RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 TCIRG1Q13488 830 aa17.2■□□□□ 0.34
PTPN7-216ENST00000492977 TSHZ3Q63HK5 1081 aa17.2■□□□□ 0.34
PTPN7-216ENST00000492977 SLC4A9Q96Q91 983 aa17.2■□□□□ 0.34
PTPN7-216ENST00000492977 COPRSQ9NQ92 184 aa17.2■□□□□ 0.34
PTPN7-216ENST00000492977 FNBP4Q8N3X1 1017 aaPredicted RBP17.19■□□□□ 0.34
PTPN7-216ENST00000492977 PI4K2BQ8TCG2 481 aa17.19■□□□□ 0.34
PTPN7-216ENST00000492977 ISCA1Q9BUE6 129 aa17.19■□□□□ 0.34
PTPN7-216ENST00000492977 BCL9LQ86UU0 1499 aa17.19■□□□□ 0.34
PTPN7-216ENST00000492977 TRIM6-TRIM34B2RNG4 842 aa17.19■□□□□ 0.34
PTPN7-216ENST00000492977 ERC2O15083 957 aa17.19■□□□□ 0.34
PTPN7-216ENST00000492977 GPATCH3Q96I76 525 aa17.19■□□□□ 0.34
PTPN7-216ENST00000492977 C8orf37Q96NL8 207 aa17.19■□□□□ 0.34
PTPN7-216ENST00000492977 USP26Q9BXU7 913 aa17.19■□□□□ 0.34
PTPN7-216ENST00000492977 TBC1D2Q9BYX2 928 aa17.19■□□□□ 0.34
PTPN7-216ENST00000492977 GLRX3O76003 335 aaKnown RBP17.18■□□□□ 0.34
PTPN7-216ENST00000492977 SASH1O94885 1247 aa17.18■□□□□ 0.34
PTPN7-216ENST00000492977 IFIT2P09913 472 aaKnown RBP17.18■□□□□ 0.34
PTPN7-216ENST00000492977 RFX5P48382 616 aaPredicted RBP17.18■□□□□ 0.34
PTPN7-216ENST00000492977 JARID2Q92833 1246 aaPredicted RBP17.18■□□□□ 0.34
PTPN7-216ENST00000492977 RILPL2Q969X0 211 aa17.18■□□□□ 0.34
PTPN7-216ENST00000492977 MAP3K15Q6ZN16 1313 aa17.18■□□□□ 0.34
PTPN7-216ENST00000492977 FOXO4P98177 505 aa17.17■□□□□ 0.34
PTPN7-216ENST00000492977 CERKQ8TCT0 537 aa17.17■□□□□ 0.34
PTPN7-216ENST00000492977 SNX21Q969T3 373 aa17.17■□□□□ 0.34
PTPN7-216ENST00000492977 TJP1Q07157 1748 aa17.17■□□□□ 0.34
PTPN7-216ENST00000492977 CHMLP26374 656 aa17.16■□□□□ 0.34
PTPN7-216ENST00000492977 PTPN12Q05209 780 aaKnown RBP17.16■□□□□ 0.34
PTPN7-216ENST00000492977 GIGYF2Q6Y7W6 1299 aaKnown RBP17.16■□□□□ 0.34
PTPN7-216ENST00000492977 KIF2CQ99661 725 aa17.16■□□□□ 0.34
PTPN7-216ENST00000492977 ECHDC1Q9NTX5 307 aa17.16■□□□□ 0.34
PTPN7-216ENST00000492977 ZNF330Q9Y3S2 320 aaPredicted RBP17.16■□□□□ 0.34
PTPN7-216ENST00000492977 IL6STP40189 918 aaPredicted RBP17.15■□□□□ 0.34
PTPN7-216ENST00000492977 HSP90AB3PQ58FF7 597 aa17.15■□□□□ 0.34
PTPN7-216ENST00000492977 LMBR1LQ6UX01 489 aa17.15■□□□□ 0.34
PTPN7-216ENST00000492977 AACSQ86V21 672 aa17.15■□□□□ 0.34
PTPN7-216ENST00000492977 FAM98CQ17RN3 349 aaKnown RBP17.15■□□□□ 0.34
PTPN7-216ENST00000492977 CNTROBQ8N137 903 aa17.15■□□□□ 0.34
PTPN7-216ENST00000492977 SMARCC1Q92922 1105 aaPredicted RBP17.15■□□□□ 0.34
PTPN7-216ENST00000492977 ACSBG1Q96GR2 724 aa17.15■□□□□ 0.34
PTPN7-216ENST00000492977 ESYT1Q9BSJ8 1104 aa17.15■□□□□ 0.34
PTPN7-216ENST00000492977 SIL1Q9H173 461 aa17.15■□□□□ 0.34
PTPN7-216ENST00000492977 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.14■□□□□ 0.33
PTPN7-216ENST00000492977 ERVV-1B6SEH8 477 aa17.14■□□□□ 0.33
PTPN7-216ENST00000492977 HSCBQ8IWL3 235 aa17.14■□□□□ 0.33
PTPN7-216ENST00000492977 KLHDC4Q8TBB5 520 aa17.14■□□□□ 0.33
PTPN7-216ENST00000492977 EAF2Q96CJ1 260 aaPredicted RBP17.14■□□□□ 0.33
PTPN7-216ENST00000492977 ZBTB1Q9Y2K1 713 aa17.14■□□□□ 0.33
PTPN7-216ENST00000492977 AK9Q5TCS8 1911 aa17.14■□□□□ 0.33
PTPN7-216ENST00000492977 CICQ96RK0 1608 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-216ENST00000492977 PCCAP05165 728 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-216ENST00000492977 LOC102724428A0A0B4J2F2 783 aa17.12■□□□□ 0.33
PTPN7-216ENST00000492977 EPB41L2O43491 1005 aaKnown RBP17.12■□□□□ 0.33
PTPN7-216ENST00000492977 SIK1P57059 783 aa17.12■□□□□ 0.33
PTPN7-216ENST00000492977 ZBTB38Q8NAP3 1195 aaPredicted RBP17.12■□□□□ 0.33
PTPN7-216ENST00000492977 PLA2G12BQ9BX93 195 aa17.12■□□□□ 0.33
PTPN7-216ENST00000492977 USP21Q9UK80 565 aa17.12■□□□□ 0.33
PTPN7-216ENST00000492977 ATP6V1AP38606 617 aa17.11■□□□□ 0.33
PTPN7-216ENST00000492977 PLCB2Q00722 1185 aa17.11■□□□□ 0.33
PTPN7-216ENST00000492977 RABEP1Q15276 862 aa17.11■□□□□ 0.33
PTPN7-216ENST00000492977 ARXQ96QS3 562 aa17.11■□□□□ 0.33
PTPN7-216ENST00000492977 CCDC87Q9NVE4 849 aa17.11■□□□□ 0.33
PTPN7-216ENST00000492977 A0A0G2JS52 829 aa17.11■□□□□ 0.33
PTPN7-216ENST00000492977 RTL5Q5HYW3 569 aaPredicted RBP17.11■□□□□ 0.33
PTPN7-216ENST00000492977 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.11■□□□□ 0.33
PTPN7-216ENST00000492977 PALLDQ8WX93 1383 aa17.1■□□□□ 0.33
PTPN7-216ENST00000492977 CDHR2Q9BYE9 1310 aa17.1■□□□□ 0.33
PTPN7-216ENST00000492977 EIF5P55010 431 aaKnown RBP17.1■□□□□ 0.33
PTPN7-216ENST00000492977 HLFQ16534 295 aa17.1■□□□□ 0.33
PTPN7-216ENST00000492977 INTS5Q6P9B9 1019 aaKnown RBP17.1■□□□□ 0.33
PTPN7-216ENST00000492977 DZIP3Q86Y13 1208 aaKnown RBP17.1■□□□□ 0.33
PTPN7-216ENST00000492977 CHMP3Q9Y3E7 222 aa17.1■□□□□ 0.33
PTPN7-216ENST00000492977 ANKRD36CQ5JPF3 1778 aa17.09■□□□□ 0.33
PTPN7-216ENST00000492977 TFCP2Q12800 502 aa17.09■□□□□ 0.33
PTPN7-216ENST00000492977 TNNI3KQ59H18 835 aa17.09■□□□□ 0.33
PTPN7-216ENST00000492977 NLRP10Q86W26 655 aa17.09■□□□□ 0.33
PTPN7-216ENST00000492977 EVI5LQ96CN4 794 aa17.09■□□□□ 0.33
PTPN7-216ENST00000492977 CCDC8Q9H0W5 538 aaPredicted RBP17.09■□□□□ 0.33
PTPN7-216ENST00000492977 FPGT-TNNI3KV9GXZ4 949 aa17.09■□□□□ 0.33
PTPN7-216ENST00000492977 RREB1Q92766 1687 aa17.09■□□□□ 0.33
PTPN7-216ENST00000492977 ZNF831Q5JPB2 1677 aa17.08■□□□□ 0.32
PTPN7-216ENST00000492977 CIAO1O76071 339 aa17.08■□□□□ 0.32
PTPN7-216ENST00000492977 MAP4K4O95819 1239 aaPredicted RBP17.08■□□□□ 0.32
PTPN7-216ENST00000492977 CRKLP46109 303 aaKnown RBP17.08■□□□□ 0.32
PTPN7-216ENST00000492977 GPR108Q9NPR9 543 aa17.08■□□□□ 0.32
PTPN7-216ENST00000492977 NUP98P52948 1817 aa17.08■□□□□ 0.32
PTPN7-216ENST00000492977 KCNQ2O43526 872 aa17.07■□□□□ 0.32
PTPN7-216ENST00000492977 CSF1RP07333 972 aa17.07■□□□□ 0.32
PTPN7-216ENST00000492977 MCCP23508 829 aa17.07■□□□□ 0.32
PTPN7-216ENST00000492977 IL15P40933 162 aaPredicted RBP17.07■□□□□ 0.32
PTPN7-216ENST00000492977 ANTXR1Q9H6X2 564 aa17.07■□□□□ 0.32
PTPN7-216ENST00000492977 ITPK1Q13572 414 aa17.06■□□□□ 0.32
PTPN7-216ENST00000492977 CCDC57Q2TAC2 916 aa17.06■□□□□ 0.32
PTPN7-216ENST00000492977 ATG9AQ7Z3C6 839 aa17.06■□□□□ 0.32
PTPN7-216ENST00000492977 ZNF34Q8IZ26 560 aa17.06■□□□□ 0.32
PTPN7-216ENST00000492977 RUFY2Q8WXA3 655 aa17.06■□□□□ 0.32
PTPN7-216ENST00000492977 FAM89AQ96GI7 184 aa17.06■□□□□ 0.32
PTPN7-216ENST00000492977 TBC1D2BQ9UPU7 963 aa17.06■□□□□ 0.32
PTPN7-216ENST00000492977 EYA2O00167 538 aa17.06■□□□□ 0.32
PTPN7-216ENST00000492977 HIP1O00291 1037 aa17.06■□□□□ 0.32
PTPN7-216ENST00000492977 SGSM2O43147 1006 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms