RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 RTL5Q5HYW3 569 aaPredicted RBP22.35■■□□□ 1.17
LINC00535-201ENST00000501400 MYH14Q7Z406 1995 aaKnown RBP22.35■■□□□ 1.17
LINC00535-201ENST00000501400 TRIM6-TRIM34B2RNG4 842 aa22.35■■□□□ 1.17
LINC00535-201ENST00000501400 EIF5BO60841 1220 aaKnown RBP22.35■■□□□ 1.17
LINC00535-201ENST00000501400 TRIM28Q13263 835 aaKnown RBP22.35■■□□□ 1.17
LINC00535-201ENST00000501400 LMBR1LQ6UX01 489 aa22.35■■□□□ 1.17
LINC00535-201ENST00000501400 USP26Q9BXU7 913 aa22.35■■□□□ 1.17
LINC00535-201ENST00000501400 PALLDQ8WX93 1383 aa22.34■■□□□ 1.17
LINC00535-201ENST00000501400 A0A0G2JS52 829 aa22.34■■□□□ 1.17
LINC00535-201ENST00000501400 RILPL2Q969X0 211 aa22.34■■□□□ 1.17
LINC00535-201ENST00000501400 EAF2Q96CJ1 260 aaPredicted RBP22.34■■□□□ 1.17
LINC00535-201ENST00000501400 ZNF831Q5JPB2 1677 aa22.34■■□□□ 1.17
LINC00535-201ENST00000501400 KCNQ2O43526 872 aa22.33■■□□□ 1.17
LINC00535-201ENST00000501400 CHMLP26374 656 aa22.33■■□□□ 1.17
LINC00535-201ENST00000501400 HLFQ16534 295 aa22.33■■□□□ 1.17
LINC00535-201ENST00000501400 GIGYF2Q6Y7W6 1299 aaKnown RBP22.33■■□□□ 1.17
LINC00535-201ENST00000501400 AACSQ86V21 672 aa22.33■■□□□ 1.17
LINC00535-201ENST00000501400 ERC2O15083 957 aa22.33■■□□□ 1.16
LINC00535-201ENST00000501400 USP21Q9UK80 565 aa22.33■■□□□ 1.16
LINC00535-201ENST00000501400 LOC102724428A0A0B4J2F2 783 aa22.32■■□□□ 1.16
LINC00535-201ENST00000501400 IL6STP40189 918 aaPredicted RBP22.32■■□□□ 1.16
LINC00535-201ENST00000501400 SIK1P57059 783 aa22.32■■□□□ 1.16
LINC00535-201ENST00000501400 ESYT1Q9BSJ8 1104 aa22.32■■□□□ 1.16
LINC00535-201ENST00000501400 TLR7Q9NYK1 1049 aaKnown RBP22.32■■□□□ 1.16
LINC00535-201ENST00000501400 MAP4K4O95819 1239 aaPredicted RBP22.31■■□□□ 1.16
LINC00535-201ENST00000501400 ITPK1Q13572 414 aa22.31■■□□□ 1.16
LINC00535-201ENST00000501400 GLRX3O76003 335 aaKnown RBP22.31■■□□□ 1.16
LINC00535-201ENST00000501400 IFIT2P09913 472 aaKnown RBP22.31■■□□□ 1.16
LINC00535-201ENST00000501400 HSPA1LP34931 641 aa22.31■■□□□ 1.16
LINC00535-201ENST00000501400 INTS5Q6P9B9 1019 aaKnown RBP22.31■■□□□ 1.16
LINC00535-201ENST00000501400 ECHDC1Q9NTX5 307 aa22.31■■□□□ 1.16
LINC00535-201ENST00000501400 REC8O95072 547 aa22.29■■□□□ 1.16
LINC00535-201ENST00000501400 ATP6V1AP38606 617 aa22.29■■□□□ 1.16
LINC00535-201ENST00000501400 NHSQ6T4R5 1651 aa22.29■■□□□ 1.16
LINC00535-201ENST00000501400 PCCAP05165 728 aaPredicted RBP22.29■■□□□ 1.16
LINC00535-201ENST00000501400 CRKLP46109 303 aaKnown RBP22.29■■□□□ 1.16
LINC00535-201ENST00000501400 EIF5P55010 431 aaKnown RBP22.29■■□□□ 1.16
LINC00535-201ENST00000501400 CCDC8Q9H0W5 538 aaPredicted RBP22.29■■□□□ 1.16
LINC00535-201ENST00000501400 IL25Q9H293 177 aa22.29■■□□□ 1.16
LINC00535-201ENST00000501400 CCDC87Q9NVE4 849 aa22.29■■□□□ 1.16
LINC00535-201ENST00000501400 SNX21Q969T3 373 aa22.28■■□□□ 1.16
LINC00535-201ENST00000501400 ARXQ96QS3 562 aa22.28■■□□□ 1.16
LINC00535-201ENST00000501400 BTAF1O14981 1849 aa22.28■■□□□ 1.16
LINC00535-201ENST00000501400 NLRP10Q86W26 655 aa22.27■■□□□ 1.16
LINC00535-201ENST00000501400 DZIP3Q86Y13 1208 aaKnown RBP22.27■■□□□ 1.16
LINC00535-201ENST00000501400 GPATCH3Q96I76 525 aa22.27■■□□□ 1.16
LINC00535-201ENST00000501400 CHMP3Q9Y3E7 222 aa22.27■■□□□ 1.16
LINC00535-201ENST00000501400 MYH3P11055 1940 aa22.27■■□□□ 1.16
LINC00535-201ENST00000501400 GPTP24298 496 aa22.27■■□□□ 1.16
LINC00535-201ENST00000501400 TFCP2Q12800 502 aa22.27■■□□□ 1.16
LINC00535-201ENST00000501400 CNTROBQ8N137 903 aa22.27■■□□□ 1.16
LINC00535-201ENST00000501400 ZBTB38Q8NAP3 1195 aaPredicted RBP22.27■■□□□ 1.16
LINC00535-201ENST00000501400 ERVV-1B6SEH8 477 aa22.26■■□□□ 1.15
LINC00535-201ENST00000501400 HSP90AB3PQ58FF7 597 aa22.26■■□□□ 1.15
LINC00535-201ENST00000501400 FAM89AQ96GI7 184 aa22.26■■□□□ 1.15
LINC00535-201ENST00000501400 PLA2G12BQ9BX93 195 aa22.26■■□□□ 1.15
LINC00535-201ENST00000501400 TBC1D2BQ9UPU7 963 aa22.26■■□□□ 1.15
LINC00535-201ENST00000501400 BCORQ6W2J9 1755 aa22.26■■□□□ 1.15
LINC00535-201ENST00000501400 CD2BP2O95400 341 aaKnown RBP22.25■■□□□ 1.15
LINC00535-201ENST00000501400 TNNI3KQ59H18 835 aa22.25■■□□□ 1.15
LINC00535-201ENST00000501400 ATG9AQ7Z3C6 839 aa22.25■■□□□ 1.15
LINC00535-201ENST00000501400 SMARCC1Q92922 1105 aaPredicted RBP22.25■■□□□ 1.15
LINC00535-201ENST00000501400 FPGT-TNNI3KV9GXZ4 949 aa22.25■■□□□ 1.15
LINC00535-201ENST00000501400 UBN2Q6ZU65 1347 aa22.25■■□□□ 1.15
LINC00535-201ENST00000501400 CDHR2Q9BYE9 1310 aa22.25■■□□□ 1.15
LINC00535-201ENST00000501400 PTF1AQ7RTS3 328 aa22.25■■□□□ 1.15
LINC00535-201ENST00000501400 HSCBQ8IWL3 235 aa22.24■■□□□ 1.15
LINC00535-201ENST00000501400 SYNE4Q8N205 404 aa22.24■■□□□ 1.15
LINC00535-201ENST00000501400 ANTXR1Q9H6X2 564 aa22.24■■□□□ 1.15
LINC00535-201ENST00000501400 DBNLQ9UJU6 430 aaKnown RBP22.24■■□□□ 1.15
LINC00535-201ENST00000501400 MYT1Q01538 1121 aa22.23■■□□□ 1.15
LINC00535-201ENST00000501400 AFF2P51816 1311 aa22.23■■□□□ 1.15
LINC00535-201ENST00000501400 ATRNO75882 1429 aa22.23■■□□□ 1.15
LINC00535-201ENST00000501400 NBR1Q14596 966 aa22.22■■□□□ 1.15
LINC00535-201ENST00000501400 ZNF34Q8IZ26 560 aa22.22■■□□□ 1.15
LINC00535-201ENST00000501400 ZNF594Q96JF6 807 aaPredicted RBP22.22■■□□□ 1.15
LINC00535-201ENST00000501400 SBF2Q86WG5 1849 aa22.22■■□□□ 1.15
LINC00535-201ENST00000501400 MEX3CQ5U5Q3 659 aaKnown RBP22.21■■□□□ 1.15
LINC00535-201ENST00000501400 SLKQ9H2G2 1235 aaPredicted RBP22.21■■□□□ 1.15
LINC00535-201ENST00000501400 CSF1RP07333 972 aa22.21■■□□□ 1.15
LINC00535-201ENST00000501400 LRRC24Q50LG9 513 aa22.21■■□□□ 1.15
LINC00535-201ENST00000501400 GJD4Q96KN9 370 aaPredicted RBP22.21■■□□□ 1.15
LINC00535-201ENST00000501400 ZNF609O15014 1411 aa22.21■■□□□ 1.15
LINC00535-201ENST00000501400 EYA2O00167 538 aa22.2■■□□□ 1.14
LINC00535-201ENST00000501400 SGSM2O43147 1006 aa22.2■■□□□ 1.14
LINC00535-201ENST00000501400 CAMTA2O94983 1202 aa22.2■■□□□ 1.14
LINC00535-201ENST00000501400 RABEP1Q15276 862 aa22.2■■□□□ 1.14
LINC00535-201ENST00000501400 ANO2Q9NQ90 1003 aa22.2■■□□□ 1.14
LINC00535-201ENST00000501400 CIAO1O76071 339 aa22.19■■□□□ 1.14
LINC00535-201ENST00000501400 LINC00116Q8NCU8 138 aa22.19■■□□□ 1.14
LINC00535-201ENST00000501400 EVI5LQ96CN4 794 aa22.19■■□□□ 1.14
LINC00535-201ENST00000501400 IL15P40933 162 aaPredicted RBP22.19■■□□□ 1.14
LINC00535-201ENST00000501400 DBNDD2Q9BQY9 259 aa22.19■■□□□ 1.14
LINC00535-201ENST00000501400 PUS3Q9BZE2 481 aaKnown RBP22.19■■□□□ 1.14
LINC00535-201ENST00000501400 BOLA2Q9H3K6 86 aa22.18■■□□□ 1.14
LINC00535-201ENST00000501400 LAMB2P55268 1798 aa22.18■■□□□ 1.14
LINC00535-201ENST00000501400 LRP5O75197 1615 aa22.18■■□□□ 1.14
LINC00535-201ENST00000501400 LY75O60449 1722 aa22.18■■□□□ 1.14
LINC00535-201ENST00000501400 DDX60Q8IY21 1712 aaKnown RBP22.18■■□□□ 1.14
LINC00535-201ENST00000501400 FAM182BQ5T319 152 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms