RNA–Protein interactions for RNA: ENST00000508828.1

SPSB4-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 3

Gene SPSB4, Length 537 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-204ENST00000508828 CNTNAP4Q9C0A0 1308 aa16.29■□□□□ 0.2
SPSB4-204ENST00000508828 EIF5BO60841 1220 aaKnown RBP16.29■□□□□ 0.2
SPSB4-204ENST00000508828 EPHA10Q5JZY3 1008 aa16.29■□□□□ 0.2
SPSB4-204ENST00000508828 OTUD7AQ8TE49 926 aaPredicted RBP16.29■□□□□ 0.2
SPSB4-204ENST00000508828 LY75O60449 1722 aa16.28■□□□□ 0.2
SPSB4-204ENST00000508828 SALL3Q9BXA9 1300 aa16.28■□□□□ 0.2
SPSB4-204ENST00000508828 CDC45O75419 566 aa16.28■□□□□ 0.2
SPSB4-204ENST00000508828 PCCAP05165 728 aaPredicted RBP16.28■□□□□ 0.2
SPSB4-204ENST00000508828 PDE1AP54750 535 aa16.28■□□□□ 0.2
SPSB4-204ENST00000508828 JARID2Q92833 1246 aaPredicted RBP16.28■□□□□ 0.2
SPSB4-204ENST00000508828 IL1RAPL2Q9NP60 686 aa16.28■□□□□ 0.2
SPSB4-204ENST00000508828 BCORQ6W2J9 1755 aa16.28■□□□□ 0.2
SPSB4-204ENST00000508828 MYH14Q7Z406 1995 aaKnown RBP16.27■□□□□ 0.2
SPSB4-204ENST00000508828 GSPT1P15170 499 aaKnown RBP16.27■□□□□ 0.2
SPSB4-204ENST00000508828 MX1P20591 662 aa16.27■□□□□ 0.2
SPSB4-204ENST00000508828 HLFQ16534 295 aa16.27■□□□□ 0.2
SPSB4-204ENST00000508828 CLASRPQ8N2M8 674 aaKnown RBP16.27■□□□□ 0.2
SPSB4-204ENST00000508828 COPRSQ9NQ92 184 aa16.27■□□□□ 0.2
SPSB4-204ENST00000508828 STAP2Q9UGK3 403 aa16.27■□□□□ 0.2
SPSB4-204ENST00000508828 TBC1D2BQ9UPU7 963 aa16.27■□□□□ 0.2
SPSB4-204ENST00000508828 PA2G4Q9UQ80 394 aaKnown RBP16.27■□□□□ 0.2
SPSB4-204ENST00000508828 CDHR2Q9BYE9 1310 aa16.26■□□□□ 0.19
SPSB4-204ENST00000508828 FAM182BQ5T319 152 aa16.26■□□□□ 0.19
SPSB4-204ENST00000508828 NLRP10Q86W26 655 aa16.26■□□□□ 0.19
SPSB4-204ENST00000508828 ZBTB38Q8NAP3 1195 aaPredicted RBP16.26■□□□□ 0.19
SPSB4-204ENST00000508828 LINC00116Q8NCU8 138 aa16.26■□□□□ 0.19
SPSB4-204ENST00000508828 PLA2G12BQ9BX93 195 aa16.26■□□□□ 0.19
SPSB4-204ENST00000508828 BRWD3Q6RI45 1802 aa16.25■□□□□ 0.19
SPSB4-204ENST00000508828 GPTP24298 496 aa16.25■□□□□ 0.19
SPSB4-204ENST00000508828 RFX5P48382 616 aaPredicted RBP16.25■□□□□ 0.19
SPSB4-204ENST00000508828 FOXO4P98177 505 aa16.25■□□□□ 0.19
SPSB4-204ENST00000508828 RC3H1Q5TC82 1133 aaKnown RBP16.25■□□□□ 0.19
SPSB4-204ENST00000508828 LMBR1LQ6UX01 489 aa16.25■□□□□ 0.19
SPSB4-204ENST00000508828 FAM196AQ6ZSG2 479 aa16.25■□□□□ 0.19
SPSB4-204ENST00000508828 KRT27Q7Z3Y8 459 aa16.25■□□□□ 0.19
SPSB4-204ENST00000508828 BCL11BQ9C0K0 894 aaPredicted RBP16.25■□□□□ 0.19
SPSB4-204ENST00000508828 CCNL1Q9UK58 526 aaPredicted RBP16.25■□□□□ 0.19
SPSB4-204ENST00000508828 ZNF652Q9Y2D9 606 aa16.25■□□□□ 0.19
SPSB4-204ENST00000508828 CHMP3Q9Y3E7 222 aa16.25■□□□□ 0.19
SPSB4-204ENST00000508828 CAMTA2O94983 1202 aa16.24■□□□□ 0.19
SPSB4-204ENST00000508828 RTL5Q5HYW3 569 aaPredicted RBP16.24■□□□□ 0.19
SPSB4-204ENST00000508828 PTF1AQ7RTS3 328 aa16.24■□□□□ 0.19
SPSB4-204ENST00000508828 DDRGK1Q96HY6 314 aa16.24■□□□□ 0.19
SPSB4-204ENST00000508828 GPATCH3Q96I76 525 aa16.24■□□□□ 0.19
SPSB4-204ENST00000508828 SCN7AQ01118 1682 aa16.24■□□□□ 0.19
SPSB4-204ENST00000508828 TUBGCP6Q96RT7 1819 aa16.24■□□□□ 0.19
SPSB4-204ENST00000508828 RGL2O15211 777 aa16.23■□□□□ 0.19
SPSB4-204ENST00000508828 SEC24BO95487 1268 aa16.23■□□□□ 0.19
SPSB4-204ENST00000508828 PTPN12Q05209 780 aaKnown RBP16.23■□□□□ 0.19
SPSB4-204ENST00000508828 PARP10Q53GL7 1025 aa16.23■□□□□ 0.19
SPSB4-204ENST00000508828 CASC1Q6TDU7 716 aa16.23■□□□□ 0.19
SPSB4-204ENST00000508828 NUTM1Q86Y26 1132 aa16.23■□□□□ 0.19
SPSB4-204ENST00000508828 ZNF34Q8IZ26 560 aa16.23■□□□□ 0.19
SPSB4-204ENST00000508828 TAF1LQ8IZX4 1826 aa16.23■□□□□ 0.19
SPSB4-204ENST00000508828 TTC41PQ6P2S7 1318 aa16.22■□□□□ 0.19
SPSB4-204ENST00000508828 USP42Q9H9J4 1324 aaKnown RBP16.22■□□□□ 0.19
SPSB4-204ENST00000508828 IFIT2P09913 472 aaKnown RBP16.22■□□□□ 0.19
SPSB4-204ENST00000508828 SDSP20132 328 aa16.22■□□□□ 0.19
SPSB4-204ENST00000508828 MFAP1P55081 439 aaKnown RBP16.22■□□□□ 0.19
SPSB4-204ENST00000508828 CCDC125Q86Z20 511 aa16.22■□□□□ 0.19
SPSB4-204ENST00000508828 SIL1Q9H173 461 aa16.22■□□□□ 0.19
SPSB4-204ENST00000508828 SASH1O94885 1247 aa16.21■□□□□ 0.19
SPSB4-204ENST00000508828 TBC1D9Q6ZT07 1266 aa16.21■□□□□ 0.19
SPSB4-204ENST00000508828 FAM89AQ96GI7 184 aa16.21■□□□□ 0.19
SPSB4-204ENST00000508828 TRMT112Q9UI30 125 aaKnown RBP16.21■□□□□ 0.19
SPSB4-204ENST00000508828 MYH3P11055 1940 aa16.21■□□□□ 0.19
SPSB4-204ENST00000508828 UBN2Q6ZU65 1347 aa16.2■□□□□ 0.18
SPSB4-204ENST00000508828 ERC2O15083 957 aa16.2■□□□□ 0.18
SPSB4-204ENST00000508828 RPS6KA4O75676 772 aa16.2■□□□□ 0.18
SPSB4-204ENST00000508828 HSP90B1P14625 803 aaKnown RBP16.2■□□□□ 0.18
SPSB4-204ENST00000508828 CLEC4GQ6UXB4 293 aa16.2■□□□□ 0.18
SPSB4-204ENST00000508828 AACSQ86V21 672 aa16.2■□□□□ 0.18
SPSB4-204ENST00000508828 KLHDC4Q8TBB5 520 aa16.2■□□□□ 0.18
SPSB4-204ENST00000508828 IPO9Q96P70 1041 aaKnown RBP16.2■□□□□ 0.18
SPSB4-204ENST00000508828 C4BP0C0L5 1744 aa16.19■□□□□ 0.18
SPSB4-204ENST00000508828 LAMB2P55268 1798 aa16.19■□□□□ 0.18
SPSB4-204ENST00000508828 IRS4O14654 1257 aaPredicted RBP16.19■□□□□ 0.18
SPSB4-204ENST00000508828 PDE8AO60658 829 aa16.19■□□□□ 0.18
SPSB4-204ENST00000508828 GLRX3O76003 335 aaKnown RBP16.19■□□□□ 0.18
SPSB4-204ENST00000508828 HMGB2P26583 209 aaKnown RBP16.19■□□□□ 0.18
SPSB4-204ENST00000508828 CCDC57Q2TAC2 916 aa16.19■□□□□ 0.18
SPSB4-204ENST00000508828 TSHZ3Q63HK5 1081 aa16.19■□□□□ 0.18
SPSB4-204ENST00000508828 AK7Q96M32 723 aa16.19■□□□□ 0.18
SPSB4-204ENST00000508828 TBC1D32Q96NH3 1257 aa16.19■□□□□ 0.18
SPSB4-204ENST00000508828 FBXO3Q9UK99 471 aa16.19■□□□□ 0.18
SPSB4-204ENST00000508828 SH3TC1Q8TE82 1336 aa16.19■□□□□ 0.18
SPSB4-204ENST00000508828 SRCAPQ6ZRS2 3230 aa16.18■□□□□ 0.18
SPSB4-204ENST00000508828 TRIM6-TRIM34B2RNG4 842 aa16.18■□□□□ 0.18
SPSB4-204ENST00000508828 GNPATO15228 680 aa16.18■□□□□ 0.18
SPSB4-204ENST00000508828 CIAO1O76071 339 aa16.18■□□□□ 0.18
SPSB4-204ENST00000508828 CSF1RP07333 972 aa16.18■□□□□ 0.18
SPSB4-204ENST00000508828 IL15P40933 162 aaPredicted RBP16.18■□□□□ 0.18
SPSB4-204ENST00000508828 TAF7LQ5H9L4 462 aa16.18■□□□□ 0.18
SPSB4-204ENST00000508828 PI4K2BQ8TCG2 481 aa16.18■□□□□ 0.18
SPSB4-204ENST00000508828 UTP14AQ9BVJ6 771 aaKnown RBP16.18■□□□□ 0.18
SPSB4-204ENST00000508828 ECHDC1Q9NTX5 307 aa16.18■□□□□ 0.18
SPSB4-204ENST00000508828 NIP7Q9Y221 180 aaKnown RBP eCLIP16.18■□□□□ 0.18
SPSB4-204ENST00000508828 RTCBQ9Y3I0 505 aaKnown RBP16.18■□□□□ 0.18
SPSB4-204ENST00000508828 AK9Q5TCS8 1911 aa16.17■□□□□ 0.18
SPSB4-204ENST00000508828 EYA2O00167 538 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms