RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 VSIG10Q8N0Z9 540 aa10.96□□□□□ -0.66
TM9SF4-207ENST00000495749 NBPF15Q8N660 670 aa10.96□□□□□ -0.66
TM9SF4-207ENST00000495749 NOL7Q9UMY1 257 aaKnown RBP10.96□□□□□ -0.66
TM9SF4-207ENST00000495749 BRD1O95696 1058 aa10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 SLFNL1Q499Z3 407 aa10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 CERKQ8TCT0 537 aa10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 TCEANC2Q96MN5 208 aa10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 DIAPH3Q9NSV4 1193 aa10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 ASAP1Q9ULH1 1129 aa10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 R3HCC1Q9Y3T6 440 aaKnown RBP10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 MED1Q15648 1581 aaPredicted RBP10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 KCNJ4P48050 445 aa10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 HS1BP3Q53T59 392 aa10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 ZNF594Q96JF6 807 aaPredicted RBP10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 NEUROD6Q96NK8 337 aa10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 GDPD2Q9HCC8 539 aa10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 RAB11FIP3O75154 756 aa10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 MCM2P49736 904 aa10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 LMBR1LQ6UX01 489 aa10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 SYNE4Q8N205 404 aa10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 FAM227BQ96M60 508 aa10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.95□□□□□ -0.66
TM9SF4-207ENST00000495749 ALDH1L1O75891 902 aa10.94□□□□□ -0.66
TM9SF4-207ENST00000495749 MBD3O95983 291 aa10.94□□□□□ -0.66
TM9SF4-207ENST00000495749 IL2RBP14784 551 aa10.94□□□□□ -0.66
TM9SF4-207ENST00000495749 PIP4K2BP78356 416 aa10.94□□□□□ -0.66
TM9SF4-207ENST00000495749 RASEFQ8IZ41 740 aa10.94□□□□□ -0.66
TM9SF4-207ENST00000495749 DNAJC2Q99543 621 aaKnown RBP10.94□□□□□ -0.66
TM9SF4-207ENST00000495749 TNS3Q68CZ2 1445 aa10.94□□□□□ -0.66
TM9SF4-207ENST00000495749 GPTP24298 496 aa10.94□□□□□ -0.66
TM9SF4-207ENST00000495749 CUL4AQ13619 759 aa10.94□□□□□ -0.66
TM9SF4-207ENST00000495749 COL9A3Q14050 684 aaPredicted RBP10.94□□□□□ -0.66
TM9SF4-207ENST00000495749 METTL22Q9BUU2 404 aaPredicted RBP10.94□□□□□ -0.66
TM9SF4-207ENST00000495749 PTH1RQ03431 593 aa10.93□□□□□ -0.66
TM9SF4-207ENST00000495749 TFCP2Q12800 502 aa10.93□□□□□ -0.66
TM9SF4-207ENST00000495749 CNTROBQ8N137 903 aa10.93□□□□□ -0.66
TM9SF4-207ENST00000495749 RGPD5Q99666 1765 aa10.93□□□□□ -0.66
TM9SF4-207ENST00000495749 RBM10P98175 930 aaKnown RBP10.93□□□□□ -0.66
TM9SF4-207ENST00000495749 ECHDC1Q9NTX5 307 aa10.93□□□□□ -0.66
TM9SF4-207ENST00000495749 STAP2Q9UGK3 403 aa10.93□□□□□ -0.66
TM9SF4-207ENST00000495749 WDR17Q8IZU2 1322 aa10.93□□□□□ -0.66
TM9SF4-207ENST00000495749 TIMM10P62072 90 aa10.93□□□□□ -0.66
TM9SF4-207ENST00000495749 PRPF40BQ6NWY9 871 aaKnown RBP10.93□□□□□ -0.66
TM9SF4-207ENST00000495749 CHMP4AQ9BY43 222 aa10.93□□□□□ -0.66
TM9SF4-207ENST00000495749 ZKSCAN5Q9Y2L8 839 aa10.93□□□□□ -0.66
TM9SF4-207ENST00000495749 ZNF500O60304 480 aaPredicted RBP10.92□□□□□ -0.66
TM9SF4-207ENST00000495749 ANAPC15P60006 121 aa10.92□□□□□ -0.66
TM9SF4-207ENST00000495749 DNAJC10Q8IXB1 793 aa10.92□□□□□ -0.66
TM9SF4-207ENST00000495749 INTS4Q96HW7 963 aaKnown RBP10.92□□□□□ -0.66
TM9SF4-207ENST00000495749 FSD1Q9BTV5 496 aa10.92□□□□□ -0.66
TM9SF4-207ENST00000495749 BCL11BQ9C0K0 894 aaPredicted RBP10.92□□□□□ -0.66
TM9SF4-207ENST00000495749 GADD45BO75293 160 aaPredicted RBP10.92□□□□□ -0.66
TM9SF4-207ENST00000495749 ACSBG1Q96GR2 724 aa10.92□□□□□ -0.66
TM9SF4-207ENST00000495749 TAOK2Q9UL54 1235 aa10.92□□□□□ -0.66
TM9SF4-207ENST00000495749 HSP90AB4PQ58FF6 505 aa10.91□□□□□ -0.66
TM9SF4-207ENST00000495749 FAM89AQ96GI7 184 aa10.91□□□□□ -0.66
TM9SF4-207ENST00000495749 TSPY26PQ9H489 355 aa10.91□□□□□ -0.66
TM9SF4-207ENST00000495749 TMOD3Q9NYL9 352 aa10.91□□□□□ -0.66
TM9SF4-207ENST00000495749 PPFIA3O75145 1194 aa10.91□□□□□ -0.66
TM9SF4-207ENST00000495749 GLRX3O76003 335 aaKnown RBP10.91□□□□□ -0.66
TM9SF4-207ENST00000495749 PTMAP06454 111 aaKnown RBP10.91□□□□□ -0.66
TM9SF4-207ENST00000495749 ADCK5Q3MIX3 580 aa10.9□□□□□ -0.66
TM9SF4-207ENST00000495749 CCDC129Q6ZRS4 1044 aa10.9□□□□□ -0.66
TM9SF4-207ENST00000495749 DDX46Q7L014 1031 aaKnown RBP10.9□□□□□ -0.66
TM9SF4-207ENST00000495749 USP48Q86UV5 1035 aa10.9□□□□□ -0.66
TM9SF4-207ENST00000495749 MPNDQ8N594 471 aa10.9□□□□□ -0.66
TM9SF4-207ENST00000495749 SEC62Q99442 399 aaKnown RBP10.9□□□□□ -0.66
TM9SF4-207ENST00000495749 DBNDD2Q9BQY9 259 aa10.9□□□□□ -0.66
TM9SF4-207ENST00000495749 FAM13BQ9NYF5 915 aa10.9□□□□□ -0.66
TM9SF4-207ENST00000495749 CCDC39Q9UFE4 941 aa10.9□□□□□ -0.66
TM9SF4-207ENST00000495749 HEG1Q9ULI3 1381 aa10.9□□□□□ -0.66
TM9SF4-207ENST00000495749 SGSM2O43147 1006 aa10.9□□□□□ -0.66
TM9SF4-207ENST00000495749 KCNQ4P56696 695 aa10.9□□□□□ -0.66
TM9SF4-207ENST00000495749 SYAP1Q96A49 352 aaPredicted RBP10.9□□□□□ -0.66
TM9SF4-207ENST00000495749 TAF6LQ9Y6J9 622 aa10.9□□□□□ -0.66
TM9SF4-207ENST00000495749 SLIT3O75094 1523 aa10.9□□□□□ -0.67
TM9SF4-207ENST00000495749 CASTP20810 708 aaKnown RBP10.9□□□□□ -0.67
TM9SF4-207ENST00000495749 NMIQ13287 307 aaPredicted RBP10.9□□□□□ -0.67
TM9SF4-207ENST00000495749 PIGBQ92521 554 aa10.9□□□□□ -0.67
TM9SF4-207ENST00000495749 PUS3Q9BZE2 481 aaKnown RBP10.9□□□□□ -0.67
TM9SF4-207ENST00000495749 PDCL3Q9H2J4 239 aa10.9□□□□□ -0.67
TM9SF4-207ENST00000495749 SNRKQ9NRH2 765 aa10.9□□□□□ -0.67
TM9SF4-207ENST00000495749 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.9□□□□□ -0.67
TM9SF4-207ENST00000495749 TCHHQ07283 1943 aa10.89□□□□□ -0.67
TM9SF4-207ENST00000495749 LRRC24Q50LG9 513 aa10.89□□□□□ -0.67
TM9SF4-207ENST00000495749 LRP10Q7Z4F1 713 aa10.89□□□□□ -0.67
TM9SF4-207ENST00000495749 TBC1D2BQ9UPU7 963 aa10.89□□□□□ -0.67
TM9SF4-207ENST00000495749 PTPN12Q05209 780 aaKnown RBP10.89□□□□□ -0.67
TM9SF4-207ENST00000495749 SMIM5Q71RC9 77 aa10.89□□□□□ -0.67
TM9SF4-207ENST00000495749 GPATCH3Q96I76 525 aa10.89□□□□□ -0.67
TM9SF4-207ENST00000495749 JAKMIP1Q96N16 626 aaKnown RBP10.89□□□□□ -0.67
TM9SF4-207ENST00000495749 SOS2Q07890 1332 aaPredicted RBP10.89□□□□□ -0.67
TM9SF4-207ENST00000495749 PCDH11XQ9BZA7 1347 aa10.89□□□□□ -0.67
TM9SF4-207ENST00000495749 PCDH11YQ9BZA8 1340 aa10.89□□□□□ -0.67
TM9SF4-207ENST00000495749 GOLGB1Q14789 3259 aaKnown RBP10.88□□□□□ -0.67
TM9SF4-207ENST00000495749 A0A0D9SFI3 127 aa10.88□□□□□ -0.67
TM9SF4-207ENST00000495749 HSPA4P34932 840 aa10.88□□□□□ -0.67
TM9SF4-207ENST00000495749 ZMYND15Q9H091 742 aa10.88□□□□□ -0.67
TM9SF4-207ENST00000495749 DBNLQ9UJU6 430 aaKnown RBP10.88□□□□□ -0.67
TM9SF4-207ENST00000495749 SNX14Q9Y5W7 946 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms