RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 PANK1Q8TE04 598 aa27.49■■□□□ 1.99
C9orf3-222ENST00000496567 NYXQ9GZU5 481 aa27.49■■□□□ 1.99
C9orf3-222ENST00000496567 PARP3Q9Y6F1 533 aa27.49■■□□□ 1.99
C9orf3-222ENST00000496567 IBTKQ9P2D0 1353 aaPredicted RBP27.49■■□□□ 1.99
C9orf3-222ENST00000496567 GCKRQ14397 625 aa27.48■■□□□ 1.99
C9orf3-222ENST00000496567 POLRMTO00411 1230 aaKnown RBP27.48■■□□□ 1.99
C9orf3-222ENST00000496567 SUSD4Q5VX71 490 aa27.48■■□□□ 1.99
C9orf3-222ENST00000496567 NBPF5PQ86XG9 351 aaPredicted RBP27.48■■□□□ 1.99
C9orf3-222ENST00000496567 UTP14AQ9BVJ6 771 aaKnown RBP27.48■■□□□ 1.99
C9orf3-222ENST00000496567 ATF5Q9Y2D1 282 aaPredicted RBP27.48■■□□□ 1.99
C9orf3-222ENST00000496567 COL24A1Q17RW2 1714 aa27.47■■□□□ 1.99
C9orf3-222ENST00000496567 POLD1P28340 1107 aa27.47■■□□□ 1.99
C9orf3-222ENST00000496567 DDR1Q08345 913 aa27.47■■□□□ 1.99
C9orf3-222ENST00000496567 TPTE2Q6XPS3 522 aa27.47■■□□□ 1.99
C9orf3-222ENST00000496567 TRMT112Q9UI30 125 aaKnown RBP27.47■■□□□ 1.99
C9orf3-222ENST00000496567 FAM177BA6PVY3 158 aa27.46■■□□□ 1.99
C9orf3-222ENST00000496567 SERPINB2P05120 415 aa27.46■■□□□ 1.99
C9orf3-222ENST00000496567 ITPRIPQ8IWB1 547 aa27.46■■□□□ 1.99
C9orf3-222ENST00000496567 C20orf194Q5TEA3 1177 aa27.45■■□□□ 1.99
C9orf3-222ENST00000496567 NPHP1O15259 732 aa27.44■■□□□ 1.98
C9orf3-222ENST00000496567 ZBTB38Q8NAP3 1195 aaPredicted RBP27.44■■□□□ 1.98
C9orf3-222ENST00000496567 C9orf78Q9NZ63 289 aaPredicted RBP27.44■■□□□ 1.98
C9orf3-222ENST00000496567 NTSR2O95665 410 aa27.43■■□□□ 1.98
C9orf3-222ENST00000496567 PCCAP05165 728 aaPredicted RBP27.43■■□□□ 1.98
C9orf3-222ENST00000496567 GTF2E1P29083 439 aaPredicted RBP27.43■■□□□ 1.98
C9orf3-222ENST00000496567 MVPQ14764 893 aaKnown RBP27.43■■□□□ 1.98
C9orf3-222ENST00000496567 SPON1Q9HCB6 807 aa27.43■■□□□ 1.98
C9orf3-222ENST00000496567 GRM8O00222 908 aa27.43■■□□□ 1.98
C9orf3-222ENST00000496567 CNBD1Q8NA66 436 aa27.43■■□□□ 1.98
C9orf3-222ENST00000496567 COG6Q9Y2V7 657 aa27.43■■□□□ 1.98
C9orf3-222ENST00000496567 SH3TC1Q8TE82 1336 aa27.42■■□□□ 1.98
C9orf3-222ENST00000496567 H7C1W4 665 aa27.41■■□□□ 1.98
C9orf3-222ENST00000496567 FAM89AQ96GI7 184 aa27.4■■□□□ 1.98
C9orf3-222ENST00000496567 USP44Q9H0E7 712 aa27.4■■□□□ 1.98
C9orf3-222ENST00000496567 DDX19BQ9UMR2 479 aa27.4■■□□□ 1.98
C9orf3-222ENST00000496567 HSP90B1P14625 803 aaKnown RBP27.39■■□□□ 1.98
C9orf3-222ENST00000496567 ST5P78524 1137 aa27.39■■□□□ 1.98
C9orf3-222ENST00000496567 PRR5LQ6MZQ0 368 aa27.39■■□□□ 1.98
C9orf3-222ENST00000496567 SGIP1Q9BQI5 828 aa27.39■■□□□ 1.98
C9orf3-222ENST00000496567 CHMP4BQ9H444 224 aaKnown RBP27.39■■□□□ 1.98
C9orf3-222ENST00000496567 NRXN2Q9P2S2 1712 aa27.39■■□□□ 1.98
C9orf3-222ENST00000496567 UTYO14607 1347 aa27.39■■□□□ 1.98
C9orf3-222ENST00000496567 GNAI3P08754 354 aa27.39■■□□□ 1.97
C9orf3-222ENST00000496567 UBE3BQ7Z3V4 1068 aa27.39■■□□□ 1.97
C9orf3-222ENST00000496567 NUTM1Q86Y26 1132 aa27.39■■□□□ 1.97
C9orf3-222ENST00000496567 CDHR2Q9BYE9 1310 aa27.38■■□□□ 1.97
C9orf3-222ENST00000496567 PTGER2P43116 358 aa27.38■■□□□ 1.97
C9orf3-222ENST00000496567 RTL5Q5HYW3 569 aaPredicted RBP27.38■■□□□ 1.97
C9orf3-222ENST00000496567 HDAC5Q9UQL6 1122 aa27.38■■□□□ 1.97
C9orf3-222ENST00000496567 ERFEQ4G0M1 354 aa27.37■■□□□ 1.97
C9orf3-222ENST00000496567 NBPF7P0C2Y1 421 aaPredicted RBP27.36■■□□□ 1.97
C9orf3-222ENST00000496567 UBTFL1P0CB47 393 aaPredicted RBP27.36■■□□□ 1.97
C9orf3-222ENST00000496567 MEIS3Q99687 375 aa27.36■■□□□ 1.97
C9orf3-222ENST00000496567 IRS4O14654 1257 aaPredicted RBP27.35■■□□□ 1.97
C9orf3-222ENST00000496567 ZBTB7BO15156 539 aaPredicted RBP27.35■■□□□ 1.97
C9orf3-222ENST00000496567 CASP7P55210 303 aa27.35■■□□□ 1.97
C9orf3-222ENST00000496567 SLC10A5Q5PT55 438 aa27.35■■□□□ 1.97
C9orf3-222ENST00000496567 JARID2Q92833 1246 aaPredicted RBP27.35■■□□□ 1.97
C9orf3-222ENST00000496567 SYNE4Q8N205 404 aa27.35■■□□□ 1.97
C9orf3-222ENST00000496567 RIC1Q4ADV7 1423 aa27.33■■□□□ 1.97
C9orf3-222ENST00000496567 ABCC12Q96J65 1359 aa27.32■■□□□ 1.96
C9orf3-222ENST00000496567 CCDC24Q8N4L8 307 aa27.32■■□□□ 1.96
C9orf3-222ENST00000496567 CRBNQ96SW2 442 aa27.32■■□□□ 1.96
C9orf3-222ENST00000496567 BRIP1Q9BX63 1249 aa27.32■■□□□ 1.96
C9orf3-222ENST00000496567 PDE8AO60658 829 aa27.31■■□□□ 1.96
C9orf3-222ENST00000496567 HCLS1P14317 486 aaPredicted RBP27.31■■□□□ 1.96
C9orf3-222ENST00000496567 PLA2G12BQ9BX93 195 aa27.31■■□□□ 1.96
C9orf3-222ENST00000496567 NLRP3Q96P20 1036 aa27.31■■□□□ 1.96
C9orf3-222ENST00000496567 GNAI2P04899 355 aa27.3■■□□□ 1.96
C9orf3-222ENST00000496567 SUCLG2Q96I99 432 aa27.3■■□□□ 1.96
C9orf3-222ENST00000496567 C10orf71Q711Q0 1435 aa27.29■■□□□ 1.96
C9orf3-222ENST00000496567 LAMB2P55268 1798 aa27.29■■□□□ 1.96
C9orf3-222ENST00000496567 DDX60Q8IY21 1712 aaKnown RBP27.28■■□□□ 1.96
C9orf3-222ENST00000496567 NEFLP07196 543 aa27.28■■□□□ 1.96
C9orf3-222ENST00000496567 PDE6BP35913 854 aa27.28■■□□□ 1.96
C9orf3-222ENST00000496567 IRX6P78412 446 aaPredicted RBP27.28■■□□□ 1.96
C9orf3-222ENST00000496567 ZBTB40Q9NUA8 1239 aa27.28■■□□□ 1.96
C9orf3-222ENST00000496567 AAMPQ13685 434 aa27.26■■□□□ 1.96
C9orf3-222ENST00000496567 PDZRN3Q9UPQ7 1066 aa27.26■■□□□ 1.96
C9orf3-222ENST00000496567 LRRFIP2Q9Y608 721 aaKnown RBP27.26■■□□□ 1.96
C9orf3-222ENST00000496567 CTSWP56202 376 aa27.26■■□□□ 1.95
C9orf3-222ENST00000496567 KAZALD1Q96I82 304 aa27.26■■□□□ 1.95
C9orf3-222ENST00000496567 KLRG2A4D1S0 409 aaPredicted RBP27.25■■□□□ 1.95
C9orf3-222ENST00000496567 FOXO4P98177 505 aa27.25■■□□□ 1.95
C9orf3-222ENST00000496567 BICC1Q9H694 974 aaKnown RBP27.25■■□□□ 1.95
C9orf3-222ENST00000496567 CD2APQ9Y5K6 639 aa27.25■■□□□ 1.95
C9orf3-222ENST00000496567 ANKRD31Q8N7Z5 1873 aa27.24■■□□□ 1.95
C9orf3-222ENST00000496567 SF3B3Q15393 1217 aaKnown RBP27.24■■□□□ 1.95
C9orf3-222ENST00000496567 PPP1R1BQ9UD71 204 aaPredicted RBP27.24■■□□□ 1.95
C9orf3-222ENST00000496567 MYH3P11055 1940 aa27.24■■□□□ 1.95
C9orf3-222ENST00000496567 CCDC152Q4G0S7 254 aa27.23■■□□□ 1.95
C9orf3-222ENST00000496567 EPHA10Q5JZY3 1008 aa27.23■■□□□ 1.95
C9orf3-222ENST00000496567 EXOC6Q8TAG9 804 aa27.23■■□□□ 1.95
C9orf3-222ENST00000496567 KIF13BQ9NQT8 1826 aa27.23■■□□□ 1.95
C9orf3-222ENST00000496567 TNRC6CQ9HCJ0 1690 aaKnown RBP27.23■■□□□ 1.95
C9orf3-222ENST00000496567 CSF1RP07333 972 aa27.22■■□□□ 1.95
C9orf3-222ENST00000496567 RABL6Q3YEC7 729 aaPredicted RBP27.22■■□□□ 1.95
C9orf3-222ENST00000496567 CRY2Q49AN0 593 aa27.22■■□□□ 1.95
C9orf3-222ENST00000496567 TTLL11Q8NHH1 800 aa27.22■■□□□ 1.95
C9orf3-222ENST00000496567 LMBR1LQ6UX01 489 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms