RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 CNKSR1Q969H4 720 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 GBP4Q96PP9 640 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 PDZRN3Q9UPQ7 1066 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 EXOC6BQ9Y2D4 811 aa6.14□□□□□ -1.43
PHF3-210ENST00000509876 CCDC69A6NI79 296 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 EIF4A1P60842 406 aaKnown RBP6.13□□□□□ -1.43
PHF3-210ENST00000509876 JARID2Q92833 1246 aaPredicted RBP6.13□□□□□ -1.43
PHF3-210ENST00000509876 GJA3Q9Y6H8 435 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 SSH2Q76I76 1423 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 MAP4K4O95819 1239 aaPredicted RBP6.13□□□□□ -1.43
PHF3-210ENST00000509876 TRIM27P14373 513 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 MX1P20591 662 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 SLC4A3P48751 1232 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 ATP2B3Q16720 1220 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 NIM1KQ8IY84 436 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 PPLO60437 1756 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 CHL1O00533 1208 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 TNNI2P48788 182 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 ATP6V1DQ9Y5K8 247 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 RIMBP2O15034 1052 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 UFL1O94874 794 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 LARGE2Q8N3Y3 721 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 UBAC1Q9BSL1 405 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 SPATA31A5Q5VU36 1347 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 SPATA31A7Q8IWB4 1347 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 IMMTQ16891 758 aaKnown RBP6.13□□□□□ -1.43
PHF3-210ENST00000509876 CCDC125Q86Z20 511 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 MKNK2Q9HBH9 465 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 CABP5Q9NP86 173 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 PNPLA6Q8IY17 1366 aa6.13□□□□□ -1.43
PHF3-210ENST00000509876 IL6STP40189 918 aaPredicted RBP6.13□□□□□ -1.43
PHF3-210ENST00000509876 UBR1Q8IWV7 1749 aa6.12□□□□□ -1.43
PHF3-210ENST00000509876 MCTP1Q6DN14 999 aa6.12□□□□□ -1.43
PHF3-210ENST00000509876 MROH1Q8NDA8 1641 aa6.12□□□□□ -1.43
PHF3-210ENST00000509876 USPL1Q5W0Q7 1092 aa6.12□□□□□ -1.43
PHF3-210ENST00000509876 DPY19L2Q6NUT2 758 aa6.12□□□□□ -1.43
PHF3-210ENST00000509876 ARHGAP27Q6ZUM4 889 aa6.12□□□□□ -1.43
PHF3-210ENST00000509876 PPP4R3BQ5MIZ7 849 aa6.12□□□□□ -1.43
PHF3-210ENST00000509876 CRNKL1Q9BZJ0 848 aaKnown RBP6.12□□□□□ -1.43
PHF3-210ENST00000509876 ASAP1Q9ULH1 1129 aa6.12□□□□□ -1.43
PHF3-210ENST00000509876 MAST3O60307 1309 aa6.12□□□□□ -1.43
PHF3-210ENST00000509876 MED14O60244 1454 aa6.12□□□□□ -1.43
PHF3-210ENST00000509876 CCDC8Q9H0W5 538 aaPredicted RBP6.12□□□□□ -1.43
PHF3-210ENST00000509876 LRRC7Q96NW7 1537 aa6.12□□□□□ -1.43
PHF3-210ENST00000509876 KIF1AQ12756 1690 aa6.12□□□□□ -1.43
PHF3-210ENST00000509876 STK11IPQ8N1F8 1099 aa6.12□□□□□ -1.43
PHF3-210ENST00000509876 VAMP4O75379 141 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 PLCG2P16885 1265 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 ITSN1Q15811 1721 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 VSIG10Q8N0Z9 540 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 NAPBQ9H115 298 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 ZNF444Q8N0Y2 327 aaPredicted RBP6.11□□□□□ -1.43
PHF3-210ENST00000509876 IL17REQ8NFR9 667 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 RNF41Q9H4P4 317 aaPredicted RBP6.11□□□□□ -1.43
PHF3-210ENST00000509876 MAP3K15Q6ZN16 1313 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 ADRA2BP18089 450 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 TPM4P67936 248 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 KRT32Q14532 448 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 CWF19L2Q2TBE0 894 aaKnown RBP6.11□□□□□ -1.43
PHF3-210ENST00000509876 MPNDQ8N594 471 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 PIGBQ92521 554 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 SYAP1Q96A49 352 aaPredicted RBP6.11□□□□□ -1.43
PHF3-210ENST00000509876 HOOK2Q96ED9 719 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 BOLA2Q9H3K6 86 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 PHAXQ9H814 394 aaKnown RBP6.11□□□□□ -1.43
PHF3-210ENST00000509876 ATF5Q9Y2D1 282 aaPredicted RBP6.11□□□□□ -1.43
PHF3-210ENST00000509876 USP19O94966 1318 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 ITGA6P23229 1130 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 EN1Q05925 392 aaPredicted RBP6.11□□□□□ -1.43
PHF3-210ENST00000509876 CCDC47Q96A33 483 aaKnown RBP6.11□□□□□ -1.43
PHF3-210ENST00000509876 FAM89AQ96GI7 184 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 GIGYF1O75420 1035 aaPredicted RBP6.11□□□□□ -1.43
PHF3-210ENST00000509876 HCLS1P14317 486 aaPredicted RBP6.11□□□□□ -1.43
PHF3-210ENST00000509876 TCIRG1Q13488 830 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 ANKRD1Q15327 319 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 TMC4Q7Z404 712 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 F8W031 263 aaPredicted RBP6.11□□□□□ -1.43
PHF3-210ENST00000509876 NRDCO43847 1150 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 RBM26Q5T8P6 1007 aaKnown RBP6.11□□□□□ -1.43
PHF3-210ENST00000509876 VEZTQ9HBM0 779 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 DENND2AQ9ULE3 1009 aa6.11□□□□□ -1.43
PHF3-210ENST00000509876 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.1□□□□□ -1.43
PHF3-210ENST00000509876 AXIN2Q9Y2T1 843 aa6.1□□□□□ -1.43
PHF3-210ENST00000509876 EVI5LQ96CN4 794 aa6.1□□□□□ -1.43
PHF3-210ENST00000509876 FEZ1Q99689 392 aa6.1□□□□□ -1.43
PHF3-210ENST00000509876 ECHDC1Q9NTX5 307 aa6.1□□□□□ -1.43
PHF3-210ENST00000509876 MINDY4BA8MYZ0 360 aa6.1□□□□□ -1.43
PHF3-210ENST00000509876 TRIM22Q8IYM9 498 aa6.1□□□□□ -1.43
PHF3-210ENST00000509876 PPIP5K2O43314 1243 aa6.1□□□□□ -1.43
PHF3-210ENST00000509876 SERPINB2P05120 415 aa6.1□□□□□ -1.43
PHF3-210ENST00000509876 ATP8B2P98198 1209 aa6.1□□□□□ -1.43
PHF3-210ENST00000509876 PDE4BQ07343 736 aa6.1□□□□□ -1.43
PHF3-210ENST00000509876 CWC27Q6UX04 472 aaKnown RBP6.1□□□□□ -1.43
PHF3-210ENST00000509876 TSPYL6Q8N831 410 aa6.1□□□□□ -1.43
PHF3-210ENST00000509876 TRIM35Q9UPQ4 493 aa6.1□□□□□ -1.43
PHF3-210ENST00000509876 HEG1Q9ULI3 1381 aa6.1□□□□□ -1.43
PHF3-210ENST00000509876 MROH5Q6ZUA9 1318 aa6.1□□□□□ -1.43
PHF3-210ENST00000509876 KRT24Q2M2I5 525 aa6.1□□□□□ -1.43
PHF3-210ENST00000509876 DALRD3Q5D0E6 543 aaKnown RBP6.1□□□□□ -1.43
PHF3-210ENST00000509876 SMC3Q9UQE7 1217 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms