RNA–Protein interactions for RNA: ENST00000494819.5

GTF2B-207, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 893 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-207ENST00000494819 CST9Q5W186 159 aa13.51□□□□□ -0.25
GTF2B-207ENST00000494819 NPM2Q86SE8 214 aaKnown RBP13.51□□□□□ -0.25
GTF2B-207ENST00000494819 BEGAINQ9BUH8 593 aa13.51□□□□□ -0.25
GTF2B-207ENST00000494819 MCOLN1Q9GZU1 580 aa13.51□□□□□ -0.25
GTF2B-207ENST00000494819 USP16Q9Y5T5 823 aa13.51□□□□□ -0.25
GTF2B-207ENST00000494819 GJA3Q9Y6H8 435 aa13.51□□□□□ -0.25
GTF2B-207ENST00000494819 COL3A1P02461 1466 aaPredicted RBP13.5□□□□□ -0.25
GTF2B-207ENST00000494819 FAM177BA6PVY3 158 aa13.5□□□□□ -0.25
GTF2B-207ENST00000494819 EPS15P42566 896 aa13.5□□□□□ -0.25
GTF2B-207ENST00000494819 CFAP44Q96MT7 982 aa13.5□□□□□ -0.25
GTF2B-207ENST00000494819 KNSTRNQ9Y448 316 aa13.5□□□□□ -0.25
GTF2B-207ENST00000494819 TLL2Q9Y6L7 1015 aa13.5□□□□□ -0.25
GTF2B-207ENST00000494819 CEMIPQ8WUJ3 1361 aa13.49□□□□□ -0.25
GTF2B-207ENST00000494819 ABCC12Q96J65 1359 aa13.49□□□□□ -0.25
GTF2B-207ENST00000494819 GNAT3A8MTJ3 354 aa13.49□□□□□ -0.25
GTF2B-207ENST00000494819 DIAPH1O60610 1272 aaKnown RBP13.49□□□□□ -0.25
GTF2B-207ENST00000494819 CLEC4GQ6UXB4 293 aa13.49□□□□□ -0.25
GTF2B-207ENST00000494819 PSMD1Q99460 953 aa13.49□□□□□ -0.25
GTF2B-207ENST00000494819 LMOD1P29536 600 aaPredicted RBP13.48□□□□□ -0.25
GTF2B-207ENST00000494819 EIF6P56537 245 aaKnown RBP13.48□□□□□ -0.25
GTF2B-207ENST00000494819 JDP2Q8WYK2 163 aa13.48□□□□□ -0.25
GTF2B-207ENST00000494819 NIP7Q9Y221 180 aaKnown RBP eCLIP13.48□□□□□ -0.25
GTF2B-207ENST00000494819 EIF4G2P78344 907 aaKnown RBP eCLIP13.47□□□□□ -0.25
GTF2B-207ENST00000494819 TPTE2Q6XPS3 522 aa13.47□□□□□ -0.25
GTF2B-207ENST00000494819 GAS2L2Q8NHY3 880 aa13.47□□□□□ -0.25
GTF2B-207ENST00000494819 ZNF652Q9Y2D9 606 aa13.47□□□□□ -0.25
GTF2B-207ENST00000494819 TNRC18O15417 2968 aaPredicted RBP13.47□□□□□ -0.25
GTF2B-207ENST00000494819 BTBD11A6QL63 1104 aa13.46□□□□□ -0.25
GTF2B-207ENST00000494819 NBPF26B4DH59 902 aa13.46□□□□□ -0.25
GTF2B-207ENST00000494819 ALDH1B1P30837 517 aa13.46□□□□□ -0.25
GTF2B-207ENST00000494819 MAP2K2P36507 400 aa13.46□□□□□ -0.25
GTF2B-207ENST00000494819 HLFQ16534 295 aa13.46□□□□□ -0.25
GTF2B-207ENST00000494819 CRY2Q49AN0 593 aa13.46□□□□□ -0.25
GTF2B-207ENST00000494819 NBPF10Q6P3W6 841 aaKnown RBP13.46□□□□□ -0.25
GTF2B-207ENST00000494819 USP50Q70EL3 339 aaPredicted RBP13.46□□□□□ -0.25
GTF2B-207ENST00000494819 NBPF15Q8N660 670 aa13.46□□□□□ -0.25
GTF2B-207ENST00000494819 DGKZQ13574 1117 aa13.45□□□□□ -0.26
GTF2B-207ENST00000494819 SAPCD2Q86UD0 394 aa13.45□□□□□ -0.26
GTF2B-207ENST00000494819 TRPM7Q96QT4 1865 aa13.44□□□□□ -0.26
GTF2B-207ENST00000494819 U2SURPO15042 1029 aaKnown RBP13.44□□□□□ -0.26
GTF2B-207ENST00000494819 CELF2O95319 508 aaKnown RBP13.44□□□□□ -0.26
GTF2B-207ENST00000494819 NUTM1Q86Y26 1132 aa13.44□□□□□ -0.26
GTF2B-207ENST00000494819 LARGE2Q8N3Y3 721 aa13.44□□□□□ -0.26
GTF2B-207ENST00000494819 RTN4Q9NQC3 1192 aaKnown RBP13.44□□□□□ -0.26
GTF2B-207ENST00000494819 TIMELESSQ9UNS1 1208 aa13.44□□□□□ -0.26
GTF2B-207ENST00000494819 RIC1Q4ADV7 1423 aa13.44□□□□□ -0.26
GTF2B-207ENST00000494819 CA12O43570 354 aa13.43□□□□□ -0.26
GTF2B-207ENST00000494819 BRPF1P55201 1214 aaPredicted RBP13.43□□□□□ -0.26
GTF2B-207ENST00000494819 ZIC5Q96T25 663 aa13.43□□□□□ -0.26
GTF2B-207ENST00000494819 GLIS2Q9BZE0 524 aaPredicted RBP13.43□□□□□ -0.26
GTF2B-207ENST00000494819 RGL2O15211 777 aa13.42□□□□□ -0.26
GTF2B-207ENST00000494819 SNRPA1P09661 255 aaKnown RBP13.42□□□□□ -0.26
GTF2B-207ENST00000494819 CC2D2BQ6DHV5 1058 aa13.42□□□□□ -0.26
GTF2B-207ENST00000494819 CIAPIN1Q6FI81 312 aa13.42□□□□□ -0.26
GTF2B-207ENST00000494819 PHACTR3Q96KR7 559 aa13.42□□□□□ -0.26
GTF2B-207ENST00000494819 ADARB2Q9NS39 739 aaKnown RBP13.42□□□□□ -0.26
GTF2B-207ENST00000494819 GPRC5DQ9NZD1 345 aa13.42□□□□□ -0.26
GTF2B-207ENST00000494819 GTF2E1P29083 439 aaPredicted RBP13.41□□□□□ -0.26
GTF2B-207ENST00000494819 CC2D1BQ5T0F9 858 aaKnown RBP13.41□□□□□ -0.26
GTF2B-207ENST00000494819 NIM1KQ8IY84 436 aa13.41□□□□□ -0.26
GTF2B-207ENST00000494819 SPDYE1Q8NFV5 336 aaPredicted RBP13.41□□□□□ -0.26
GTF2B-207ENST00000494819 HHIPL1Q96JK4 782 aa13.41□□□□□ -0.26
GTF2B-207ENST00000494819 TCERG1O14776 1098 aaKnown RBP13.4□□□□□ -0.26
GTF2B-207ENST00000494819 HOXA10P31260 410 aaPredicted RBP13.4□□□□□ -0.26
GTF2B-207ENST00000494819 SOX10P56693 466 aa13.4□□□□□ -0.26
GTF2B-207ENST00000494819 AOC3Q16853 763 aa13.4□□□□□ -0.26
GTF2B-207ENST00000494819 RPGRQ92834 1020 aaKnown RBP13.4□□□□□ -0.26
GTF2B-207ENST00000494819 ZNF408Q9H9D4 720 aa13.4□□□□□ -0.26
GTF2B-207ENST00000494819 NPC1L1Q9UHC9 1359 aa13.4□□□□□ -0.26
GTF2B-207ENST00000494819 CASP8AP2Q9UKL3 1982 aa13.4□□□□□ -0.27
GTF2B-207ENST00000494819 UBN2Q6ZU65 1347 aa13.39□□□□□ -0.27
GTF2B-207ENST00000494819 PPEF1O14829 653 aaPredicted RBP13.39□□□□□ -0.27
GTF2B-207ENST00000494819 PPIP5K2O43314 1243 aa13.39□□□□□ -0.27
GTF2B-207ENST00000494819 PRKAR2BP31323 418 aa13.39□□□□□ -0.27
GTF2B-207ENST00000494819 C3orf67Q6ZVT6 689 aa13.39□□□□□ -0.27
GTF2B-207ENST00000494819 MCM10Q7L590 875 aa13.39□□□□□ -0.27
GTF2B-207ENST00000494819 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
GTF2B-207ENST00000494819 KIF7Q2M1P5 1343 aa13.39□□□□□ -0.27
GTF2B-207ENST00000494819 PER1O15534 1290 aaPredicted RBP13.38□□□□□ -0.27
GTF2B-207ENST00000494819 GMPSP49915 693 aaPredicted RBP13.38□□□□□ -0.27
GTF2B-207ENST00000494819 HIRAP54198 1017 aaPredicted RBP13.38□□□□□ -0.27
GTF2B-207ENST00000494819 CXCL9Q07325 125 aa13.38□□□□□ -0.27
GTF2B-207ENST00000494819 TRPM4Q8TD43 1214 aa13.38□□□□□ -0.27
GTF2B-207ENST00000494819 NYXQ9GZU5 481 aa13.38□□□□□ -0.27
GTF2B-207ENST00000494819 RSPH6AQ9H0K4 717 aa13.38□□□□□ -0.27
GTF2B-207ENST00000494819 PGAP2Q9UHJ9 254 aa13.38□□□□□ -0.27
GTF2B-207ENST00000494819 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
GTF2B-207ENST00000494819 IBTKQ9P2D0 1353 aaPredicted RBP13.37□□□□□ -0.27
GTF2B-207ENST00000494819 SHTN1A0MZ66 631 aa13.37□□□□□ -0.27
GTF2B-207ENST00000494819 GPTP24298 496 aa13.37□□□□□ -0.27
GTF2B-207ENST00000494819 DCTN1Q14203 1278 aa13.37□□□□□ -0.27
GTF2B-207ENST00000494819 DLK2Q6UY11 383 aa13.37□□□□□ -0.27
GTF2B-207ENST00000494819 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
GTF2B-207ENST00000494819 NGEFQ8N5V2 710 aa13.37□□□□□ -0.27
GTF2B-207ENST00000494819 NOGQ13253 232 aa13.36□□□□□ -0.27
GTF2B-207ENST00000494819 GRIPAP1Q4V328 841 aa13.36□□□□□ -0.27
GTF2B-207ENST00000494819 SUSD4Q5VX71 490 aa13.36□□□□□ -0.27
GTF2B-207ENST00000494819 TTLL7Q6ZT98 887 aa13.36□□□□□ -0.27
GTF2B-207ENST00000494819 IFNLR1Q8IU57 520 aaPredicted RBP13.36□□□□□ -0.27
GTF2B-207ENST00000494819 CRAMP1Q96RY5 1269 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms