6UX01 489 aa18.72■□□□□ 0.59
SCLT1-209ENST00000511426 PTF1AQ7RTS3 328 aa18.72■□□□□ 0.59
SCLT1-209ENST00000511426 UPF2Q9HAU5 1272 aaKnown RBP18.72■□□□□ 0.59
SCLT1-209ENST00000511426 USP42Q9H9J4 1324 aaKnown RBP18.71■□□□□ 0.59
SCLT1-209ENST00000511426 RTCBQ9Y3I0 505 aaKnown RBP18.71■□□□□ 0.59
SCLT1-209ENST00000511426 TAF1LQ8IZX4 1826 aa18.71■□□□□ 0.59
SCLT1-209ENST00000511426 TTC41PQ6P2S7 1318 aa18.71■□□□□ 0.59
SCLT1-209ENST00000511426 CSF1RP07333 972 aa18.7■□□□□ 0.58
SCLT1-209ENST00000511426 PTPN12Q05209 780 aaKnown RBP18.7■□□□□ 0.58
SCLT1-209ENST00000511426 GPATCH3Q96I76 525 aa18.7■□□□□ 0.58
SCLT1-209ENST00000511426 C4BP0C0L5 1744 aa18.7■□□□□ 0.58
SCLT1-209ENST00000511426 C16orf71Q8IYS4 520 aaPredicted RBP18.69■□□□□ 0.58
SCLT1-209ENST00000511426 CIAO1O76071 339 aa18.69■□□□□ 0.58
SCLT1-209ENST00000511426 NARFQ9UHQ1 456 aa18.69■□□□□ 0.58
SCLT1-209ENST00000511426 TRMT112Q9UI30 125 aaKnown RBP18.69■□□□□ 0.58
SCLT1-209ENST00000511426 UBN2Q6ZU65 1347 aa18.69■□□□□ 0.58
SCLT1-209ENST00000511426 SH3TC1Q8TE82 1336 aa18.69■□□□□ 0.58
SCLT1-209ENST00000511426 PDE8AO60658 829 aa18.68■□□□□ 0.58
SCLT1-209ENST00000511426 GSPT1P15170 499 aaKnown RBP18.68■□□□□ 0.58
SCLT1-209ENST00000511426 GPTP24298 496 aa18.68■□□□□ 0.58
SCLT1-209ENST00000511426 ANP32AP39687 249 aaKnown RBP18.68■□□□□ 0.58
SCLT1-209ENST00000511426 UTP14AQ9BVJ6 771 aaKnown RBP18.68■□□□□ 0.58
SCLT1-209ENST00000511426 PA2G4Q9UQ80 394 aaKnown RBP18.68■□□□□ 0.58
SCLT1-209ENST00000511426 PLSCR1O15162 318 aa18.67■□□□□ 0.58
SCLT1-209ENST00000511426 GNPATO15228 680 aa18.67■□□□□ 0.58
SCLT1-209ENST00000511426 CDC45O75419 566 aa18.67■□□□□ 0.58
SCLT1-209ENST00000511426 CCDC57Q2TAC2 916 aa18.67■□□□□ 0.58
SCLT1-209ENST00000511426 CASC1Q6TDU7 716 aa18.67■□□□□ 0.58
SCLT1-209ENST00000511426 FAM89AQ96GI7 184 aa18.67■□□□□ 0.58
SCLT1-209ENST00000511426 GPR108Q9NPR9 543 aa18.67■□□□□ 0.58
SCLT1-209ENST00000511426 ERC2O15083 957 aa18.66■□□□□ 0.58
SCLT1-209ENST00000511426 IL15P40933 162 aaPredicted RBP18.66■□□□□ 0.58
SCLT1-209ENST00000511426 OTUD7AQ8TE49 926 aaPredicted RBP18.66■□□□□ 0.58
SCLT1-209ENST00000511426 IL1RAPL2Q9NP60 686 aa18.66■□□□□ 0.58
SCLT1-209ENST00000511426 IRS4O14654 1257 aaPredicted RBP18.66■□□□□ 0.58
SCLT1-209ENST00000511426 SASH1O94885 1247 aa18.66■□□□□ 0.58
SCLT1-209ENST00000511426 CTSWP56202 376 aa18.66■□□□□ 0.58
SCLT1-209ENST00000511426 NIP7Q9Y221 180 aaKnown RBP eCLIP18.66■□□□□ 0.58
SCLT1-209ENST00000511426 TRIM37O94972 964 aa18.65■□□□□ 0.58
SCLT1-209ENST00000511426 IFIT2P09913 472 aaKnown RBP18.65■□□□□ 0.58
SCLT1-209ENST00000511426 JARID2Q92833 1246 aaPredicted RBP18.65■□□□□ 0.58
SCLT1-209ENST00000511426 RTL9Q8NET4 1388 aa18.65■□□□□ 0.58
SCLT1-209ENST00000511426 RGPD3A6NKT7 1758 aaPredicted RBP18.65■□□□□ 0.58
SCLT1-209ENST00000511426 LAMB2P55268 1798 aa18.65■□□□□ 0.58
SCLT1-209ENST00000511426 RGPD4Q7Z3J3 1758 aa18.65■□□□□ 0.58
SCLT1-209ENST00000511426 ZPR1O75312 459 aa18.64■□□□□ 0.57
SCLT1-209ENST00000511426 GLRX3O76003 335 aaKnown RBP18.64■□□□□ 0.57
SCLT1-209ENST00000511426 IFIT5Q13325 482 aaKnown RBP18.64■□□□□ 0.57
SCLT1-209ENST00000511426 NYXQ9GZU5 481 aa18.64■□□□□ 0.57
SCLT1-209ENST00000511426 CHMP3Q9Y3E7 222 aa18.64■□□□□ 0.57
SCLT1-209ENST00000511426 EYA2O00167 538 aa18.63■□□□□ 0.57
SCLT1-209ENST00000511426 NTSR2O95665 410 aa18.63■□□□□ 0.57
SCLT1-209ENST00000511426 SSFA2P28290 1259 aa18.63■□□□□ 0.57
SCLT1-209ENST00000511426 SUSD4Q5VX71 490 aa18.63■□□□□ 0.57
SCLT1-209ENST00000511426 SDSP20132 328 aa18.63■□□□□ 0.57
SCLT1-209ENST00000511426 RTL5Q5HYW3 569 aaPredicted RBP18.63■□□□□ 0.57
SCLT1-209ENST00000511426 TRAPPC3LQ5T215 181 aa18.63■□□□□ 0.57
SCLT1-209ENST00000511426 TTLL11Q8NHH1 800 aa18.63■□□□□ 0.57
SCLT1-209ENST00000511426 ECHDC1Q9NTX5 307 aa18.63■□□□□ 0.57
SCLT1-209ENST00000511426 MYH3P11055 1940 aa18.62■□□□□ 0.57
SCLT1-209ENST00000511426 SIL1Q9H173 461 aa18.62■□□□□ 0.57
SCLT1-209ENST00000511426 COL24A1Q17RW2 1714 aa18.62■□□□□ 0.57
SCLT1-209ENST00000511426 ANKRD18BA2A2Z9 1011 aa18.61■□□□□ 0.57
SCLT1-209ENST00000511426 TBC1D9Q6ZT07 1266 aa18.61■□□□□ 0.57
SCLT1-209ENST00000511426 AACSQ86V21 672 aa18.61■□□□□ 0.57
SCLT1-209ENST00000511426 PI4K2BQ8TCG2 481 aa18.61■□□□□ 0.57
SCLT1-209ENST00000511426 LRRC4BQ9NT99 713 aa18.61■□□□□ 0.57
SCLT1-209ENST00000511426 LRP5O75197 1615 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms