RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 CASP7P55210 303 aa14.84□□□□□ -0.03
POLR2J3-211ENST00000506060 RABL6Q3YEC7 729 aaPredicted RBP14.84□□□□□ -0.03
POLR2J3-211ENST00000506060 NLRP10Q86W26 655 aa14.84□□□□□ -0.03
POLR2J3-211ENST00000506060 RTCBQ9Y3I0 505 aaKnown RBP14.84□□□□□ -0.03
POLR2J3-211ENST00000506060 CDHR2Q9BYE9 1310 aa14.84□□□□□ -0.03
POLR2J3-211ENST00000506060 TRIM37O94972 964 aa14.83□□□□□ -0.04
POLR2J3-211ENST00000506060 CAMTA2O94983 1202 aa14.83□□□□□ -0.04
POLR2J3-211ENST00000506060 HLFQ16534 295 aa14.83□□□□□ -0.04
POLR2J3-211ENST00000506060 BMP2KLQ5H9B9 411 aa14.83□□□□□ -0.04
POLR2J3-211ENST00000506060 PTF1AQ7RTS3 328 aa14.83□□□□□ -0.04
POLR2J3-211ENST00000506060 KAZALD1Q96I82 304 aa14.83□□□□□ -0.04
POLR2J3-211ENST00000506060 AK7Q96M32 723 aa14.83□□□□□ -0.04
POLR2J3-211ENST00000506060 PLA2G12BQ9BX93 195 aa14.83□□□□□ -0.04
POLR2J3-211ENST00000506060 GNPATO15228 680 aa14.82□□□□□ -0.04
POLR2J3-211ENST00000506060 ZPR1O75312 459 aa14.82□□□□□ -0.04
POLR2J3-211ENST00000506060 ADRA2BP18089 450 aa14.82□□□□□ -0.04
POLR2J3-211ENST00000506060 GPTP24298 496 aa14.82□□□□□ -0.04
POLR2J3-211ENST00000506060 ZNF34Q8IZ26 560 aa14.82□□□□□ -0.04
POLR2J3-211ENST00000506060 RHPN1Q8TCX5 695 aa14.82□□□□□ -0.04
POLR2J3-211ENST00000506060 TRMT112Q9UI30 125 aaKnown RBP14.82□□□□□ -0.04
POLR2J3-211ENST00000506060 TAF1LQ8IZX4 1826 aa14.82□□□□□ -0.04
POLR2J3-211ENST00000506060 LMBR1LQ6UX01 489 aa14.81□□□□□ -0.04
POLR2J3-211ENST00000506060 PLEKHM2Q8IWE5 1019 aa14.81□□□□□ -0.04
POLR2J3-211ENST00000506060 CLASRPQ8N2M8 674 aaKnown RBP14.81□□□□□ -0.04
POLR2J3-211ENST00000506060 GPATCH3Q96I76 525 aa14.81□□□□□ -0.04
POLR2J3-211ENST00000506060 COPRSQ9NQ92 184 aa14.81□□□□□ -0.04
POLR2J3-211ENST00000506060 CHMP3Q9Y3E7 222 aa14.81□□□□□ -0.04
POLR2J3-211ENST00000506060 SMARCA5O60264 1052 aaPredicted RBP14.8□□□□□ -0.04
POLR2J3-211ENST00000506060 UTP14AQ9BVJ6 771 aaKnown RBP14.8□□□□□ -0.04
POLR2J3-211ENST00000506060 UPF2Q9HAU5 1272 aaKnown RBP14.8□□□□□ -0.04
POLR2J3-211ENST00000506060 NARFQ9UHQ1 456 aa14.8□□□□□ -0.04
POLR2J3-211ENST00000506060 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
POLR2J3-211ENST00000506060 RBM19Q9Y4C8 960 aaKnown RBP14.8□□□□□ -0.04
POLR2J3-211ENST00000506060 AOX1Q06278 1338 aa14.8□□□□□ -0.04
POLR2J3-211ENST00000506060 BCORQ6W2J9 1755 aa14.8□□□□□ -0.04
POLR2J3-211ENST00000506060 C4BP0C0L5 1744 aa14.79□□□□□ -0.04
POLR2J3-211ENST00000506060 FOXO4P98177 505 aa14.79□□□□□ -0.04
POLR2J3-211ENST00000506060 CCDC57Q2TAC2 916 aa14.79□□□□□ -0.04
POLR2J3-211ENST00000506060 EPHA10Q5JZY3 1008 aa14.79□□□□□ -0.04
POLR2J3-211ENST00000506060 SH3TC1Q8TE82 1336 aa14.79□□□□□ -0.04
POLR2J3-211ENST00000506060 JARID2Q92833 1246 aaPredicted RBP14.79□□□□□ -0.04
POLR2J3-211ENST00000506060 FAM89AQ96GI7 184 aa14.79□□□□□ -0.04
POLR2J3-211ENST00000506060 OSBPL3Q9H4L5 887 aa14.79□□□□□ -0.04
POLR2J3-211ENST00000506060 NIP7Q9Y221 180 aaKnown RBP eCLIP14.79□□□□□ -0.04
POLR2J3-211ENST00000506060 IRS4O14654 1257 aaPredicted RBP14.78□□□□□ -0.04
POLR2J3-211ENST00000506060 PLSCR1O15162 318 aa14.78□□□□□ -0.04
POLR2J3-211ENST00000506060 PDE8AO60658 829 aa14.78□□□□□ -0.04
POLR2J3-211ENST00000506060 MX1P20591 662 aa14.78□□□□□ -0.04
POLR2J3-211ENST00000506060 RFC4P35249 363 aa14.78□□□□□ -0.04
POLR2J3-211ENST00000506060 KCNQ4P56696 695 aa14.78□□□□□ -0.04
POLR2J3-211ENST00000506060 C8orf34Q49A92 452 aa14.78□□□□□ -0.04
POLR2J3-211ENST00000506060 RTL5Q5HYW3 569 aaPredicted RBP14.78□□□□□ -0.04
POLR2J3-211ENST00000506060 TRAPPC3LQ5T215 181 aa14.78□□□□□ -0.04
POLR2J3-211ENST00000506060 TTC22Q5TAA0 569 aa14.78□□□□□ -0.04
POLR2J3-211ENST00000506060 BCL11AQ9H165 835 aa14.78□□□□□ -0.04
POLR2J3-211ENST00000506060 MYH3P11055 1940 aa14.77□□□□□ -0.04
POLR2J3-211ENST00000506060 IFIT2P09913 472 aaKnown RBP14.77□□□□□ -0.05
POLR2J3-211ENST00000506060 PDE1AP54750 535 aa14.77□□□□□ -0.05
POLR2J3-211ENST00000506060 TAF7LQ5H9L4 462 aa14.77□□□□□ -0.05
POLR2J3-211ENST00000506060 CASC1Q6TDU7 716 aa14.77□□□□□ -0.05
POLR2J3-211ENST00000506060 NYXQ9GZU5 481 aa14.77□□□□□ -0.05
POLR2J3-211ENST00000506060 STAP2Q9UGK3 403 aa14.77□□□□□ -0.05
POLR2J3-211ENST00000506060 PA2G4Q9UQ80 394 aaKnown RBP14.77□□□□□ -0.05
POLR2J3-211ENST00000506060 SCN7AQ01118 1682 aa14.77□□□□□ -0.05
POLR2J3-211ENST00000506060 ERC2O15083 957 aa14.76□□□□□ -0.05
POLR2J3-211ENST00000506060 APBA3O96018 575 aa14.76□□□□□ -0.05
POLR2J3-211ENST00000506060 CSF1RP07333 972 aa14.76□□□□□ -0.05
POLR2J3-211ENST00000506060 RFX5P48382 616 aaPredicted RBP14.76□□□□□ -0.05
POLR2J3-211ENST00000506060 PTPN12Q05209 780 aaKnown RBP14.76□□□□□ -0.05
POLR2J3-211ENST00000506060 IFIT5Q13325 482 aaKnown RBP14.76□□□□□ -0.05
POLR2J3-211ENST00000506060 C16orf71Q8IYS4 520 aaPredicted RBP14.76□□□□□ -0.05
POLR2J3-211ENST00000506060 IL1RAPL2Q9NP60 686 aa14.76□□□□□ -0.05
POLR2J3-211ENST00000506060 TTC41PQ6P2S7 1318 aa14.75□□□□□ -0.05
POLR2J3-211ENST00000506060 UBN2Q6ZU65 1347 aa14.75□□□□□ -0.05
POLR2J3-211ENST00000506060 CIAO1O76071 339 aa14.75□□□□□ -0.05
POLR2J3-211ENST00000506060 SSFA2P28290 1259 aa14.75□□□□□ -0.05
POLR2J3-211ENST00000506060 IL15P40933 162 aaPredicted RBP14.75□□□□□ -0.05
POLR2J3-211ENST00000506060 CTSWP56202 376 aa14.75□□□□□ -0.05
POLR2J3-211ENST00000506060 TXNRD1Q16881 649 aa14.75□□□□□ -0.05
POLR2J3-211ENST00000506060 SUSD4Q5VX71 490 aa14.75□□□□□ -0.05
POLR2J3-211ENST00000506060 POTEAQ6S8J7 498 aa14.75□□□□□ -0.05
POLR2J3-211ENST00000506060 SETDB2Q96T68 719 aa14.75□□□□□ -0.05
POLR2J3-211ENST00000506060 SIL1Q9H173 461 aa14.75□□□□□ -0.05
POLR2J3-211ENST00000506060 ANKRD18BA2A2Z9 1011 aa14.74□□□□□ -0.05
POLR2J3-211ENST00000506060 CDC45O75419 566 aa14.74□□□□□ -0.05
POLR2J3-211ENST00000506060 GTF2E1P29083 439 aaPredicted RBP14.74□□□□□ -0.05
POLR2J3-211ENST00000506060 ANP32AP39687 249 aaKnown RBP14.74□□□□□ -0.05
POLR2J3-211ENST00000506060 USPL1Q5W0Q7 1092 aa14.74□□□□□ -0.05
POLR2J3-211ENST00000506060 ARHGEF1Q92888 912 aaKnown RBP14.74□□□□□ -0.05
POLR2J3-211ENST00000506060 RGS17Q9UGC6 210 aaPredicted RBP14.74□□□□□ -0.05
POLR2J3-211ENST00000506060 EYA2O00167 538 aa14.73□□□□□ -0.05
POLR2J3-211ENST00000506060 CCDC152Q4G0S7 254 aa14.73□□□□□ -0.05
POLR2J3-211ENST00000506060 AACSQ86V21 672 aa14.73□□□□□ -0.05
POLR2J3-211ENST00000506060 FLAD1Q8NFF5 587 aa14.73□□□□□ -0.05
POLR2J3-211ENST00000506060 GPR108Q9NPR9 543 aa14.73□□□□□ -0.05
POLR2J3-211ENST00000506060 LRRC4BQ9NT99 713 aa14.73□□□□□ -0.05
POLR2J3-211ENST00000506060 SALL3Q9BXA9 1300 aa14.72□□□□□ -0.05
POLR2J3-211ENST00000506060 USP42Q9H9J4 1324 aaKnown RBP14.72□□□□□ -0.05
POLR2J3-211ENST00000506060 GLRX3O76003 335 aaKnown RBP14.72□□□□□ -0.05
POLR2J3-211ENST00000506060 PHF14O94880 888 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms