RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 U2SURPO15042 1029 aaKnown RBP12.62□□□□□ -0.39
NEDD9-211ENST00000508546 SAPCD2Q86UD0 394 aa12.62□□□□□ -0.39
NEDD9-211ENST00000508546 SYNE4Q8N205 404 aa12.62□□□□□ -0.39
NEDD9-211ENST00000508546 GCC1Q96CN9 775 aa12.62□□□□□ -0.39
NEDD9-211ENST00000508546 PSMD1Q99460 953 aa12.62□□□□□ -0.39
NEDD9-211ENST00000508546 LAMB4A4D0S4 1761 aa12.61□□□□□ -0.39
NEDD9-211ENST00000508546 SNRPA1P09661 255 aaKnown RBP12.61□□□□□ -0.39
NEDD9-211ENST00000508546 PIP4K2AP48426 406 aaPredicted RBP12.61□□□□□ -0.39
NEDD9-211ENST00000508546 CC2D1BQ5T0F9 858 aaKnown RBP12.61□□□□□ -0.39
NEDD9-211ENST00000508546 OLFM4Q6UX06 510 aa12.61□□□□□ -0.39
NEDD9-211ENST00000508546 ZIC5Q96T25 663 aa12.61□□□□□ -0.39
NEDD9-211ENST00000508546 NIP7Q9Y221 180 aaKnown RBP eCLIP12.61□□□□□ -0.39
NEDD9-211ENST00000508546 PRAMEF22A3QJZ6 481 aa12.6□□□□□ -0.39
NEDD9-211ENST00000508546 CC2D2BQ6DHV5 1058 aa12.6□□□□□ -0.39
NEDD9-211ENST00000508546 JDP2Q8WYK2 163 aa12.6□□□□□ -0.39
NEDD9-211ENST00000508546 MKI67P46013 3256 aaKnown RBP12.6□□□□□ -0.39
NEDD9-211ENST00000508546 NBPF26B4DH59 902 aa12.59□□□□□ -0.39
NEDD9-211ENST00000508546 SCNN1DP51172 638 aa12.59□□□□□ -0.39
NEDD9-211ENST00000508546 CRY2Q49AN0 593 aa12.59□□□□□ -0.39
NEDD9-211ENST00000508546 NBPF10Q6P3W6 841 aaKnown RBP12.59□□□□□ -0.39
NEDD9-211ENST00000508546 NBPF15Q8N660 670 aa12.59□□□□□ -0.39
NEDD9-211ENST00000508546 PHACTR3Q96KR7 559 aa12.59□□□□□ -0.39
NEDD9-211ENST00000508546 PCGF6Q9BYE7 350 aa12.59□□□□□ -0.39
NEDD9-211ENST00000508546 RSPH6AQ9H0K4 717 aa12.59□□□□□ -0.39
NEDD9-211ENST00000508546 CELF2O95319 508 aaKnown RBP12.58□□□□□ -0.4
NEDD9-211ENST00000508546 PRKAR2BP31323 418 aa12.58□□□□□ -0.4
NEDD9-211ENST00000508546 EIF6P56537 245 aaKnown RBP12.58□□□□□ -0.4
NEDD9-211ENST00000508546 GRIPAP1Q4V328 841 aa12.58□□□□□ -0.4
NEDD9-211ENST00000508546 HHIPL1Q96JK4 782 aa12.58□□□□□ -0.4
NEDD9-211ENST00000508546 RIC1Q4ADV7 1423 aa12.57□□□□□ -0.4
NEDD9-211ENST00000508546 GTF2E1P29083 439 aaPredicted RBP12.57□□□□□ -0.4
NEDD9-211ENST00000508546 LMOD1P29536 600 aaPredicted RBP12.57□□□□□ -0.4
NEDD9-211ENST00000508546 EPS15P42566 896 aa12.57□□□□□ -0.4
NEDD9-211ENST00000508546 FXR1P51114 621 aaKnown RBP eCLIP12.57□□□□□ -0.4
NEDD9-211ENST00000508546 NYXQ9GZU5 481 aa12.57□□□□□ -0.4
NEDD9-211ENST00000508546 DLG5Q8TDM6 1919 aa12.56□□□□□ -0.4
NEDD9-211ENST00000508546 FAM177BA6PVY3 158 aa12.56□□□□□ -0.4
NEDD9-211ENST00000508546 HOXA10P31260 410 aaPredicted RBP12.56□□□□□ -0.4
NEDD9-211ENST00000508546 HLFQ16534 295 aa12.56□□□□□ -0.4
NEDD9-211ENST00000508546 USP50Q70EL3 339 aaPredicted RBP12.56□□□□□ -0.4
NEDD9-211ENST00000508546 RTF1Q92541 710 aaKnown RBP12.56□□□□□ -0.4
NEDD9-211ENST00000508546 GJA3Q9Y6H8 435 aa12.56□□□□□ -0.4
NEDD9-211ENST00000508546 KDM3BQ7LBC6 1761 aa12.56□□□□□ -0.4
NEDD9-211ENST00000508546 ABCC12Q96J65 1359 aa12.56□□□□□ -0.4
NEDD9-211ENST00000508546 IBTKQ9P2D0 1353 aaPredicted RBP12.56□□□□□ -0.4
NEDD9-211ENST00000508546 AKAP11Q9UKA4 1901 aa12.55□□□□□ -0.4
NEDD9-211ENST00000508546 ERVV-1B6SEH8 477 aa12.55□□□□□ -0.4
NEDD9-211ENST00000508546 HTATSF1O43719 755 aaKnown RBP12.55□□□□□ -0.4
NEDD9-211ENST00000508546 NOGQ13253 232 aa12.55□□□□□ -0.4
NEDD9-211ENST00000508546 HPS5Q9UPZ3 1129 aa12.55□□□□□ -0.4
NEDD9-211ENST00000508546 MCM10Q7L590 875 aa12.54□□□□□ -0.4
NEDD9-211ENST00000508546 CTU1Q7Z7A3 348 aaKnown RBP12.54□□□□□ -0.4
NEDD9-211ENST00000508546 LARGE2Q8N3Y3 721 aa12.54□□□□□ -0.4
NEDD9-211ENST00000508546 CFAP53Q96M91 514 aa12.54□□□□□ -0.4
NEDD9-211ENST00000508546 GLIS2Q9BZE0 524 aaPredicted RBP12.54□□□□□ -0.4
NEDD9-211ENST00000508546 SAGE1Q9NXZ1 904 aa12.54□□□□□ -0.4
NEDD9-211ENST00000508546 CUL9Q8IWT3 2517 aa12.53□□□□□ -0.4
NEDD9-211ENST00000508546 NUTM1Q86Y26 1132 aa12.53□□□□□ -0.4
NEDD9-211ENST00000508546 RPGRQ92834 1020 aaKnown RBP12.53□□□□□ -0.4
NEDD9-211ENST00000508546 CRAMP1Q96RY5 1269 aa12.53□□□□□ -0.4
NEDD9-211ENST00000508546 ZNF408Q9H9D4 720 aa12.53□□□□□ -0.4
NEDD9-211ENST00000508546 NUDCQ9Y266 331 aa12.53□□□□□ -0.4
NEDD9-211ENST00000508546 MAP3K15Q6ZN16 1313 aa12.53□□□□□ -0.4
NEDD9-211ENST00000508546 TAF7Q15545 349 aaPredicted RBP12.52□□□□□ -0.41
NEDD9-211ENST00000508546 NIM1KQ8IY84 436 aa12.52□□□□□ -0.41
NEDD9-211ENST00000508546 VPS33BQ9H267 617 aa12.52□□□□□ -0.41
NEDD9-211ENST00000508546 ADARB2Q9NS39 739 aaKnown RBP12.52□□□□□ -0.41
NEDD9-211ENST00000508546 SZT2Q5T011 3432 aa12.52□□□□□ -0.41
NEDD9-211ENST00000508546 POLR2AP24928 1970 aaKnown RBP12.52□□□□□ -0.41
NEDD9-211ENST00000508546 ANKRD36CQ5JPF3 1778 aa12.51□□□□□ -0.41
NEDD9-211ENST00000508546 DCTN1Q14203 1278 aa12.51□□□□□ -0.41
NEDD9-211ENST00000508546 RBM17Q96I25 401 aaKnown RBP12.51□□□□□ -0.41
NEDD9-211ENST00000508546 GPRC5DQ9NZD1 345 aa12.51□□□□□ -0.41
NEDD9-211ENST00000508546 UBN2Q6ZU65 1347 aa12.51□□□□□ -0.41
NEDD9-211ENST00000508546 TRIOBPQ9H2D6 2365 aa12.51□□□□□ -0.41
NEDD9-211ENST00000508546 LAMB2P55268 1798 aa12.51□□□□□ -0.41
NEDD9-211ENST00000508546 FAM155AB1AL88 458 aaPredicted RBP12.5□□□□□ -0.41
NEDD9-211ENST00000508546 DLL1O00548 723 aa12.5□□□□□ -0.41
NEDD9-211ENST00000508546 PPEF1O14829 653 aaPredicted RBP12.5□□□□□ -0.41
NEDD9-211ENST00000508546 U2AF1L5P0DN76 240 aaPredicted RBP12.5□□□□□ -0.41
NEDD9-211ENST00000508546 U2AF1Q01081 240 aaKnown RBP eCLIP12.5□□□□□ -0.412e-6■□□□□ 8.9
NEDD9-211ENST00000508546 PGAP2Q9UHJ9 254 aa12.5□□□□□ -0.41
NEDD9-211ENST00000508546 HTTP42858 3142 aa12.5□□□□□ -0.41
NEDD9-211ENST00000508546 CDHR2Q9BYE9 1310 aa12.49□□□□□ -0.41
NEDD9-211ENST00000508546 PPIP5K2O43314 1243 aa12.49□□□□□ -0.41
NEDD9-211ENST00000508546 TRPA1O75762 1119 aa12.49□□□□□ -0.41
NEDD9-211ENST00000508546 NTSR2O95665 410 aa12.49□□□□□ -0.41
NEDD9-211ENST00000508546 HUNKP57058 714 aa12.49□□□□□ -0.41
NEDD9-211ENST00000508546 CNGB1Q14028 1251 aaPredicted RBP12.49□□□□□ -0.41
NEDD9-211ENST00000508546 SUSD4Q5VX71 490 aa12.49□□□□□ -0.41
NEDD9-211ENST00000508546 KIF6Q6ZMV9 814 aa12.49□□□□□ -0.41
NEDD9-211ENST00000508546 TTLL7Q6ZT98 887 aa12.49□□□□□ -0.41
NEDD9-211ENST00000508546 SLC51AQ86UW1 340 aa12.49□□□□□ -0.41
NEDD9-211ENST00000508546 ZNF34Q8IZ26 560 aa12.49□□□□□ -0.41
NEDD9-211ENST00000508546 RNF186Q9NXI6 227 aa12.49□□□□□ -0.41
NEDD9-211ENST00000508546 CXCL9Q07325 125 aa12.48□□□□□ -0.41
NEDD9-211ENST00000508546 AOC3Q16853 763 aa12.48□□□□□ -0.41
NEDD9-211ENST00000508546 NGEFQ8N5V2 710 aa12.48□□□□□ -0.41
NEDD9-211ENST00000508546 PNISRQ8TF01 805 aaKnown RBP12.48□□□□□ -0.41
NEDD9-211ENST00000508546 ZC3H15Q8WU90 426 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms