RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 ISCA1Q9BUE6 129 aa12.62□□□□□ -0.39
DDX41-203ENST00000504781 CWC25Q9NXE8 425 aaPredicted RBP12.62□□□□□ -0.39
DDX41-203ENST00000504781 RAB11FIP3O75154 756 aa12.61□□□□□ -0.39
DDX41-203ENST00000504781 ITPK1Q13572 414 aa12.61□□□□□ -0.39
DDX41-203ENST00000504781 SYT17Q9BSW7 474 aa12.61□□□□□ -0.39
DDX41-203ENST00000504781 ZBTB1Q9Y2K1 713 aa12.61□□□□□ -0.39
DDX41-203ENST00000504781 CICQ96RK0 1608 aaPredicted RBP12.6□□□□□ -0.39
DDX41-203ENST00000504781 CLEC4GQ6UXB4 293 aa12.6□□□□□ -0.39
DDX41-203ENST00000504781 PPP1R42Q7Z4L9 355 aa12.6□□□□□ -0.39
DDX41-203ENST00000504781 DZIP3Q86Y13 1208 aaKnown RBP12.6□□□□□ -0.39
DDX41-203ENST00000504781 ZBTB3Q9H5J0 574 aa12.6□□□□□ -0.39
DDX41-203ENST00000504781 NOP58Q9Y2X3 529 aaKnown RBP12.6□□□□□ -0.39
DDX41-203ENST00000504781 CNTNAP4Q9C0A0 1308 aa12.6□□□□□ -0.39
DDX41-203ENST00000504781 PNMA6EA0A0J9YXQ4 647 aa12.59□□□□□ -0.39
DDX41-203ENST00000504781 ATP5J2-PTCD1G3V325 749 aa12.59□□□□□ -0.39
DDX41-203ENST00000504781 RPS6KA4O75676 772 aa12.59□□□□□ -0.39
DDX41-203ENST00000504781 POLD1P28340 1107 aa12.59□□□□□ -0.39
DDX41-203ENST00000504781 CASP7P55210 303 aa12.59□□□□□ -0.39
DDX41-203ENST00000504781 SGIP1Q9BQI5 828 aa12.59□□□□□ -0.39
DDX41-203ENST00000504781 PNPLA7Q6ZV29 1317 aa12.59□□□□□ -0.39
DDX41-203ENST00000504781 SRGAP3O43295 1099 aa12.58□□□□□ -0.4
DDX41-203ENST00000504781 RGS3P49796 1198 aa12.58□□□□□ -0.4
DDX41-203ENST00000504781 TJP1Q07157 1748 aa12.58□□□□□ -0.4
DDX41-203ENST00000504781 KAZALD1Q96I82 304 aa12.58□□□□□ -0.4
DDX41-203ENST00000504781 ARFGEF2Q9Y6D5 1785 aa12.57□□□□□ -0.4
DDX41-203ENST00000504781 PCCAP05165 728 aaPredicted RBP12.57□□□□□ -0.4
DDX41-203ENST00000504781 RABL6Q3YEC7 729 aaPredicted RBP12.57□□□□□ -0.4
DDX41-203ENST00000504781 ZNF34Q8IZ26 560 aa12.57□□□□□ -0.4
DDX41-203ENST00000504781 ZBTB38Q8NAP3 1195 aaPredicted RBP12.57□□□□□ -0.4
DDX41-203ENST00000504781 LINC00116Q8NCU8 138 aa12.57□□□□□ -0.4
DDX41-203ENST00000504781 SLC16A10Q8TF71 515 aa12.57□□□□□ -0.4
DDX41-203ENST00000504781 SUCLG2Q96I99 432 aa12.57□□□□□ -0.4
DDX41-203ENST00000504781 TBC1D2BQ9UPU7 963 aa12.57□□□□□ -0.4
DDX41-203ENST00000504781 ZNF330Q9Y3S2 320 aaPredicted RBP12.57□□□□□ -0.4
DDX41-203ENST00000504781 SURF6O75683 361 aaKnown RBP12.56□□□□□ -0.4
DDX41-203ENST00000504781 HSP90B1P14625 803 aaKnown RBP12.56□□□□□ -0.4
DDX41-203ENST00000504781 HLFQ16534 295 aa12.56□□□□□ -0.4
DDX41-203ENST00000504781 PLA2G12BQ9BX93 195 aa12.56□□□□□ -0.4
DDX41-203ENST00000504781 LRRCC1Q9C099 1032 aa12.56□□□□□ -0.4
DDX41-203ENST00000504781 LNPKQ9C0E8 428 aa12.56□□□□□ -0.4
DDX41-203ENST00000504781 ZNF652Q9Y2D9 606 aa12.56□□□□□ -0.4
DDX41-203ENST00000504781 PDE4AP27815 886 aa12.55□□□□□ -0.4
DDX41-203ENST00000504781 GPR162Q16538 588 aa12.55□□□□□ -0.4
DDX41-203ENST00000504781 PARP10Q53GL7 1025 aa12.55□□□□□ -0.4
DDX41-203ENST00000504781 UBE3BQ7Z3V4 1068 aa12.55□□□□□ -0.4
DDX41-203ENST00000504781 NLRP10Q86W26 655 aa12.55□□□□□ -0.4
DDX41-203ENST00000504781 COL23A1Q86Y22 540 aaPredicted RBP12.55□□□□□ -0.4
DDX41-203ENST00000504781 ERC1Q8IUD2 1116 aa12.55□□□□□ -0.4
DDX41-203ENST00000504781 KIF1BPQ96EK5 621 aa12.55□□□□□ -0.4
DDX41-203ENST00000504781 AK7Q96M32 723 aa12.55□□□□□ -0.4
DDX41-203ENST00000504781 BACH2Q9BYV9 841 aa12.55□□□□□ -0.4
DDX41-203ENST00000504781 BICC1Q9H694 974 aaKnown RBP12.55□□□□□ -0.4
DDX41-203ENST00000504781 TSHZ2Q9NRE2 1034 aa12.55□□□□□ -0.4
DDX41-203ENST00000504781 RTCBQ9Y3I0 505 aaKnown RBP12.55□□□□□ -0.4
DDX41-203ENST00000504781 MYH14Q7Z406 1995 aaKnown RBP12.54□□□□□ -0.4
DDX41-203ENST00000504781 CAMTA2O94983 1202 aa12.54□□□□□ -0.4
DDX41-203ENST00000504781 FOXO4P98177 505 aa12.54□□□□□ -0.4
DDX41-203ENST00000504781 FAM161AQ3B820 660 aa12.54□□□□□ -0.4
DDX41-203ENST00000504781 MSL1Q68DK7 614 aa12.54□□□□□ -0.4
DDX41-203ENST00000504781 OSBPL3Q9H4L5 887 aa12.54□□□□□ -0.4
DDX41-203ENST00000504781 CDHR2Q9BYE9 1310 aa12.54□□□□□ -0.4
DDX41-203ENST00000504781 CSF1RP07333 972 aa12.53□□□□□ -0.4
DDX41-203ENST00000504781 G3BP1Q13283 466 aaKnown RBP eCLIP12.53□□□□□ -0.4
DDX41-203ENST00000504781 SKAP1Q86WV1 359 aa12.53□□□□□ -0.4
DDX41-203ENST00000504781 COPRSQ9NQ92 184 aa12.53□□□□□ -0.4
DDX41-203ENST00000504781 NARFQ9UHQ1 456 aa12.53□□□□□ -0.4
DDX41-203ENST00000504781 LY75O60449 1722 aa12.53□□□□□ -0.4
DDX41-203ENST00000504781 NUP98P52948 1817 aa12.53□□□□□ -0.4
DDX41-203ENST00000504781 AFDNP55196 1824 aaKnown RBP12.53□□□□□ -0.4
DDX41-203ENST00000504781 COL5A3P25940 1745 aaPredicted RBP12.52□□□□□ -0.41
DDX41-203ENST00000504781 PHF14O94880 888 aa12.52□□□□□ -0.41
DDX41-203ENST00000504781 EPHA10Q5JZY3 1008 aa12.52□□□□□ -0.41
DDX41-203ENST00000504781 TRAPPC3LQ5T215 181 aa12.52□□□□□ -0.41
DDX41-203ENST00000504781 LMBR1LQ6UX01 489 aa12.52□□□□□ -0.41
DDX41-203ENST00000504781 PLEKHM2Q8IWE5 1019 aa12.52□□□□□ -0.41
DDX41-203ENST00000504781 RHPN1Q8TCX5 695 aa12.52□□□□□ -0.41
DDX41-203ENST00000504781 TRMT112Q9UI30 125 aaKnown RBP12.52□□□□□ -0.41
DDX41-203ENST00000504781 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
DDX41-203ENST00000504781 EXOC6BQ9Y2D4 811 aa12.52□□□□□ -0.41
DDX41-203ENST00000504781 PDE8AO60658 829 aa12.51□□□□□ -0.41
DDX41-203ENST00000504781 EIF5BO60841 1220 aaKnown RBP12.51□□□□□ -0.41
DDX41-203ENST00000504781 ZPR1O75312 459 aa12.51□□□□□ -0.41
DDX41-203ENST00000504781 BMP2KLQ5H9B9 411 aa12.51□□□□□ -0.41
DDX41-203ENST00000504781 UTP14AQ9BVJ6 771 aaKnown RBP12.51□□□□□ -0.41
DDX41-203ENST00000504781 STAP2Q9UGK3 403 aa12.51□□□□□ -0.41
DDX41-203ENST00000504781 RFX5P48382 616 aaPredicted RBP12.5□□□□□ -0.41
DDX41-203ENST00000504781 PTPN12Q05209 780 aaKnown RBP12.5□□□□□ -0.41
DDX41-203ENST00000504781 SMIM5Q71RC9 77 aa12.5□□□□□ -0.41
DDX41-203ENST00000504781 C16orf71Q8IYS4 520 aaPredicted RBP12.5□□□□□ -0.41
DDX41-203ENST00000504781 CLASRPQ8N2M8 674 aaKnown RBP12.5□□□□□ -0.41
DDX41-203ENST00000504781 FLAD1Q8NFF5 587 aa12.5□□□□□ -0.41
DDX41-203ENST00000504781 NLGN2Q8NFZ4 835 aa12.5□□□□□ -0.41
DDX41-203ENST00000504781 JARID2Q92833 1246 aaPredicted RBP12.5□□□□□ -0.41
DDX41-203ENST00000504781 ARHGEF1Q92888 912 aaKnown RBP12.5□□□□□ -0.41
DDX41-203ENST00000504781 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
DDX41-203ENST00000504781 TUBGCP6Q96RT7 1819 aa12.49□□□□□ -0.41
DDX41-203ENST00000504781 GNPATO15228 680 aa12.49□□□□□ -0.41
DDX41-203ENST00000504781 SMARCA5O60264 1052 aaPredicted RBP12.49□□□□□ -0.41
DDX41-203ENST00000504781 GPTP24298 496 aa12.49□□□□□ -0.41
DDX41-203ENST00000504781 RFC4P35249 363 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms