RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 HDGFL2Q7Z4V5 671 aaPredicted RBP16.68■□□□□ 0.26
COL6A4P2-202ENST00000504443 PRAM1Q96QH2 718 aa16.68■□□□□ 0.26
COL6A4P2-202ENST00000504443 ADCK5Q3MIX3 580 aa16.68■□□□□ 0.26
COL6A4P2-202ENST00000504443 BICD2Q8TD16 824 aa16.68■□□□□ 0.26
COL6A4P2-202ENST00000504443 HYPKQ9NX55 129 aa16.68■□□□□ 0.26
COL6A4P2-202ENST00000504443 SASH3O75995 380 aa16.67■□□□□ 0.26
COL6A4P2-202ENST00000504443 ZRANB2O95218 330 aaKnown RBP eCLIP16.67■□□□□ 0.26
COL6A4P2-202ENST00000504443 TPM4P67936 248 aa16.67■□□□□ 0.26
COL6A4P2-202ENST00000504443 COL9A3Q14050 684 aaPredicted RBP16.67■□□□□ 0.26
COL6A4P2-202ENST00000504443 CWC27Q6UX04 472 aaKnown RBP16.67■□□□□ 0.26
COL6A4P2-202ENST00000504443 ERCC4Q92889 916 aaPredicted RBP16.67■□□□□ 0.26
COL6A4P2-202ENST00000504443 SPATA32Q96LK8 384 aa16.67■□□□□ 0.26
COL6A4P2-202ENST00000504443 MUM1L1Q5H9M0 696 aa16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 CLSTN2Q9H4D0 955 aa16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 SLC52A1Q9NWF4 448 aa16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 STAG3Q9UJ98 1225 aa16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 SIGLEC1Q9BZZ2 1709 aa16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 RRS1Q15050 365 aaKnown RBP16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 ME3Q16798 604 aa16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 E4F1Q66K89 784 aaPredicted RBP16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 SIRT1Q96EB6 747 aa16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 LSG1Q9H089 658 aaKnown RBP16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 ANKRD65E5RJM6 399 aa16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 GNAI2P04899 355 aa16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 IFIT2P09913 472 aaKnown RBP16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 LMAN1P49257 510 aa16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 LMOD3Q0VAK6 560 aa16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 GPATCH11Q8N954 259 aa16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 UBXN4Q92575 508 aa16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 JAKMIP1Q96N16 626 aaKnown RBP16.66■□□□□ 0.26
COL6A4P2-202ENST00000504443 SGSM2O43147 1006 aa16.65■□□□□ 0.26
COL6A4P2-202ENST00000504443 CEBPZQ03701 1054 aaKnown RBP16.65■□□□□ 0.26
COL6A4P2-202ENST00000504443 IQCB1Q15051 598 aa16.65■□□□□ 0.26
COL6A4P2-202ENST00000504443 RNF20Q5VTR2 975 aa16.65■□□□□ 0.26
COL6A4P2-202ENST00000504443 DRC1Q96MC2 740 aa16.65■□□□□ 0.26
COL6A4P2-202ENST00000504443 ESF1Q9H501 851 aaKnown RBP16.65■□□□□ 0.26
COL6A4P2-202ENST00000504443 ATG3Q9NT62 314 aa16.65■□□□□ 0.26
COL6A4P2-202ENST00000504443 PDRG1Q9NUG6 133 aa16.65■□□□□ 0.26
COL6A4P2-202ENST00000504443 ICE2Q659A1 982 aa16.65■□□□□ 0.26
COL6A4P2-202ENST00000504443 PGBD1Q96JS3 809 aa16.65■□□□□ 0.26
COL6A4P2-202ENST00000504443 PPP1R13BQ96KQ4 1090 aa16.65■□□□□ 0.26
COL6A4P2-202ENST00000504443 TCEANC2Q96MN5 208 aa16.65■□□□□ 0.26
COL6A4P2-202ENST00000504443 L2HGDHQ9H9P8 463 aa16.65■□□□□ 0.26
COL6A4P2-202ENST00000504443 STAP2Q9UGK3 403 aa16.65■□□□□ 0.26
COL6A4P2-202ENST00000504443 RRP15Q9Y3B9 282 aaKnown RBP16.65■□□□□ 0.26
COL6A4P2-202ENST00000504443 SART3Q15020 963 aaKnown RBP16.64■□□□□ 0.25
COL6A4P2-202ENST00000504443 CDK19Q9BWU1 502 aa16.64■□□□□ 0.25
COL6A4P2-202ENST00000504443 GEMIN8Q9NWZ8 242 aaKnown RBP16.64■□□□□ 0.25
COL6A4P2-202ENST00000504443 ORC3Q9UBD5 711 aaPredicted RBP16.64■□□□□ 0.25
COL6A4P2-202ENST00000504443 YTHDC2Q9H6S0 1430 aaKnown RBP16.64■□□□□ 0.25
COL6A4P2-202ENST00000504443 BECN2A8MW95 431 aa16.64■□□□□ 0.25
COL6A4P2-202ENST00000504443 MAP2P11137 1827 aaKnown RBP16.64■□□□□ 0.25
COL6A4P2-202ENST00000504443 CCDC93Q567U6 631 aa16.64■□□□□ 0.25
COL6A4P2-202ENST00000504443 HOMER1Q86YM7 354 aa16.64■□□□□ 0.25
COL6A4P2-202ENST00000504443 CPSF1Q10570 1443 aaKnown RBP16.63■□□□□ 0.25
COL6A4P2-202ENST00000504443 SMC1AQ14683 1233 aaKnown RBP16.63■□□□□ 0.25
COL6A4P2-202ENST00000504443 EP400NLQ6ZTU2 488 aa16.63■□□□□ 0.25
COL6A4P2-202ENST00000504443 SRLQ86TD4 932 aa16.63■□□□□ 0.25
COL6A4P2-202ENST00000504443 REXO1L1PQ8IX06 675 aa16.63■□□□□ 0.25
COL6A4P2-202ENST00000504443 LEO1Q8WVC0 666 aaPredicted RBP16.63■□□□□ 0.25
COL6A4P2-202ENST00000504443 DNAI1Q9UI46 699 aa16.63■□□□□ 0.25
COL6A4P2-202ENST00000504443 CDC25BP30305 580 aa16.63■□□□□ 0.25
COL6A4P2-202ENST00000504443 DDX19AQ9NUU7 478 aaKnown RBP16.63■□□□□ 0.25
COL6A4P2-202ENST00000504443 CHL1O00533 1208 aa16.62■□□□□ 0.25
COL6A4P2-202ENST00000504443 NEMFO60524 1076 aa16.62■□□□□ 0.25
COL6A4P2-202ENST00000504443 GNAI3P08754 354 aa16.62■□□□□ 0.25
COL6A4P2-202ENST00000504443 PRPF40BQ6NWY9 871 aaKnown RBP16.62■□□□□ 0.25
COL6A4P2-202ENST00000504443 FOXR1Q6PIV2 292 aa16.62■□□□□ 0.25
COL6A4P2-202ENST00000504443 GPS2Q13227 327 aa16.62■□□□□ 0.25
COL6A4P2-202ENST00000504443 NME9Q86XW9 330 aa16.62■□□□□ 0.25
COL6A4P2-202ENST00000504443 DDX11Q96FC9 970 aa16.62■□□□□ 0.25
COL6A4P2-202ENST00000504443 MRFAP1L1Q96HT8 127 aa16.62■□□□□ 0.25
COL6A4P2-202ENST00000504443 YY1AP1Q9H869 796 aa16.62■□□□□ 0.25
COL6A4P2-202ENST00000504443 HDAC5Q9UQL6 1122 aa16.62■□□□□ 0.25
COL6A4P2-202ENST00000504443 TBC1D8O95759 1140 aa16.61■□□□□ 0.25
COL6A4P2-202ENST00000504443 MYCNP04198 464 aaPredicted RBP16.61■□□□□ 0.25
COL6A4P2-202ENST00000504443 CARD6Q9BX69 1037 aa16.61■□□□□ 0.25
COL6A4P2-202ENST00000504443 ARGLU1Q9NWB6 273 aaPredicted RBP16.61■□□□□ 0.25
COL6A4P2-202ENST00000504443 TPCN1Q9ULQ1 816 aa16.61■□□□□ 0.25
COL6A4P2-202ENST00000504443 CDK12Q9NYV4 1490 aaPredicted RBP16.61■□□□□ 0.25
COL6A4P2-202ENST00000504443 RPGRIP1LQ68CZ1 1315 aa16.61■□□□□ 0.25
COL6A4P2-202ENST00000504443 URI1O94763 535 aaPredicted RBP16.61■□□□□ 0.25
COL6A4P2-202ENST00000504443 PTH1RQ03431 593 aa16.61■□□□□ 0.25
COL6A4P2-202ENST00000504443 PACS2Q86VP3 889 aa16.61■□□□□ 0.25
COL6A4P2-202ENST00000504443 FAM177A1Q8N128 213 aaPredicted RBP16.61■□□□□ 0.25
COL6A4P2-202ENST00000504443 STK3Q13188 491 aa16.6■□□□□ 0.25
COL6A4P2-202ENST00000504443 LARP1Q6PKG0 1096 aaKnown RBP16.6■□□□□ 0.25
COL6A4P2-202ENST00000504443 RBM43Q6ZSC3 357 aaKnown RBP16.6■□□□□ 0.25
COL6A4P2-202ENST00000504443 MNS1Q8NEH6 495 aa16.6■□□□□ 0.25
COL6A4P2-202ENST00000504443 TTC21AQ8NDW8 1320 aa16.6■□□□□ 0.25
COL6A4P2-202ENST00000504443 E2F4Q16254 413 aa16.6■□□□□ 0.25
COL6A4P2-202ENST00000504443 KLHL34Q8N239 644 aa16.6■□□□□ 0.25
COL6A4P2-202ENST00000504443 FBXO18Q8NFZ0 1043 aa16.6■□□□□ 0.25
COL6A4P2-202ENST00000504443 ADAM21Q9UKJ8 722 aa16.6■□□□□ 0.25
COL6A4P2-202ENST00000504443 AATKQ6ZMQ8 1374 aa16.6■□□□□ 0.25
COL6A4P2-202ENST00000504443 KIF20BQ96Q89 1820 aa16.6■□□□□ 0.25
COL6A4P2-202ENST00000504443 PI4K2BQ8TCG2 481 aa16.6■□□□□ 0.25
COL6A4P2-202ENST00000504443 PSEN1P49768 467 aa16.59■□□□□ 0.25
COL6A4P2-202ENST00000504443 CCT4P50991 539 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms