RNA–Protein interactions for RNA: ENST00000498787.1

PARP1-209, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 628 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-209ENST00000498787 CDHR2Q9BYE9 1310 aa17.85■□□□□ 0.45
PARP1-209ENST00000498787 CNTNAP4Q9C0A0 1308 aa17.85■□□□□ 0.45
PARP1-209ENST00000498787 FBXO3Q9UK99 471 aa17.85■□□□□ 0.45
PARP1-209ENST00000498787 SALL3Q9BXA9 1300 aa17.84■□□□□ 0.45
PARP1-209ENST00000498787 IFIT2P09913 472 aaKnown RBP17.84■□□□□ 0.45
PARP1-209ENST00000498787 FAM196AQ6ZSG2 479 aa17.84■□□□□ 0.45
PARP1-209ENST00000498787 ITPK1Q13572 414 aa17.83■□□□□ 0.44
PARP1-209ENST00000498787 CLEC4GQ6UXB4 293 aa17.83■□□□□ 0.44
PARP1-209ENST00000498787 BCL11BQ9C0K0 894 aaPredicted RBP17.83■□□□□ 0.44
PARP1-209ENST00000498787 TJP1Q07157 1748 aa17.83■□□□□ 0.44
PARP1-209ENST00000498787 NUP188Q5SRE5 1749 aa17.83■□□□□ 0.44
PARP1-209ENST00000498787 KAT6BQ8WYB5 2073 aa17.83■□□□□ 0.44
PARP1-209ENST00000498787 LMBR1LQ6UX01 489 aa17.82■□□□□ 0.44
PARP1-209ENST00000498787 NLRP10Q86W26 655 aa17.82■□□□□ 0.44
PARP1-209ENST00000498787 USP42Q9H9J4 1324 aaKnown RBP17.81■□□□□ 0.44
PARP1-209ENST00000498787 GLRX3O76003 335 aaKnown RBP17.81■□□□□ 0.44
PARP1-209ENST00000498787 GSPT1P15170 499 aaKnown RBP17.81■□□□□ 0.44
PARP1-209ENST00000498787 RBM6P78332 1123 aaKnown RBP17.81■□□□□ 0.44
PARP1-209ENST00000498787 FOXO4P98177 505 aa17.81■□□□□ 0.44
PARP1-209ENST00000498787 EPHA10Q5JZY3 1008 aa17.81■□□□□ 0.44
PARP1-209ENST00000498787 ZNF34Q8IZ26 560 aa17.81■□□□□ 0.44
PARP1-209ENST00000498787 BCL11AQ9H165 835 aa17.81■□□□□ 0.44
PARP1-209ENST00000498787 IL1RAPL2Q9NP60 686 aa17.81■□□□□ 0.44
PARP1-209ENST00000498787 DAXXQ9UER7 740 aaPredicted RBP17.81■□□□□ 0.44
PARP1-209ENST00000498787 SDSP20132 328 aa17.8■□□□□ 0.44
PARP1-209ENST00000498787 RFX5P48382 616 aaPredicted RBP17.8■□□□□ 0.44
PARP1-209ENST00000498787 CCDC57Q2TAC2 916 aa17.8■□□□□ 0.44
PARP1-209ENST00000498787 KRT27Q7Z3Y8 459 aa17.8■□□□□ 0.44
PARP1-209ENST00000498787 OTUD7AQ8TE49 926 aaPredicted RBP17.8■□□□□ 0.44
PARP1-209ENST00000498787 CCNL1Q9UK58 526 aaPredicted RBP17.8■□□□□ 0.44
PARP1-209ENST00000498787 TBC1D2BQ9UPU7 963 aa17.8■□□□□ 0.44
PARP1-209ENST00000498787 PA2G4Q9UQ80 394 aaKnown RBP17.8■□□□□ 0.44
PARP1-209ENST00000498787 CHMP3Q9Y3E7 222 aa17.8■□□□□ 0.44
PARP1-209ENST00000498787 NHSQ6T4R5 1651 aa17.8■□□□□ 0.44
PARP1-209ENST00000498787 AFDNP55196 1824 aaKnown RBP17.79■□□□□ 0.44
PARP1-209ENST00000498787 CIAO1O76071 339 aa17.79■□□□□ 0.44
PARP1-209ENST00000498787 IL15P40933 162 aaPredicted RBP17.79■□□□□ 0.44
PARP1-209ENST00000498787 PTPN12Q05209 780 aaKnown RBP17.79■□□□□ 0.44
PARP1-209ENST00000498787 HLFQ16534 295 aa17.79■□□□□ 0.44
PARP1-209ENST00000498787 TBC1D9Q6ZT07 1266 aa17.79■□□□□ 0.44
PARP1-209ENST00000498787 TBC1D32Q96NH3 1257 aa17.79■□□□□ 0.44
PARP1-209ENST00000498787 ECHDC1Q9NTX5 307 aa17.79■□□□□ 0.44
PARP1-209ENST00000498787 TRMT112Q9UI30 125 aaKnown RBP17.79■□□□□ 0.44
PARP1-209ENST00000498787 RREB1Q92766 1687 aa17.78■□□□□ 0.44
PARP1-209ENST00000498787 RPS6KA4O75676 772 aa17.78■□□□□ 0.44
PARP1-209ENST00000498787 MFAP1P55081 439 aaKnown RBP17.78■□□□□ 0.44
PARP1-209ENST00000498787 CNTROBQ8N137 903 aa17.78■□□□□ 0.44
PARP1-209ENST00000498787 C22orf23Q9BZE7 217 aa17.78■□□□□ 0.44
PARP1-209ENST00000498787 GPR108Q9NPR9 543 aa17.78■□□□□ 0.44
PARP1-209ENST00000498787 TRIM6-TRIM34B2RNG4 842 aa17.77■□□□□ 0.44
PARP1-209ENST00000498787 PDE8AO60658 829 aa17.77■□□□□ 0.44
PARP1-209ENST00000498787 CAMTA2O94983 1202 aa17.77■□□□□ 0.44
PARP1-209ENST00000498787 REC8O95072 547 aa17.77■□□□□ 0.44
PARP1-209ENST00000498787 CSF1RP07333 972 aa17.77■□□□□ 0.44
PARP1-209ENST00000498787 BECN1Q14457 450 aa17.77■□□□□ 0.44
PARP1-209ENST00000498787 AACSQ86V21 672 aa17.77■□□□□ 0.44
PARP1-209ENST00000498787 NUTM1Q86Y26 1132 aa17.77■□□□□ 0.44
PARP1-209ENST00000498787 LINC00116Q8NCU8 138 aa17.77■□□□□ 0.44
PARP1-209ENST00000498787 JARID2Q92833 1246 aaPredicted RBP17.77■□□□□ 0.44
PARP1-209ENST00000498787 UTP14AQ9BVJ6 771 aaKnown RBP17.77■□□□□ 0.44
PARP1-209ENST00000498787 SH3TC1Q8TE82 1336 aa17.76■□□□□ 0.43
PARP1-209ENST00000498787 IRS4O14654 1257 aaPredicted RBP17.76■□□□□ 0.43
PARP1-209ENST00000498787 SASH1O94885 1247 aa17.76■□□□□ 0.43
PARP1-209ENST00000498787 SEC24BO95487 1268 aa17.76■□□□□ 0.43
PARP1-209ENST00000498787 GPTP24298 496 aa17.76■□□□□ 0.43
PARP1-209ENST00000498787 IFIT5Q13325 482 aaKnown RBP17.76■□□□□ 0.43
PARP1-209ENST00000498787 TAF7LQ5H9L4 462 aa17.76■□□□□ 0.43
PARP1-209ENST00000498787 SLC27A3Q5K4L6 730 aa17.76■□□□□ 0.43
PARP1-209ENST00000498787 SIL1Q9H173 461 aa17.76■□□□□ 0.43
PARP1-209ENST00000498787 RTCBQ9Y3I0 505 aaKnown RBP17.76■□□□□ 0.43
PARP1-209ENST00000498787 EYA2O00167 538 aa17.75■□□□□ 0.43
PARP1-209ENST00000498787 EPB41L2O43491 1005 aaKnown RBP17.75■□□□□ 0.43
PARP1-209ENST00000498787 FAM89AQ96GI7 184 aa17.75■□□□□ 0.43
PARP1-209ENST00000498787 ANKRD18BA2A2Z9 1011 aa17.74■□□□□ 0.43
PARP1-209ENST00000498787 ADRA2BP18089 450 aa17.74■□□□□ 0.43
PARP1-209ENST00000498787 RBM25P49756 843 aaKnown RBP17.74■□□□□ 0.43
PARP1-209ENST00000498787 CTSWP56202 376 aa17.74■□□□□ 0.43
PARP1-209ENST00000498787 ERICH6Q7L0X2 663 aa17.74■□□□□ 0.43
PARP1-209ENST00000498787 AKAP2Q9Y2D5 859 aa17.74■□□□□ 0.43
PARP1-209ENST00000498787 HIP1O00291 1037 aa17.73■□□□□ 0.43
PARP1-209ENST00000498787 ZPR1O75312 459 aa17.73■□□□□ 0.43
PARP1-209ENST00000498787 RTL5Q5HYW3 569 aaPredicted RBP17.73■□□□□ 0.43
PARP1-209ENST00000498787 TICAM2Q86XR7 235 aa17.73■□□□□ 0.43
PARP1-209ENST00000498787 PI4K2BQ8TCG2 481 aa17.73■□□□□ 0.43
PARP1-209ENST00000498787 RILPL2Q969X0 211 aa17.73■□□□□ 0.43
PARP1-209ENST00000498787 CEP126Q9P2H0 1117 aa17.73■□□□□ 0.43
PARP1-209ENST00000498787 NARFQ9UHQ1 456 aa17.73■□□□□ 0.43
PARP1-209ENST00000498787 NIP7Q9Y221 180 aaKnown RBP eCLIP17.73■□□□□ 0.43
PARP1-209ENST00000498787 TNNI3KQ59H18 835 aa17.72■□□□□ 0.43
PARP1-209ENST00000498787 IL27Q8NEV9 243 aa17.72■□□□□ 0.43
PARP1-209ENST00000498787 RUFY2Q8WXA3 655 aa17.72■□□□□ 0.43
PARP1-209ENST00000498787 NYXQ9GZU5 481 aa17.72■□□□□ 0.43
PARP1-209ENST00000498787 FPGT-TNNI3KV9GXZ4 949 aa17.72■□□□□ 0.43
PARP1-209ENST00000498787 TTLL11Q8NHH1 800 aa17.71■□□□□ 0.43
PARP1-209ENST00000498787 KLHDC4Q8TBB5 520 aa17.71■□□□□ 0.43
PARP1-209ENST00000498787 EAF2Q96CJ1 260 aaPredicted RBP17.71■□□□□ 0.43
PARP1-209ENST00000498787 EVI5LQ96CN4 794 aa17.71■□□□□ 0.43
PARP1-209ENST00000498787 BTAF1O14981 1849 aa17.7■□□□□ 0.42
PARP1-209ENST00000498787 COL5A3P25940 1745 aaPredicted RBP17.7■□□□□ 0.42
PARP1-209ENST00000498787 GNPATO15228 680 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms