RNA–Protein interactions for RNA: ENST00000508126.1

SPSB4-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 2

Gene SPSB4, Length 1,752 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-203ENST00000508126 C8orf34Q49A92 452 aa20.08■□□□□ 0.8
SPSB4-203ENST00000508126 RTL5Q5HYW3 569 aaPredicted RBP20.08■□□□□ 0.8
SPSB4-203ENST00000508126 ERC1Q8IUD2 1116 aa20.08■□□□□ 0.8
SPSB4-203ENST00000508126 KIF1BPQ96EK5 621 aa20.08■□□□□ 0.8
SPSB4-203ENST00000508126 BCL11AQ9H165 835 aa20.08■□□□□ 0.8
SPSB4-203ENST00000508126 ZNF652Q9Y2D9 606 aa20.08■□□□□ 0.8
SPSB4-203ENST00000508126 TRIM37O94972 964 aa20.07■□□□□ 0.8
SPSB4-203ENST00000508126 ZBTB38Q8NAP3 1195 aaPredicted RBP20.07■□□□□ 0.8
SPSB4-203ENST00000508126 PLEKHM2Q8IWE5 1019 aa20.06■□□□□ 0.8
SPSB4-203ENST00000508126 RPS6KA4O75676 772 aa20.06■□□□□ 0.8
SPSB4-203ENST00000508126 ZNF34Q8IZ26 560 aa20.06■□□□□ 0.8
SPSB4-203ENST00000508126 RHPN1Q8TCX5 695 aa20.06■□□□□ 0.8
SPSB4-203ENST00000508126 TAF1LQ8IZX4 1826 aa20.05■□□□□ 0.8
SPSB4-203ENST00000508126 GNPATO15228 680 aa20.05■□□□□ 0.8
SPSB4-203ENST00000508126 FOXO4P98177 505 aa20.05■□□□□ 0.8
SPSB4-203ENST00000508126 BMP2KLQ5H9B9 411 aa20.05■□□□□ 0.8
SPSB4-203ENST00000508126 LMBR1LQ6UX01 489 aa20.05■□□□□ 0.8
SPSB4-203ENST00000508126 C16orf71Q8IYS4 520 aaPredicted RBP20.05■□□□□ 0.8
SPSB4-203ENST00000508126 BCORQ6W2J9 1755 aa20.05■□□□□ 0.8
SPSB4-203ENST00000508126 CDHR2Q9BYE9 1310 aa20.04■□□□□ 0.8
SPSB4-203ENST00000508126 RGL2O15211 777 aa20.04■□□□□ 0.8
SPSB4-203ENST00000508126 G3BP1Q13283 466 aaKnown RBP eCLIP20.04■□□□□ 0.8
SPSB4-203ENST00000508126 SLC27A3Q5K4L6 730 aa20.04■□□□□ 0.8
SPSB4-203ENST00000508126 FAM89AQ96GI7 184 aa20.04■□□□□ 0.8
SPSB4-203ENST00000508126 PA2G4Q9UQ80 394 aaKnown RBP20.04■□□□□ 0.8
SPSB4-203ENST00000508126 RTCBQ9Y3I0 505 aaKnown RBP20.04■□□□□ 0.8
SPSB4-203ENST00000508126 PARP10Q53GL7 1025 aa20.03■□□□□ 0.8
SPSB4-203ENST00000508126 CLEC4GQ6UXB4 293 aa20.03■□□□□ 0.8
SPSB4-203ENST00000508126 PLA2G12BQ9BX93 195 aa20.03■□□□□ 0.8
SPSB4-203ENST00000508126 RGS17Q9UGC6 210 aaPredicted RBP20.03■□□□□ 0.8
SPSB4-203ENST00000508126 TRMT112Q9UI30 125 aaKnown RBP20.03■□□□□ 0.8
SPSB4-203ENST00000508126 CHMP3Q9Y3E7 222 aa20.03■□□□□ 0.8
SPSB4-203ENST00000508126 C4BP0C0L5 1744 aa20.03■□□□□ 0.8
SPSB4-203ENST00000508126 UBN2Q6ZU65 1347 aa20.03■□□□□ 0.8
SPSB4-203ENST00000508126 HMGB2P26583 209 aaKnown RBP20.03■□□□□ 0.8
SPSB4-203ENST00000508126 OTUD7AQ8TE49 926 aaPredicted RBP20.03■□□□□ 0.8
SPSB4-203ENST00000508126 AK7Q96M32 723 aa20.03■□□□□ 0.8
SPSB4-203ENST00000508126 COPRSQ9NQ92 184 aa20.03■□□□□ 0.8
SPSB4-203ENST00000508126 IL1RAPL2Q9NP60 686 aa20.02■□□□□ 0.8
SPSB4-203ENST00000508126 SCN7AQ01118 1682 aa20.02■□□□□ 0.8
SPSB4-203ENST00000508126 POTEAQ6S8J7 498 aa20.01■□□□□ 0.79
SPSB4-203ENST00000508126 RFX5P48382 616 aaPredicted RBP20■□□□□ 0.79
SPSB4-203ENST00000508126 OSBPL3Q9H4L5 887 aa20■□□□□ 0.79
SPSB4-203ENST00000508126 NIP7Q9Y221 180 aaKnown RBP eCLIP20■□□□□ 0.79
SPSB4-203ENST00000508126 MX1P20591 662 aa20■□□□□ 0.79
SPSB4-203ENST00000508126 TTC22Q5TAA0 569 aa20■□□□□ 0.79
SPSB4-203ENST00000508126 CLASRPQ8N2M8 674 aaKnown RBP20■□□□□ 0.79
SPSB4-203ENST00000508126 SIL1Q9H173 461 aa20■□□□□ 0.79
SPSB4-203ENST00000508126 LRRC4BQ9NT99 713 aa20■□□□□ 0.79
SPSB4-203ENST00000508126 NARFQ9UHQ1 456 aa20■□□□□ 0.79
SPSB4-203ENST00000508126 PDE1AP54750 535 aa19.99■□□□□ 0.79
SPSB4-203ENST00000508126 PTPN12Q05209 780 aaKnown RBP19.99■□□□□ 0.79
SPSB4-203ENST00000508126 UTP14AQ9BVJ6 771 aaKnown RBP19.99■□□□□ 0.79
SPSB4-203ENST00000508126 SALL3Q9BXA9 1300 aa19.99■□□□□ 0.79
SPSB4-203ENST00000508126 IRS4O14654 1257 aaPredicted RBP19.98■□□□□ 0.79
SPSB4-203ENST00000508126 ZPR1O75312 459 aa19.98■□□□□ 0.79
SPSB4-203ENST00000508126 KLHDC4Q8TBB5 520 aa19.98■□□□□ 0.79
SPSB4-203ENST00000508126 SH3TC1Q8TE82 1336 aa19.98■□□□□ 0.79
SPSB4-203ENST00000508126 HSP90B1P14625 803 aaKnown RBP19.98■□□□□ 0.79
SPSB4-203ENST00000508126 AOX1Q06278 1338 aa19.98■□□□□ 0.79
SPSB4-203ENST00000508126 GSPT1P15170 499 aaKnown RBP19.97■□□□□ 0.79
SPSB4-203ENST00000508126 ADRA2BP18089 450 aa19.97■□□□□ 0.79
SPSB4-203ENST00000508126 CCDC57Q2TAC2 916 aa19.97■□□□□ 0.79
SPSB4-203ENST00000508126 SUSD4Q5VX71 490 aa19.97■□□□□ 0.79
SPSB4-203ENST00000508126 STAP2Q9UGK3 403 aa19.97■□□□□ 0.79
SPSB4-203ENST00000508126 PDE8AO60658 829 aa19.96■□□□□ 0.79
SPSB4-203ENST00000508126 CSF1RP07333 972 aa19.96■□□□□ 0.79
SPSB4-203ENST00000508126 CTSWP56202 376 aa19.96■□□□□ 0.79
SPSB4-203ENST00000508126 PLSCR1O15162 318 aa19.95■□□□□ 0.78
SPSB4-203ENST00000508126 SASH1O94885 1247 aa19.95■□□□□ 0.78
SPSB4-203ENST00000508126 TXNRD1Q16881 649 aa19.95■□□□□ 0.78
SPSB4-203ENST00000508126 TRAPPC3LQ5T215 181 aa19.95■□□□□ 0.78
SPSB4-203ENST00000508126 USPL1Q5W0Q7 1092 aa19.95■□□□□ 0.78
SPSB4-203ENST00000508126 SYNE4Q8N205 404 aa19.95■□□□□ 0.78
SPSB4-203ENST00000508126 ARHGEF1Q92888 912 aaKnown RBP19.95■□□□□ 0.78
SPSB4-203ENST00000508126 PHF14O94880 888 aa19.95■□□□□ 0.78
SPSB4-203ENST00000508126 APBA3O96018 575 aa19.95■□□□□ 0.78
SPSB4-203ENST00000508126 RFC4P35249 363 aa19.95■□□□□ 0.78
SPSB4-203ENST00000508126 NUTM1Q86Y26 1132 aa19.95■□□□□ 0.78
SPSB4-203ENST00000508126 FAM177BA6PVY3 158 aa19.94■□□□□ 0.78
SPSB4-203ENST00000508126 NTSR2O95665 410 aa19.94■□□□□ 0.78
SPSB4-203ENST00000508126 IFIT2P09913 472 aaKnown RBP19.94■□□□□ 0.78
SPSB4-203ENST00000508126 IFIT5Q13325 482 aaKnown RBP19.94■□□□□ 0.78
SPSB4-203ENST00000508126 SMIM5Q71RC9 77 aa19.94■□□□□ 0.78
SPSB4-203ENST00000508126 GPATCH3Q96I76 525 aa19.94■□□□□ 0.78
SPSB4-203ENST00000508126 SRP68Q9UHB9 627 aaKnown RBP19.94■□□□□ 0.78
SPSB4-203ENST00000508126 EP400Q96L91 3159 aa19.94■□□□□ 0.78
SPSB4-203ENST00000508126 MYH3P11055 1940 aa19.93■□□□□ 0.78
SPSB4-203ENST00000508126 USP42Q9H9J4 1324 aaKnown RBP19.93■□□□□ 0.78
SPSB4-203ENST00000508126 AACSQ86V21 672 aa19.93■□□□□ 0.78
SPSB4-203ENST00000508126 BCL2L12Q9HB09 334 aa19.93■□□□□ 0.78
SPSB4-203ENST00000508126 C4AP0C0L4 1744 aa19.93■□□□□ 0.78
SPSB4-203ENST00000508126 TAF7LQ5H9L4 462 aa19.93■□□□□ 0.78
SPSB4-203ENST00000508126 AMIGO3Q86WK7 504 aa19.93■□□□□ 0.78
SPSB4-203ENST00000508126 TTLL11Q8NHH1 800 aa19.93■□□□□ 0.78
SPSB4-203ENST00000508126 FBXO3Q9UK99 471 aa19.93■□□□□ 0.78
SPSB4-203ENST00000508126 TTC41PQ6P2S7 1318 aa19.92■□□□□ 0.78
SPSB4-203ENST00000508126 CDC45O75419 566 aa19.92■□□□□ 0.78
SPSB4-203ENST00000508126 CIAO1O76071 339 aa19.92■□□□□ 0.78
SPSB4-203ENST00000508126 SSFA2P28290 1259 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms