RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 SIRT2Q8IXJ6 389 aa14.12□□□□□ -0.15
ITGA3-208ENST00000506437 UBE3BQ7Z3V4 1068 aa14.11□□□□□ -0.15
ITGA3-208ENST00000506437 PPP4R3BQ5MIZ7 849 aa14.11□□□□□ -0.15
ITGA3-208ENST00000506437 SMAP1Q8IYB5 467 aaPredicted RBP14.11□□□□□ -0.15
ITGA3-208ENST00000506437 FAM89AQ96GI7 184 aa14.11□□□□□ -0.15
ITGA3-208ENST00000506437 KIF6Q6ZMV9 814 aa14.1□□□□□ -0.15
ITGA3-208ENST00000506437 KLHDC4Q8TBB5 520 aa14.1□□□□□ -0.15
ITGA3-208ENST00000506437 TEX13AQ9BXU3 409 aaPredicted RBP14.1□□□□□ -0.15
ITGA3-208ENST00000506437 TJP1Q07157 1748 aa14.1□□□□□ -0.15
ITGA3-208ENST00000506437 ANP32BQ92688 251 aaKnown RBP14.1□□□□□ -0.15
ITGA3-208ENST00000506437 METTL22Q9BUU2 404 aaPredicted RBP14.1□□□□□ -0.15
ITGA3-208ENST00000506437 PDGFDQ9GZP0 370 aaPredicted RBP14.1□□□□□ -0.15
ITGA3-208ENST00000506437 A0A087WZG4 1122 aa14.09□□□□□ -0.15
ITGA3-208ENST00000506437 PNMA6EA0A0J9YXQ4 647 aa14.09□□□□□ -0.15
ITGA3-208ENST00000506437 NEURL1BA8MQ27 555 aa14.09□□□□□ -0.15
ITGA3-208ENST00000506437 CCT4P50991 539 aaKnown RBP14.09□□□□□ -0.15
ITGA3-208ENST00000506437 EIF5P55010 431 aaKnown RBP14.09□□□□□ -0.15
ITGA3-208ENST00000506437 NEXNQ0ZGT2 675 aa14.09□□□□□ -0.15
ITGA3-208ENST00000506437 PLBD2Q8NHP8 589 aa14.09□□□□□ -0.15
ITGA3-208ENST00000506437 AK7Q96M32 723 aa14.09□□□□□ -0.15
ITGA3-208ENST00000506437 FSD2A1L4K1 749 aa14.09□□□□□ -0.15
ITGA3-208ENST00000506437 UBTFL1P0CB47 393 aaPredicted RBP14.09□□□□□ -0.15
ITGA3-208ENST00000506437 EPHA10Q5JZY3 1008 aa14.09□□□□□ -0.15
ITGA3-208ENST00000506437 USPL1Q5W0Q7 1092 aa14.09□□□□□ -0.15
ITGA3-208ENST00000506437 NUTM1Q86Y26 1132 aa14.09□□□□□ -0.15
ITGA3-208ENST00000506437 CHMP3Q9Y3E7 222 aa14.09□□□□□ -0.15
ITGA3-208ENST00000506437 ZNF827Q17R98 1081 aa14.09□□□□□ -0.15
ITGA3-208ENST00000506437 SOS1Q07889 1333 aaPredicted RBP14.08□□□□□ -0.15
ITGA3-208ENST00000506437 NHSQ6T4R5 1651 aa14.08□□□□□ -0.16
ITGA3-208ENST00000506437 CACNA1FO60840 1977 aa14.08□□□□□ -0.16
ITGA3-208ENST00000506437 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.08□□□□□ -0.16
ITGA3-208ENST00000506437 ARHGEF1Q92888 912 aaKnown RBP14.08□□□□□ -0.16
ITGA3-208ENST00000506437 SUCLG2Q96I99 432 aa14.08□□□□□ -0.16
ITGA3-208ENST00000506437 SPRYD3Q8NCJ5 442 aa14.07□□□□□ -0.16
ITGA3-208ENST00000506437 TFCP2L1Q9NZI6 479 aa14.07□□□□□ -0.16
ITGA3-208ENST00000506437 IL6STP40189 918 aaPredicted RBP14.07□□□□□ -0.16
ITGA3-208ENST00000506437 GCKRQ14397 625 aa14.07□□□□□ -0.16
ITGA3-208ENST00000506437 MSL1Q68DK7 614 aa14.07□□□□□ -0.16
ITGA3-208ENST00000506437 LINS1Q8NG48 757 aa14.07□□□□□ -0.16
ITGA3-208ENST00000506437 PA2G4Q9UQ80 394 aaKnown RBP14.07□□□□□ -0.16
ITGA3-208ENST00000506437 EXOC6BQ9Y2D4 811 aa14.07□□□□□ -0.16
ITGA3-208ENST00000506437 RTCBQ9Y3I0 505 aaKnown RBP14.07□□□□□ -0.16
ITGA3-208ENST00000506437 COL15A1P39059 1388 aa14.07□□□□□ -0.16
ITGA3-208ENST00000506437 LAMB4A4D0S4 1761 aa14.07□□□□□ -0.16
ITGA3-208ENST00000506437 TRIM44Q96DX7 344 aaPredicted RBP14.06□□□□□ -0.16
ITGA3-208ENST00000506437 MAP3K15Q6ZN16 1313 aa14.06□□□□□ -0.16
ITGA3-208ENST00000506437 SMARCA5O60264 1052 aaPredicted RBP14.06□□□□□ -0.16
ITGA3-208ENST00000506437 SIL1Q9H173 461 aa14.06□□□□□ -0.16
ITGA3-208ENST00000506437 UBN2Q6ZU65 1347 aa14.06□□□□□ -0.16
ITGA3-208ENST00000506437 GRM8O00222 908 aa14.06□□□□□ -0.16
ITGA3-208ENST00000506437 C8orf34Q49A92 452 aa14.06□□□□□ -0.16
ITGA3-208ENST00000506437 CEP85Q6P2H3 762 aa14.06□□□□□ -0.16
ITGA3-208ENST00000506437 KAZALD1Q96I82 304 aa14.06□□□□□ -0.16
ITGA3-208ENST00000506437 BICC1Q9H694 974 aaKnown RBP14.06□□□□□ -0.16
ITGA3-208ENST00000506437 NIP7Q9Y221 180 aaKnown RBP eCLIP14.06□□□□□ -0.16
ITGA3-208ENST00000506437 CHMP4AQ9BY43 222 aa14.05□□□□□ -0.16
ITGA3-208ENST00000506437 GNAI2P04899 355 aa14.05□□□□□ -0.16
ITGA3-208ENST00000506437 HCLS1P14317 486 aaPredicted RBP14.05□□□□□ -0.16
ITGA3-208ENST00000506437 R3HCC1Q9Y3T6 440 aaKnown RBP14.05□□□□□ -0.16
ITGA3-208ENST00000506437 CAMTA2O94983 1202 aa14.04□□□□□ -0.16
ITGA3-208ENST00000506437 RFC4P35249 363 aa14.04□□□□□ -0.16
ITGA3-208ENST00000506437 DMTNQ08495 405 aa14.04□□□□□ -0.16
ITGA3-208ENST00000506437 TCIRG1Q13488 830 aa14.04□□□□□ -0.16
ITGA3-208ENST00000506437 ZSCAN20P17040 1043 aaPredicted RBP14.04□□□□□ -0.16
ITGA3-208ENST00000506437 TBC1D9BQ66K14 1250 aa14.04□□□□□ -0.16
ITGA3-208ENST00000506437 GIGYF2Q6Y7W6 1299 aaKnown RBP14.04□□□□□ -0.16
ITGA3-208ENST00000506437 PPP1R42Q7Z4L9 355 aa14.04□□□□□ -0.16
ITGA3-208ENST00000506437 SRGAP3O43295 1099 aa14.04□□□□□ -0.16
ITGA3-208ENST00000506437 LNPKQ9C0E8 428 aa14.04□□□□□ -0.16
ITGA3-208ENST00000506437 TRMT112Q9UI30 125 aaKnown RBP14.04□□□□□ -0.16
ITGA3-208ENST00000506437 TRAPPC3LQ5T215 181 aa14.03□□□□□ -0.16
ITGA3-208ENST00000506437 SUSD4Q5VX71 490 aa14.03□□□□□ -0.16
ITGA3-208ENST00000506437 BCL2L12Q9HB09 334 aa14.03□□□□□ -0.16
ITGA3-208ENST00000506437 CWC25Q9NXE8 425 aaPredicted RBP14.03□□□□□ -0.16
ITGA3-208ENST00000506437 ARFGEF2Q9Y6D5 1785 aa14.03□□□□□ -0.16
ITGA3-208ENST00000506437 ZPR1O75312 459 aa14.03□□□□□ -0.16
ITGA3-208ENST00000506437 SF3B2Q13435 895 aaKnown RBP14.03□□□□□ -0.16
ITGA3-208ENST00000506437 RPS6KA4O75676 772 aa14.02□□□□□ -0.16
ITGA3-208ENST00000506437 C16orf71Q8IYS4 520 aaPredicted RBP14.02□□□□□ -0.16
ITGA3-208ENST00000506437 ZNF594Q96JF6 807 aaPredicted RBP14.02□□□□□ -0.16
ITGA3-208ENST00000506437 ANKRD45Q5TZF3 282 aa14.02□□□□□ -0.17
ITGA3-208ENST00000506437 SLC51AQ86UW1 340 aa14.02□□□□□ -0.17
ITGA3-208ENST00000506437 NLRP10Q86W26 655 aa14.02□□□□□ -0.17
ITGA3-208ENST00000506437 SECISBP2LQ93073 1101 aaKnown RBP14.02□□□□□ -0.17
ITGA3-208ENST00000506437 KDM2BQ8NHM5 1336 aa14.02□□□□□ -0.17
ITGA3-208ENST00000506437 NPHP1O15259 732 aa14.01□□□□□ -0.17
ITGA3-208ENST00000506437 GNAI3P08754 354 aa14.01□□□□□ -0.17
ITGA3-208ENST00000506437 TSHZ3Q63HK5 1081 aa14.01□□□□□ -0.17
ITGA3-208ENST00000506437 AFDNP55196 1824 aaKnown RBP14.01□□□□□ -0.17
ITGA3-208ENST00000506437 GRPEL1Q9HAV7 217 aa14.01□□□□□ -0.17
ITGA3-208ENST00000506437 WWC3Q9ULE0 1092 aa14.01□□□□□ -0.17
ITGA3-208ENST00000506437 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.01□□□□□ -0.17
ITGA3-208ENST00000506437 ATP10DQ9P241 1426 aa14.01□□□□□ -0.17
ITGA3-208ENST00000506437 LMBR1LQ6UX01 489 aa14.01□□□□□ -0.17
ITGA3-208ENST00000506437 CERS3Q8IU89 383 aa14.01□□□□□ -0.17
ITGA3-208ENST00000506437 RWDD1Q9H446 243 aaPredicted RBP14.01□□□□□ -0.17
ITGA3-208ENST00000506437 IL1RAPL2Q9NP60 686 aa14.01□□□□□ -0.17
ITGA3-208ENST00000506437 PDZRN3Q9UPQ7 1066 aa14.01□□□□□ -0.17
ITGA3-208ENST00000506437 OTUD7AQ8TE49 926 aaPredicted RBP14□□□□□ -0.17
ITGA3-208ENST00000506437 IGSF3O75054 1194 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms