RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 HSP90AA1P07900 732 aaKnown RBP7.75□□□□□ -1.17
SSBP1-213ENST00000496622 SLC24A3Q9HC58 644 aa7.75□□□□□ -1.17
SSBP1-213ENST00000496622 OS9Q13438 667 aaPredicted RBP7.74□□□□□ -1.17
SSBP1-213ENST00000496622 TWISTNBQ3B726 338 aaPredicted RBP7.74□□□□□ -1.17
SSBP1-213ENST00000496622 ITPRIPQ8IWB1 547 aa7.74□□□□□ -1.17
SSBP1-213ENST00000496622 IGSF5Q9NSI5 407 aa7.74□□□□□ -1.17
SSBP1-213ENST00000496622 TOPAZ1Q8N9V7 1692 aa7.74□□□□□ -1.17
SSBP1-213ENST00000496622 AKAP12Q02952 1782 aa7.74□□□□□ -1.17
SSBP1-213ENST00000496622 IRF6O14896 467 aa7.74□□□□□ -1.17
SSBP1-213ENST00000496622 ZNF853P0CG23 659 aa7.74□□□□□ -1.17
SSBP1-213ENST00000496622 TMEM57Q8N5G2 664 aa7.74□□□□□ -1.17
SSBP1-213ENST00000496622 KRI1Q8N9T8 703 aaKnown RBP7.74□□□□□ -1.17
SSBP1-213ENST00000496622 REPIN1Q9BWE0 567 aaKnown RBP7.74□□□□□ -1.17
SSBP1-213ENST00000496622 ITSN1Q15811 1721 aa7.74□□□□□ -1.17
SSBP1-213ENST00000496622 IGSF1Q8N6C5 1336 aa7.74□□□□□ -1.17
SSBP1-213ENST00000496622 PIK3C2AO00443 1686 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 NRKQ7Z2Y5 1582 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 C1orf167Q5SNV9 1468 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 ANKRD26Q9UPS8 1709 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 PDE3AQ14432 1141 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 ZKSCAN2Q63HK3 967 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 DZIP1LQ8IYY4 767 aaKnown RBP7.73□□□□□ -1.17
SSBP1-213ENST00000496622 IL17REQ8NFR9 667 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 C1orf115Q9H7X2 142 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 LGR6Q9HBX8 967 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 PTMSP20962 102 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 MCCP23508 829 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 GNAI1P63096 354 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 MAP2K5Q13163 448 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 ATF7IPQ6VMQ6 1270 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 ARHGEF25Q86VW2 580 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 RTF1Q92541 710 aaKnown RBP7.73□□□□□ -1.17
SSBP1-213ENST00000496622 IP6K1Q92551 441 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 ZNF428Q96B54 188 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 IFT57Q9NWB7 429 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 KDM2BQ8NHM5 1336 aa7.73□□□□□ -1.17
SSBP1-213ENST00000496622 MPRIPQ6WCQ1 1025 aa7.72□□□□□ -1.17
SSBP1-213ENST00000496622 FAM43AQ8N2R8 423 aa7.72□□□□□ -1.17
SSBP1-213ENST00000496622 IL16Q14005 1332 aa7.72□□□□□ -1.17
SSBP1-213ENST00000496622 GOLGB1Q14789 3259 aaKnown RBP7.72□□□□□ -1.17
SSBP1-213ENST00000496622 SOWAHBA6NEL2 793 aa7.72□□□□□ -1.17
SSBP1-213ENST00000496622 BRINP3Q76B58 766 aa7.72□□□□□ -1.17
SSBP1-213ENST00000496622 ANKK1Q8NFD2 765 aa7.72□□□□□ -1.17
SSBP1-213ENST00000496622 HDAC5Q9UQL6 1122 aa7.72□□□□□ -1.17
SSBP1-213ENST00000496622 AHDC1Q5TGY3 1603 aaPredicted RBP7.72□□□□□ -1.17
SSBP1-213ENST00000496622 CLGNO14967 610 aa7.71□□□□□ -1.17
SSBP1-213ENST00000496622 ANKRD24Q8TF21 1146 aa7.71□□□□□ -1.17
SSBP1-213ENST00000496622 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.71□□□□□ -1.17
SSBP1-213ENST00000496622 TSPYL4Q9UJ04 414 aa7.71□□□□□ -1.17
SSBP1-213ENST00000496622 NOP58Q9Y2X3 529 aaKnown RBP7.71□□□□□ -1.17
SSBP1-213ENST00000496622 COL16A1Q07092 1604 aaPredicted RBP7.71□□□□□ -1.18
SSBP1-213ENST00000496622 CHL1O00533 1208 aa7.71□□□□□ -1.18
SSBP1-213ENST00000496622 KCNQ3O43525 872 aa7.71□□□□□ -1.18
SSBP1-213ENST00000496622 MDM2Q00987 491 aaPredicted RBP7.71□□□□□ -1.18
SSBP1-213ENST00000496622 MVPQ14764 893 aaKnown RBP7.71□□□□□ -1.18
SSBP1-213ENST00000496622 BARGINQ6ZT62 677 aa7.71□□□□□ -1.18
SSBP1-213ENST00000496622 KCNH5Q8NCM2 988 aa7.71□□□□□ -1.18
SSBP1-213ENST00000496622 RBM46Q8TBY0 533 aaKnown RBP7.71□□□□□ -1.18
SSBP1-213ENST00000496622 LRCH3Q96II8 777 aa7.71□□□□□ -1.18
SSBP1-213ENST00000496622 TMEM134Q9H6X4 195 aa7.71□□□□□ -1.18
SSBP1-213ENST00000496622 SLAIN2Q9P270 581 aa7.71□□□□□ -1.18
SSBP1-213ENST00000496622 HPS5Q9UPZ3 1129 aa7.71□□□□□ -1.18
SSBP1-213ENST00000496622 FMN2Q9NZ56 1722 aa7.71□□□□□ -1.18
SSBP1-213ENST00000496622 IRX3P78415 501 aaPredicted RBP7.7□□□□□ -1.18
SSBP1-213ENST00000496622 NLRP2Q9NX02 1062 aa7.7□□□□□ -1.18
SSBP1-213ENST00000496622 KDRP35968 1356 aa7.7□□□□□ -1.18
SSBP1-213ENST00000496622 MST1RQ04912 1400 aa7.7□□□□□ -1.18
SSBP1-213ENST00000496622 GNAT3A8MTJ3 354 aa7.7□□□□□ -1.18
SSBP1-213ENST00000496622 F6X3S4 739 aa7.7□□□□□ -1.18
SSBP1-213ENST00000496622 LMOD3Q0VAK6 560 aa7.7□□□□□ -1.18
SSBP1-213ENST00000496622 G2E3Q7L622 706 aa7.7□□□□□ -1.18
SSBP1-213ENST00000496622 DCCP43146 1447 aa7.7□□□□□ -1.18
SSBP1-213ENST00000496622 APLP1P51693 650 aa7.69□□□□□ -1.18
SSBP1-213ENST00000496622 SF3B2Q13435 895 aaKnown RBP7.69□□□□□ -1.18
SSBP1-213ENST00000496622 MSH6P52701 1360 aa7.69□□□□□ -1.18
SSBP1-213ENST00000496622 ANXA1P04083 346 aa7.69□□□□□ -1.18
SSBP1-213ENST00000496622 SLC10A3P09131 477 aa7.69□□□□□ -1.18
SSBP1-213ENST00000496622 CSB-PGBD3P0DP91 1061 aa7.69□□□□□ -1.18
SSBP1-213ENST00000496622 CENPQQ7L2Z9 268 aaPredicted RBP7.69□□□□□ -1.18
SSBP1-213ENST00000496622 LAPTM4BQ86VI4 370 aa7.69□□□□□ -1.18
SSBP1-213ENST00000496622 ARHGEF10O15013 1369 aa7.69□□□□□ -1.18
SSBP1-213ENST00000496622 SRCAPQ6ZRS2 3230 aa7.68□□□□□ -1.18
SSBP1-213ENST00000496622 PRAMEF22A3QJZ6 481 aa7.68□□□□□ -1.18
SSBP1-213ENST00000496622 GAS2L2Q8NHY3 880 aa7.68□□□□□ -1.18
SSBP1-213ENST00000496622 AFF2P51816 1311 aa7.68□□□□□ -1.18
SSBP1-213ENST00000496622 EIF2S2P20042 333 aaKnown RBP7.68□□□□□ -1.18
SSBP1-213ENST00000496622 DNAJB2P25686 324 aa7.68□□□□□ -1.18
SSBP1-213ENST00000496622 MMP14P50281 582 aa7.68□□□□□ -1.18
SSBP1-213ENST00000496622 ANAPC15P60006 121 aa7.68□□□□□ -1.18
SSBP1-213ENST00000496622 ZNF530Q6P9A1 599 aaPredicted RBP7.68□□□□□ -1.18
SSBP1-213ENST00000496622 SLC4A10Q6U841 1118 aa7.68□□□□□ -1.18
SSBP1-213ENST00000496622 JMYQ8N9B5 988 aa7.68□□□□□ -1.18
SSBP1-213ENST00000496622 ARID3AQ99856 593 aa7.68□□□□□ -1.18
SSBP1-213ENST00000496622 CRB1P82279 1406 aa7.67□□□□□ -1.18
SSBP1-213ENST00000496622 NPHP3Q7Z494 1330 aa7.67□□□□□ -1.18
SSBP1-213ENST00000496622 DDX11L8A8MPP1 907 aa7.67□□□□□ -1.18
SSBP1-213ENST00000496622 ZNF622Q969S3 477 aaKnown RBP eCLIP7.67□□□□□ -1.18
SSBP1-213ENST00000496622 KIAA0232Q92628 1395 aa7.67□□□□□ -1.18
SSBP1-213ENST00000496622 OATP04181 439 aa7.67□□□□□ -1.18
SSBP1-213ENST00000496622 APPP05067 770 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms