RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 NLRP10Q86W26 655 aa16.36■□□□□ 0.21
CLIP2-209ENST00000493166 UTP14AQ9BVJ6 771 aaKnown RBP16.36■□□□□ 0.21
CLIP2-209ENST00000493166 PIM2Q9P1W9 311 aa16.36■□□□□ 0.21
CLIP2-209ENST00000493166 BCS1LQ9Y276 419 aa16.36■□□□□ 0.21
CLIP2-209ENST00000493166 MYH3P11055 1940 aa16.35■□□□□ 0.21
CLIP2-209ENST00000493166 FKBP5Q13451 457 aaPredicted RBP16.35■□□□□ 0.21
CLIP2-209ENST00000493166 ERFEQ4G0M1 354 aa16.35■□□□□ 0.21
CLIP2-209ENST00000493166 KSR2Q6VAB6 950 aa16.35■□□□□ 0.21
CLIP2-209ENST00000493166 MYD88Q99836 296 aa16.35■□□□□ 0.21
CLIP2-209ENST00000493166 ISCA1Q9BUE6 129 aa16.35■□□□□ 0.21
CLIP2-209ENST00000493166 MAP3K2Q9Y2U5 619 aa16.35■□□□□ 0.21
CLIP2-209ENST00000493166 RNF123Q5XPI4 1314 aa16.35■□□□□ 0.21
CLIP2-209ENST00000493166 ZBED9Q6R2W3 1325 aa16.35■□□□□ 0.21
CLIP2-209ENST00000493166 SLX4Q8IY92 1834 aa16.35■□□□□ 0.21
CLIP2-209ENST00000493166 ADCY9O60503 1353 aa16.35■□□□□ 0.21
CLIP2-209ENST00000493166 RIC1Q4ADV7 1423 aa16.35■□□□□ 0.21
CLIP2-209ENST00000493166 PI4KAP2A4QPH2 592 aa16.34■□□□□ 0.21
CLIP2-209ENST00000493166 GRIN3BO60391 1043 aa16.34■□□□□ 0.21
CLIP2-209ENST00000493166 DALRD3Q5D0E6 543 aaKnown RBP16.34■□□□□ 0.21
CLIP2-209ENST00000493166 PI4KAP1Q8N8J0 262 aa16.34■□□□□ 0.21
CLIP2-209ENST00000493166 ZNF622Q969S3 477 aaKnown RBP eCLIP16.34■□□□□ 0.21
CLIP2-209ENST00000493166 METTL22Q9BUU2 404 aaPredicted RBP16.34■□□□□ 0.21
CLIP2-209ENST00000493166 TRMT112Q9UI30 125 aaKnown RBP16.34■□□□□ 0.21
CLIP2-209ENST00000493166 ZNF428Q96B54 188 aa16.33■□□□□ 0.2
CLIP2-209ENST00000493166 CCDC88AQ3V6T2 1871 aa16.33■□□□□ 0.2
CLIP2-209ENST00000493166 SRGNP10124 158 aa16.32■□□□□ 0.2
CLIP2-209ENST00000493166 NEXNQ0ZGT2 675 aa16.32■□□□□ 0.2
CLIP2-209ENST00000493166 TRIM28Q13263 835 aaKnown RBP16.32■□□□□ 0.2
CLIP2-209ENST00000493166 TTLL6Q8N841 843 aa16.32■□□□□ 0.2
CLIP2-209ENST00000493166 SH3TC1Q8TE82 1336 aa16.32■□□□□ 0.2
CLIP2-209ENST00000493166 TAF1P21675 1872 aa16.31■□□□□ 0.2
CLIP2-209ENST00000493166 CT47B1P0C2W7 299 aaPredicted RBP16.31■□□□□ 0.2
CLIP2-209ENST00000493166 STYK1Q6J9G0 422 aa16.31■□□□□ 0.2
CLIP2-209ENST00000493166 MASTLQ96GX5 879 aa16.31■□□□□ 0.2
CLIP2-209ENST00000493166 SBF1O95248 1867 aa16.31■□□□□ 0.2
CLIP2-209ENST00000493166 KLRG2A4D1S0 409 aaPredicted RBP16.3■□□□□ 0.2
CLIP2-209ENST00000493166 NPR1P16066 1061 aa16.3■□□□□ 0.2
CLIP2-209ENST00000493166 CCDC191Q8NCU4 936 aa16.3■□□□□ 0.2
CLIP2-209ENST00000493166 DNAAF4Q8WXU2 420 aa16.3■□□□□ 0.2
CLIP2-209ENST00000493166 SSH1Q8WYL5 1049 aa16.3■□□□□ 0.2
CLIP2-209ENST00000493166 CNKSR1Q969H4 720 aa16.3■□□□□ 0.2
CLIP2-209ENST00000493166 CWC25Q9NXE8 425 aaPredicted RBP16.3■□□□□ 0.2
CLIP2-209ENST00000493166 FER1L6Q2WGJ9 1857 aa16.3■□□□□ 0.2
CLIP2-209ENST00000493166 YY1P25490 414 aa16.29■□□□□ 0.2
CLIP2-209ENST00000493166 ALDH1L2Q3SY69 923 aa16.29■□□□□ 0.2
CLIP2-209ENST00000493166 SLC10A5Q5PT55 438 aa16.29■□□□□ 0.2
CLIP2-209ENST00000493166 SYNE4Q8N205 404 aa16.29■□□□□ 0.2
CLIP2-209ENST00000493166 MRPL50Q8N5N7 158 aaKnown RBP16.29■□□□□ 0.2
CLIP2-209ENST00000493166 RPGRQ92834 1020 aaKnown RBP16.29■□□□□ 0.2
CLIP2-209ENST00000493166 FAM89AQ96GI7 184 aa16.29■□□□□ 0.2
CLIP2-209ENST00000493166 NLRP3Q96P20 1036 aa16.29■□□□□ 0.2
CLIP2-209ENST00000493166 BCL2L13Q9BXK5 485 aa16.29■□□□□ 0.2
CLIP2-209ENST00000493166 SMC4Q9NTJ3 1288 aa16.29■□□□□ 0.2
CLIP2-209ENST00000493166 IGKV5-2P06315 115 aa16.28■□□□□ 0.2
CLIP2-209ENST00000493166 HCLS1P14317 486 aaPredicted RBP16.28■□□□□ 0.2
CLIP2-209ENST00000493166 CRY2Q49AN0 593 aa16.28■□□□□ 0.2
CLIP2-209ENST00000493166 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
CLIP2-209ENST00000493166 ZBTB38Q8NAP3 1195 aaPredicted RBP16.28■□□□□ 0.2
CLIP2-209ENST00000493166 NEURL1BA8MQ27 555 aa16.27■□□□□ 0.2
CLIP2-209ENST00000493166 F6X3S4 739 aa16.27■□□□□ 0.2
CLIP2-209ENST00000493166 CWF19L2Q2TBE0 894 aaKnown RBP16.27■□□□□ 0.2
CLIP2-209ENST00000493166 PRPF40BQ6NWY9 871 aaKnown RBP16.27■□□□□ 0.2
CLIP2-209ENST00000493166 ARHGAP27Q6ZUM4 889 aa16.27■□□□□ 0.2
CLIP2-209ENST00000493166 SPEF2Q9C093 1822 aa16.26■□□□□ 0.19
CLIP2-209ENST00000493166 PTPRCP08575 1304 aa16.26■□□□□ 0.19
CLIP2-209ENST00000493166 IRS4O14654 1257 aaPredicted RBP16.26■□□□□ 0.19
CLIP2-209ENST00000493166 PCCAP05165 728 aaPredicted RBP16.26■□□□□ 0.19
CLIP2-209ENST00000493166 ALDH1B1P30837 517 aa16.26■□□□□ 0.19
CLIP2-209ENST00000493166 C3orf67Q6ZVT6 689 aa16.26■□□□□ 0.19
CLIP2-209ENST00000493166 DICER1Q9UPY3 1922 aaKnown RBP16.25■□□□□ 0.19
CLIP2-209ENST00000493166 HSP90B1P14625 803 aaKnown RBP16.25■□□□□ 0.19
CLIP2-209ENST00000493166 LINS1Q8NG48 757 aa16.25■□□□□ 0.19
CLIP2-209ENST00000493166 RBM17Q96I25 401 aaKnown RBP16.25■□□□□ 0.19
CLIP2-209ENST00000493166 ZNF219Q9P2Y4 722 aaPredicted RBP16.25■□□□□ 0.19
CLIP2-209ENST00000493166 C21orf2O43822 256 aa16.24■□□□□ 0.19
CLIP2-209ENST00000493166 HOXA10P31260 410 aaPredicted RBP16.24■□□□□ 0.19
CLIP2-209ENST00000493166 RARSP54136 660 aaKnown RBP16.24■□□□□ 0.19
CLIP2-209ENST00000493166 SLC4A10Q6U841 1118 aa16.24■□□□□ 0.19
CLIP2-209ENST00000493166 JARID2Q92833 1246 aaPredicted RBP16.24■□□□□ 0.19
CLIP2-209ENST00000493166 TIAM2Q8IVF5 1701 aa16.23■□□□□ 0.19
CLIP2-209ENST00000493166 GCKRQ14397 625 aa16.23■□□□□ 0.19
CLIP2-209ENST00000493166 CRAMP1Q96RY5 1269 aa16.23■□□□□ 0.19
CLIP2-209ENST00000493166 CDHR2Q9BYE9 1310 aa16.22■□□□□ 0.19
CLIP2-209ENST00000493166 BEND3Q5T5X7 828 aa16.22■□□□□ 0.19
CLIP2-209ENST00000493166 SOGA3Q5TF21 947 aa16.22■□□□□ 0.19
CLIP2-209ENST00000493166 DDX46Q7L014 1031 aaKnown RBP16.22■□□□□ 0.19
CLIP2-209ENST00000493166 UBE3BQ7Z3V4 1068 aa16.22■□□□□ 0.19
CLIP2-209ENST00000493166 ABCC4O15439 1325 aa16.21■□□□□ 0.19
CLIP2-209ENST00000493166 PDE8AO60658 829 aa16.21■□□□□ 0.19
CLIP2-209ENST00000493166 BRPF1P55201 1214 aaPredicted RBP16.21■□□□□ 0.19
CLIP2-209ENST00000493166 SRCIN1Q9C0H9 1055 aa16.21■□□□□ 0.19
CLIP2-209ENST00000493166 LRRC37AA6NMS7 1700 aa16.21■□□□□ 0.19
CLIP2-209ENST00000493166 KIF16BQ96L93 1317 aa16.2■□□□□ 0.18
CLIP2-209ENST00000493166 H7C1W4 665 aa16.2■□□□□ 0.18
CLIP2-209ENST00000493166 PPEF1O14829 653 aaPredicted RBP16.2■□□□□ 0.18
CLIP2-209ENST00000493166 RASSF7Q02833 373 aa16.2■□□□□ 0.18
CLIP2-209ENST00000493166 SF3B3Q15393 1217 aaKnown RBP16.2■□□□□ 0.18
CLIP2-209ENST00000493166 NOB1Q9ULX3 412 aaKnown RBP16.2■□□□□ 0.18
CLIP2-209ENST00000493166 ALDH1L1O75891 902 aa16.19■□□□□ 0.18
CLIP2-209ENST00000493166 CCDC93Q567U6 631 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms