RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 UPF2Q9HAU5 1272 aaKnown RBP22.8■■□□□ 1.24
SMN2-206ENST00000506734 IL1RAPL2Q9NP60 686 aa22.8■■□□□ 1.24
SMN2-206ENST00000506734 COPRSQ9NQ92 184 aa22.8■■□□□ 1.24
SMN2-206ENST00000506734 TUBGCP6Q96RT7 1819 aa22.79■■□□□ 1.24
SMN2-206ENST00000506734 CDC45O75419 566 aa22.78■■□□□ 1.24
SMN2-206ENST00000506734 PTF1AQ7RTS3 328 aa22.78■■□□□ 1.24
SMN2-206ENST00000506734 BCL11AQ9H165 835 aa22.78■■□□□ 1.24
SMN2-206ENST00000506734 G3BP1Q13283 466 aaKnown RBP eCLIP22.77■■□□□ 1.24
SMN2-206ENST00000506734 ZBTB38Q8NAP3 1195 aaPredicted RBP22.77■■□□□ 1.24
SMN2-206ENST00000506734 ARXQ96QS3 562 aa22.77■■□□□ 1.24
SMN2-206ENST00000506734 CNTNAP4Q9C0A0 1308 aa22.77■■□□□ 1.24
SMN2-206ENST00000506734 PTPN12Q05209 780 aaKnown RBP22.76■■□□□ 1.23
SMN2-206ENST00000506734 NLRP10Q86W26 655 aa22.76■■□□□ 1.23
SMN2-206ENST00000506734 LINC00116Q8NCU8 138 aa22.76■■□□□ 1.23
SMN2-206ENST00000506734 IPO9Q96P70 1041 aaKnown RBP22.76■■□□□ 1.23
SMN2-206ENST00000506734 PLA2G12BQ9BX93 195 aa22.76■■□□□ 1.23
SMN2-206ENST00000506734 TBC1D2BQ9UPU7 963 aa22.76■■□□□ 1.23
SMN2-206ENST00000506734 CDHR2Q9BYE9 1310 aa22.76■■□□□ 1.23
SMN2-206ENST00000506734 USP42Q9H9J4 1324 aaKnown RBP22.76■■□□□ 1.23
SMN2-206ENST00000506734 LY75O60449 1722 aa22.76■■□□□ 1.23
SMN2-206ENST00000506734 SDSP20132 328 aa22.76■■□□□ 1.23
SMN2-206ENST00000506734 FAM182BQ5T319 152 aa22.76■■□□□ 1.23
SMN2-206ENST00000506734 LMBR1LQ6UX01 489 aa22.76■■□□□ 1.23
SMN2-206ENST00000506734 TBC1D9Q6ZT07 1266 aa22.76■■□□□ 1.23
SMN2-206ENST00000506734 ZNF34Q8IZ26 560 aa22.75■■□□□ 1.23
SMN2-206ENST00000506734 CLASRPQ8N2M8 674 aaKnown RBP22.75■■□□□ 1.23
SMN2-206ENST00000506734 TBC1D32Q96NH3 1257 aa22.75■■□□□ 1.23
SMN2-206ENST00000506734 EIF5BO60841 1220 aaKnown RBP22.74■■□□□ 1.23
SMN2-206ENST00000506734 SASH1O94885 1247 aa22.74■■□□□ 1.23
SMN2-206ENST00000506734 CAMTA2O94983 1202 aa22.73■■□□□ 1.23
SMN2-206ENST00000506734 RC3H1Q5TC82 1133 aaKnown RBP22.73■■□□□ 1.23
SMN2-206ENST00000506734 NUTM1Q86Y26 1132 aa22.73■■□□□ 1.23
SMN2-206ENST00000506734 BCORQ6W2J9 1755 aa22.73■■□□□ 1.23
SMN2-206ENST00000506734 ZNF772Q68DY9 489 aaPredicted RBP22.72■■□□□ 1.23
SMN2-206ENST00000506734 TTC41PQ6P2S7 1318 aa22.72■■□□□ 1.23
SMN2-206ENST00000506734 RGL2O15211 777 aa22.72■■□□□ 1.23
SMN2-206ENST00000506734 GPTP24298 496 aa22.72■■□□□ 1.23
SMN2-206ENST00000506734 RTL5Q5HYW3 569 aaPredicted RBP22.72■■□□□ 1.23
SMN2-206ENST00000506734 KLHDC4Q8TBB5 520 aa22.72■■□□□ 1.23
SMN2-206ENST00000506734 DDRGK1Q96HY6 314 aa22.72■■□□□ 1.23
SMN2-206ENST00000506734 BCL11BQ9C0K0 894 aaPredicted RBP22.72■■□□□ 1.23
SMN2-206ENST00000506734 BRWD3Q6RI45 1802 aa22.71■■□□□ 1.23
SMN2-206ENST00000506734 MFAP1P55081 439 aaKnown RBP22.71■■□□□ 1.23
SMN2-206ENST00000506734 TSHZ3Q63HK5 1081 aa22.71■■□□□ 1.23
SMN2-206ENST00000506734 PI4K2BQ8TCG2 481 aa22.71■■□□□ 1.23
SMN2-206ENST00000506734 SIL1Q9H173 461 aa22.71■■□□□ 1.23
SMN2-206ENST00000506734 UBN2Q6ZU65 1347 aa22.7■■□□□ 1.22
SMN2-206ENST00000506734 FAM89AQ96GI7 184 aa22.7■■□□□ 1.22
SMN2-206ENST00000506734 CSF1RP07333 972 aa22.69■■□□□ 1.22
SMN2-206ENST00000506734 CCNL1Q9UK58 526 aaPredicted RBP22.69■■□□□ 1.22
SMN2-206ENST00000506734 TAF1LQ8IZX4 1826 aa22.69■■□□□ 1.22
SMN2-206ENST00000506734 PARP10Q53GL7 1025 aa22.68■■□□□ 1.22
SMN2-206ENST00000506734 FAM196AQ6ZSG2 479 aa22.68■■□□□ 1.22
SMN2-206ENST00000506734 KRT27Q7Z3Y8 459 aa22.68■■□□□ 1.22
SMN2-206ENST00000506734 IFIT2P09913 472 aaKnown RBP22.67■■□□□ 1.22
SMN2-206ENST00000506734 RBM6P78332 1123 aaKnown RBP22.67■■□□□ 1.22
SMN2-206ENST00000506734 CASC1Q6TDU7 716 aa22.67■■□□□ 1.22
SMN2-206ENST00000506734 CLEC4GQ6UXB4 293 aa22.67■■□□□ 1.22
SMN2-206ENST00000506734 AACSQ86V21 672 aa22.67■■□□□ 1.22
SMN2-206ENST00000506734 GPATCH3Q96I76 525 aa22.67■■□□□ 1.22
SMN2-206ENST00000506734 CHMP3Q9Y3E7 222 aa22.67■■□□□ 1.22
SMN2-206ENST00000506734 SCN7AQ01118 1682 aa22.67■■□□□ 1.22
SMN2-206ENST00000506734 EAF2Q96CJ1 260 aaPredicted RBP22.67■■□□□ 1.22
SMN2-206ENST00000506734 AK7Q96M32 723 aa22.67■■□□□ 1.22
SMN2-206ENST00000506734 C22orf23Q9BZE7 217 aa22.67■■□□□ 1.22
SMN2-206ENST00000506734 TRMT112Q9UI30 125 aaKnown RBP22.67■■□□□ 1.22
SMN2-206ENST00000506734 ZNF652Q9Y2D9 606 aa22.67■■□□□ 1.22
SMN2-206ENST00000506734 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.67■■□□□ 1.22
SMN2-206ENST00000506734 MYH3P11055 1940 aa22.66■■□□□ 1.22
SMN2-206ENST00000506734 ERC2O15083 957 aa22.66■■□□□ 1.22
SMN2-206ENST00000506734 MSH5O43196 834 aa22.66■■□□□ 1.22
SMN2-206ENST00000506734 RPS6KA4O75676 772 aa22.66■■□□□ 1.22
SMN2-206ENST00000506734 GLRX3O76003 335 aaKnown RBP22.66■■□□□ 1.22
SMN2-206ENST00000506734 CIAO1O76071 339 aa22.66■■□□□ 1.22
SMN2-206ENST00000506734 ECHDC1Q9NTX5 307 aa22.66■■□□□ 1.22
SMN2-206ENST00000506734 FBXO3Q9UK99 471 aa22.66■■□□□ 1.22
SMN2-206ENST00000506734 IRS4O14654 1257 aaPredicted RBP22.65■■□□□ 1.22
SMN2-206ENST00000506734 KCNQ4P56696 695 aa22.65■■□□□ 1.22
SMN2-206ENST00000506734 RBM25P49756 843 aaKnown RBP22.64■■□□□ 1.22
SMN2-206ENST00000506734 ATG9AQ7Z3C6 839 aa22.64■■□□□ 1.22
SMN2-206ENST00000506734 EYA2O00167 538 aa22.63■■□□□ 1.21
SMN2-206ENST00000506734 PDE8AO60658 829 aa22.63■■□□□ 1.21
SMN2-206ENST00000506734 IL15P40933 162 aaPredicted RBP22.63■■□□□ 1.21
SMN2-206ENST00000506734 CTSWP56202 376 aa22.63■■□□□ 1.21
SMN2-206ENST00000506734 CCDC57Q2TAC2 916 aa22.63■■□□□ 1.21
SMN2-206ENST00000506734 SUSD4Q5VX71 490 aa22.63■■□□□ 1.21
SMN2-206ENST00000506734 SYNE4Q8N205 404 aa22.63■■□□□ 1.21
SMN2-206ENST00000506734 C4BP0C0L5 1744 aa22.63■■□□□ 1.21
SMN2-206ENST00000506734 TFCP2Q12800 502 aa22.63■■□□□ 1.21
SMN2-206ENST00000506734 TNNI3KQ59H18 835 aa22.63■■□□□ 1.21
SMN2-206ENST00000506734 TTLL11Q8NHH1 800 aa22.63■■□□□ 1.21
SMN2-206ENST00000506734 UTP14AQ9BVJ6 771 aaKnown RBP22.63■■□□□ 1.21
SMN2-206ENST00000506734 GPR108Q9NPR9 543 aa22.63■■□□□ 1.21
SMN2-206ENST00000506734 FPGT-TNNI3KV9GXZ4 949 aa22.63■■□□□ 1.21
SMN2-206ENST00000506734 SH3TC1Q8TE82 1336 aa22.62■■□□□ 1.21
SMN2-206ENST00000506734 TRIM6-TRIM34B2RNG4 842 aa22.62■■□□□ 1.21
SMN2-206ENST00000506734 LAMB2P55268 1798 aa22.61■■□□□ 1.21
SMN2-206ENST00000506734 RILPL2Q969X0 211 aa22.61■■□□□ 1.21
SMN2-206ENST00000506734 NIP7Q9Y221 180 aaKnown RBP eCLIP22.61■■□□□ 1.21
SMN2-206ENST00000506734 AK9Q5TCS8 1911 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms